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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.45244 (4 seq.)
>WENV170679588
LFCJ01000053
[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
17251
17336
+
Ser
TGA
[ENA]
¡û
>WENV170702252
LKMJ01001079
[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
23192
23277
+
Ser
TGA
[ENA]
¡û
>W1610682218
LKMN01000003
Euryarchaeota
Nanohaloarchaea archaeon B1-Br10_U2g1 [LKMN]
17251
17336
+
Ser
TGA
[ENA]
¡û
>W1610682377
LKMW01000007
Euryarchaeota
Nanohaloarchaea archaeon PL-Br10_U2g19 [LKMW]
23192
23277
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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