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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.458382 (80 seq.)
>W1711464278
MJJZ01000002
Campylobacterota
Campylobacter sp. P0021 [MJJZ]
155179
155254
+
Lys
TTT
[ENA]
¡û
>W1711464281
MJJZ01000002
Campylobacterota
Campylobacter sp. P0021 [MJJZ]
155436
155511
+
Lys
TTT
[ENA]
¡û
>W1711464335
MJKA01000003
Campylobacterota
Campylobacter sp. P0023 [MJKA]
92361
92286
-
Lys
TTT
[ENA]
¡û
>W1711464363
MJKB01000001
Campylobacterota
Campylobacter sp. P0085 [MJKB]
255787
255712
-
Lys
TTT
[ENA]
¡û
>W1711464366
MJKB01000001
Campylobacterota
Campylobacter sp. P0085 [MJKB]
255530
255455
-
Lys
TTT
[ENA]
¡û
>W1711464393
MJKC01000003
Campylobacterota
Campylobacter sp. P0087 [MJKC]
106380
106455
+
Lys
TTT
[ENA]
¡û
>W1711464396
MJKC01000003
Campylobacterota
Campylobacter sp. P0087 [MJKC]
106637
106712
+
Lys
TTT
[ENA]
¡û
>W1711464438
MJKD01000004
Campylobacterota
Campylobacter sp. P0088 [MJKD]
99770
99845
+
Lys
TTT
[ENA]
¡û
>W1711464441
MJKD01000004
Campylobacterota
Campylobacter sp. P0088 [MJKD]
100027
100102
+
Lys
TTT
[ENA]
¡û
>W1711464483
MJKE01000004
Campylobacterota
Campylobacter sp. P0094 [MJKE]
97925
98000
+
Lys
TTT
[ENA]
¡û
>W1711464486
MJKE01000004
Campylobacterota
Campylobacter sp. P0094 [MJKE]
98182
98257
+
Lys
TTT
[ENA]
¡û
>W1711464517
MJKF01000001
Campylobacterota
Campylobacter sp. P0098 [MJKF]
92445
92370
-
Lys
TTT
[ENA]
¡û
>W1711464544
MJKG01000001
Campylobacterota
Campylobacter sp. P0103 [MJKG]
429270
429345
+
Lys
TTT
[ENA]
¡û
>W1711464547
MJKG01000001
Campylobacterota
Campylobacter sp. P0103 [MJKG]
429527
429602
+
Lys
TTT
[ENA]
¡û
>W1711464590
MJKH01000001
Campylobacterota
Campylobacter sp. P0106 [MJKH]
94521
94446
-
Lys
TTT
[ENA]
¡û
>W1711464593
MJKH01000001
Campylobacterota
Campylobacter sp. P0106 [MJKH]
94264
94189
-
Lys
TTT
[ENA]
¡û
>W1711464629
MJKI01000001
Campylobacterota
Campylobacter sp. P0107 [MJKI]
296742
296667
-
Lys
TTT
[ENA]
¡û
>W1711464673
MJKJ01000002
Campylobacterota
Campylobacter sp. P0108 [MJKJ]
173325
173400
+
Lys
TTT
[ENA]
¡û
>W1711464699
MJKK01000001
Campylobacterota
Campylobacter sp. P0109 [MJKK]
75135
75060
-
Lys
TTT
[ENA]
¡û
>W1711464702
MJKK01000001
Campylobacterota
Campylobacter sp. P0109 [MJKK]
74878
74803
-
Lys
TTT
[ENA]
¡û
>W1711464789
MJKM01000004
Campylobacterota
Campylobacter sp. P0132 [MJKM]
113171
113096
-
Lys
TTT
[ENA]
¡û
>W1711464792
MJKM01000004
Campylobacterota
Campylobacter sp. P0132 [MJKM]
112914
112839
-
Lys
TTT
[ENA]
¡û
>W1711464821
MJKN01000002
Campylobacterota
Campylobacter sp. P0134 [MJKN]
430084
430159
+
Lys
TTT
[ENA]
¡û
>W1711464824
MJKN01000002
Campylobacterota
Campylobacter sp. P0134 [MJKN]
430341
430416
+
Lys
TTT
[ENA]
¡û
>W1711464863
MJKO01000003
Campylobacterota
Campylobacter sp. P0135 [MJKO]
92874
92799
-
Lys
TTT
[ENA]
¡û
>W1711464866
MJKO01000003
Campylobacterota
Campylobacter sp. P0135 [MJKO]
92617
92542
-
Lys
TTT
[ENA]
¡û
>W1711464901
