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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.454691 (6 seq.)
>WENV180658335
OCVV010753655
[OCVV] gut metagenome; gut
161
237
+
Ile
GAT
[ENA]
¡û
>WENV180658336
OCVV010753655
[OCVV] gut metagenome; gut
161
237
+
Ile
GAT
[ENA]
¡û
>WENV180659440
OCVV010860443
[OCVV] gut metagenome; gut
580
504
-
Ile
GAT
[ENA]
¡û
>WENV180659442
OCVV010860443
[OCVV] gut metagenome; gut
580
504
-
Ile
GAT
[ENA]
¡û
>WENV180677037
OCVV011573770
[OCVV] gut metagenome; gut
78
2
-
Ile
GAT
[ENA]
¡û
>WENV180677038
OCVV011573770
[OCVV] gut metagenome; gut
78
2
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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