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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.452894 (7 seq.)
>W1910550318
FZQU01000005
Campylobacterota
Helicobacter sp. 'CLO3_human' [FZQU]
280715
280639
-
Arg
TCT
[ENA]
¡û
>W1910550479
FZQY01000004
Campylobacterota
Helicobacter sp. 'house sparrow 1' [FZQY]
280855
280779
-
Arg
TCT
[ENA]
¡û
>W1910584281
JXTW01000001
Campylobacterota
Helicobacter anseris 2013ZJHSD2 [JXTW]
101956
101880
-
Arg
TCT
[ENA]
¡û
>W1810046791
NXLX01000001
Campylobacterota
Helicobacter anseris MIT 04-9362 [NXLX]
90146
90070
-
Arg
TCT
[ENA]
¡û
>W2010431995
FZQU01000005
Campylobacterota
Helicobacter sp. 'CLO3_human' [FZQU]
280715
280639
-
Arg
TCT
[ENA]
¡û
>W2010432102
FZQY01000004
Campylobacterota
Helicobacter sp. 'house sparrow 1' [FZQY]
280855
280779
-
Arg
TCT
[ENA]
¡û
>W2010764093
JXTW01000001
Campylobacterota
Helicobacter anseris 2013ZJHSD2 [JXTW]
101956
101880
-
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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