MJKP01000002
Campylobacterota
Campylobacter sp. P0136 [MJKP]
93177
93102
-
Lys
TTT
[ENA]
¡û
>W1711464904
MJKP01000002
Campylobacterota
Campylobacter sp. P0136 [MJKP]
92920
92845
-
Lys
TTT
[ENA]
¡û
>W1711464946
MJKQ01000007
Campylobacterota
Campylobacter sp. P0138 [MJKQ]
16077
16152
+
Lys
TTT
[ENA]
¡û
>W1711464949
MJKQ01000007
Campylobacterota
Campylobacter sp. P0138 [MJKQ]
16334
16409
+
Lys
TTT
[ENA]
¡û
>W1711464961
MJKR01000002
Campylobacterota
Campylobacter sp. P0139 [MJKR]
103626
103701
+
Lys
TTT
[ENA]
¡û
>W1711464964
MJKR01000002
Campylobacterota
Campylobacter sp. P0139 [MJKR]
103883
103958
+
Lys
TTT
[ENA]
¡û
>W1711465012
MJKS01000001
Campylobacterota
Campylobacter sp. P0140 [MJKS]
255426
255351
-
Lys
TTT
[ENA]
¡û
>W1711465015
MJKS01000001
Campylobacterota
Campylobacter sp. P0140 [MJKS]
255169
255094
-
Lys
TTT
[ENA]
¡û
>W1711465054
MJKT01000003
Campylobacterota
Campylobacter sp. P0187 [MJKT]
93397
93322
-
Lys
TTT
[ENA]
¡û
>W1711465057
MJKT01000003
Campylobacterota
Campylobacter sp. P0187 [MJKT]
93140
93065
-
Lys
TTT
[ENA]
¡û
>W1711465076
MJKU01000001
Campylobacterota
Campylobacter sp. P0209 [MJKU]
421091
421166
+
Lys
TTT
[ENA]
¡û
>W1711465079
MJKU01000001
Campylobacterota
Campylobacter sp. P0209 [MJKU]
421348
421423
+
Lys
TTT
[ENA]
¡û
>W1711465125
MJKV01000002
Campylobacterota
Campylobacter sp. P0222 [MJKV]
93142
93067
-
Lys
TTT
[ENA]
¡û
>W1711465160
MJKW01000002
Campylobacterota
Campylobacter sp. P0227 [MJKW]
93374
93299
-
Lys
TTT
[ENA]
¡û
>W1711465163
MJKW01000002
Campylobacterota
Campylobacter sp. P0227 [MJKW]
93117
93042
-
Lys
TTT
[ENA]
¡û
>W1711465213
MJKX01000004
Campylobacterota
Campylobacter sp. P031 [MJKX]
92426
92351
-
Lys
TTT
[ENA]
¡û
>W1711465216
MJKX01000004
Campylobacterota
Campylobacter sp. P031 [MJKX]
92169
92094
-
Lys
TTT
[ENA]
¡û
>W1711465241
MJKY01000005
Campylobacterota
Campylobacter sp. P090 [MJKY]
106562
106637
+
Lys
TTT
[ENA]
¡û
>W1711465280
MJKZ01000001
Campylobacterota
Campylobacter sp. P091 [MJKZ]
97611
97536
-
Lys
TTT
[ENA]
¡û
>W1711465283
MJKZ01000001
Campylobacterota
Campylobacter sp. P091 [MJKZ]
97354
97279
-
Lys
TTT
[ENA]
¡û
>W1711465305
MJLA01000001
Campylobacterota
Campylobacter sp. P093 [MJLA]
429579
429654
+
Lys
TTT
[ENA]
¡û
>W1711465342
MJLB01000001
Campylobacterota
Campylobacter sp. P146 [MJLB]
156383
156458
+
Lys
TTT
[ENA]
¡û
>W1711465377
MJLB01000017
Campylobacterota
Campylobacter sp. P146 [MJLB]
262
187
-
Lys
TTT
[ENA]
¡û
>W1711465381
MJLC01000001
Campylobacterota
Campylobacter sp. P148 [MJLC]
420403
420478
+
Lys
TTT
[ENA]
¡û
>W1711465429
MJLD01000001
Campylobacterota
Campylobacter sp. P155 [MJLD]
91651
91576
-
Lys
TTT
[ENA]
¡û
>W1711465464
MJLE01000001
Campylobacterota
Campylobacter sp. P157 [MJLE]
260010
259935
-
Lys
TTT
[ENA]
¡û
>W1711465467
MJLE01000001
Campylobacterota
Campylobacter sp. P157 [MJLE]
259753
259678
-
Lys
TTT
[ENA]
¡û
>W1711465513
MJLF01000003
Campylobacterota
Campylobacter sp. P159 [MJLF]
