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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.455739 (6 seq.)
>W1910737559
MHOO01000011
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_39_25 [MHOO]
21485
21413
-
Arg
TCT
[ENA]
¡û
>W1910737939
MHPB01000013
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_40_39 [MHPB]
21530
21458
-
Arg
TCT
[ENA]
¡û
>W1910737999
MHPD01000011
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_02_FULL_39_8 [MHPD]
6306
6378
+
Arg
TCT
[ENA]
¡û
>W2010870989
MHOO01000011
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_39_25 [MHOO]
21485
21413
-
Arg
TCT
[ENA]
¡û
>W2010871369
MHPB01000013
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_40_39 [MHPB]
21530
21458
-
Arg
TCT
[ENA]
¡û
>W2010871429
MHPD01000011
Unclassified
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_02_FULL_39_8 [MHPD]
6306
6378
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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