94477
94402
-
Lys
TTT
[ENA]
¡û
>W1711465516
MJLF01000003
Campylobacterota
Campylobacter sp. P159 [MJLF]
94220
94145
-
Lys
TTT
[ENA]
¡û
>W1711465548
MJLG01000004
Campylobacterota
Campylobacter sp. P160 [MJLG]
106294
106369
+
Lys
TTT
[ENA]
¡û
>W1711465579
MJLH01000001
Campylobacterota
Campylobacter sp. P162 [MJLH]
92265
92190
-
Lys
TTT
[ENA]
¡û
>W1711465605
MJLH01000027
Campylobacterota
Campylobacter sp. P162 [MJLH]
257
182
-
Lys
TTT
[ENA]
¡û
>W1711465738
MJLL01000008
Campylobacterota
Campylobacter sp. RM8835 [MJLL]
82514
82589
+
Lys
TTT
[ENA]
¡û
>W1711465755
MJLL01000029
Campylobacterota
Campylobacter sp. RM8835 [MJLL]
8
83
+
Lys
TTT
[ENA]
¡û
>W1711465769
MJLM01000003
Campylobacterota
Campylobacter sp. RM8965 [MJLM]
82382
82457
+
Lys
TTT
[ENA]
¡û
>W1711465772
MJLM01000003
Campylobacterota
Campylobacter sp. RM8965 [MJLM]
82642
82717
+
Lys
TTT
[ENA]
¡û
>W1711465804
MJLN01000005
Campylobacterota
Campylobacter sp. RM8966 [MJLN]
9295
9220
-
Lys
TTT
[ENA]
¡û
>W1711465807
MJLN01000005
Campylobacterota
Campylobacter sp. RM8966 [MJLN]
9035
8960
-
Lys
TTT
[ENA]
¡û
>W1711465845
MJLO01000004
Campylobacterota
Campylobacter sp. RM8970 [MJLO]
81090
81165
+
Lys
TTT
[ENA]
¡û
>W1711465867
MJLP01000002
Campylobacterota
Campylobacter sp. RM9261 [MJLP]
141386
141311
-
Lys
TTT
[ENA]
¡û
>W1711465870
MJLP01000002
Campylobacterota
Campylobacter sp. RM9261 [MJLP]
141126
141051
-
Lys
TTT
[ENA]
¡û
>W1711465913
MJLQ01000006
Campylobacterota
Campylobacter sp. RM9262 [MJLQ]
82232
82307
+
Lys
TTT
[ENA]
¡û
>W1711465945
MJLR01000003
Campylobacterota
Campylobacter sp. RM9263 [MJLR]
141483
141408
-
Lys
TTT
[ENA]
¡û
>W1711465948
MJLR01000003
Campylobacterota
Campylobacter sp. RM9263 [MJLR]
141223
141148
-
Lys
TTT
[ENA]
¡û
>W1711465979
MJLS01000002
Campylobacterota
Campylobacter sp. S0112 [MJLS]
81260
81335
+
Lys
TTT
[ENA]
¡û
>W1711465982
MJLS01000002
Campylobacterota
Campylobacter sp. S0112 [MJLS]
81519
81594
+
Lys
TTT
[ENA]
¡û
>C171083863
CP018788
Campylobacterota
Campylobacter lanienae NCTC 13003 [CP018788]
1119543
1119618
+
Lys
TTT
-
¡û
>C171083866
CP018788
Campylobacterota
Campylobacter lanienae NCTC 13003 [CP018788]
1119800
1119875
+
Lys
TTT
-
¡û
>C171083954
CP018791
Campylobacterota
Campylobacter sp. RM8964 [CP018791]
1139975
1139900
-
Lys
TTT
-
¡û
>C171083957
CP018791
Campylobacterota
Campylobacter sp. RM8964 [CP018791]
1139717
1139642
-
Lys
TTT
-
¡û
>C171083993
CP018793
Campylobacterota
Campylobacter sp. RM12175 [CP018793]
1052785
1052710
-
Lys
TTT
-
¡û
>C171083996
CP018793
Campylobacterota
Campylobacter sp. RM12175 [CP018793]
1052525
1052450
-
Lys
TTT
-
¡û
>WENV170635375
JDSF01007413
[JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA
467
542
+
Lys
TTT
[ENA]
¢þ
>WENV170635423
JDSF01015596
[JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA
279
354
+
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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