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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.458426 (232 seq.)
>W1711078261
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1489
1564
+
Glu
TTC
[ENA]
¡û
>W1711078262
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1710
1785
+
Glu
TTC
[ENA]
¡û
>W1711078263
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1932
2007
+
Glu
TTC
[ENA]
¡û
>W1711078264
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
2100
2175
+
Glu
TTC
[ENA]
¡û
>W131177239
ARKQ01000033
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
131721
131646
-
Glu
TTC
[ENA]
¡û
>W131177240
ARKQ01000033
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
131532
131457
-
Glu
TTC
[ENA]
¡û
>W131177241
ARKQ01000033
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
131337
131262
-
Glu
TTC
[ENA]
¡û
>W131177242
ARKQ01000033
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
131137
131062
-
Glu
TTC
[ENA]
¡û
>W131177243
ARKQ01000033
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
130853
130778
-
Glu
TTC
[ENA]
¡û
>W1711499170
MKQD01000047
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
207
282
+
Glu
TTC
[ENA]
¡û
>W1711499193
MKQD01000081
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
35813
35888
+
Glu
TTC
[ENA]
¡û
>W1711624644
MPHL01000003
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
187330
187405
+
Glu
TTC
[ENA]
¡û
>W1711624645
MPHL01000003
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
187528
187603
+
Glu
TTC
[ENA]
¡û
>W1711624646
MPHL01000003
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
187743
187818
+
Glu
TTC
[ENA]
¡û
>W1711624647
MPHL01000003
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
187906
187981
+
Glu
TTC
[ENA]
¡û
>W1711767416
MUZU01000022
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
17055
17130
+
Glu
TTC
[ENA]
¡û
>W1711767417
MUZU01000022
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
17253
17328
+
Glu
TTC
[ENA]
¡û
>W1711767418
MUZU01000022
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
17468
17543
+
Glu
TTC
[ENA]
¡û
>W1711767419
MUZU01000022
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
17631
17706
+
Glu
TTC
[ENA]
¡û
>W1711767424
MUZV01000002
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
147897
147972
+
Glu
TTC
[ENA]
¡û
>W1711767425
MUZV01000002
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
148118
148193
+
Glu
TTC
[ENA]
¡û
>W1711767426
MUZV01000002
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
148339
148414
+
Glu
TTC
[ENA]
¡û
>W1711767427
MUZV01000002
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
148507
148582
+
Glu
TTC
[ENA]
¡û
>W1711947454
NBOC01000011
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
32818
32743
-
Glu
TTC
[ENA]
¡û
>W1711947455
NBOC01000011
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
32598
32523
-
Glu
TTC
[ENA]
¡û
>W1711947456
NBOC01000011
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
32386
32311
-
Glu
TTC
[ENA]
¡û
>W1711947457
NBOC01000011
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
32214
32139
-
Glu
TTC
[ENA]
¡û
>W1711947481
NBOD01000003
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
232101
232176
+
Glu
TTC
[ENA]
¡û
>W1711947482
NBOD01000003
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
232322
232397
+
Glu
TTC
[ENA]
¡û
>W1711947483
NBOD01000003
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
232543
232618
+
Glu
TTC
[ENA]
¡û
>W1711947484
NBOD01000003
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
232711
232786
+
Glu
TTC
[ENA]
¡û
>W1711947571
NBOE01000007
Gammaproteobacteria
Colwellia polaris [NBOE]
56405
56330
-
Glu
TTC
[ENA]
¡û
>W1711947572
NBOE01000007
Gammaproteobacteria
Colwellia polaris [NBOE]
56184
56109
-
Glu
TTC
[ENA]
¡û
>W1711947573
NBOE01000007
Gammaproteobacteria
Colwellia polaris [NBOE]
55971
55896
-
Glu
TTC
[ENA]
¡û
>W1711947574
NBOE01000007
Gammaproteobacteria
Colwellia polaris [NBOE]
55803
55728
-
Glu
TTC
[ENA]
¡û
>W1711947659
NBOF01000004
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
196104
196179
+
Glu
TTC
[ENA]
¡û
>W1711947660
NBOF01000004
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
196324
196399
+
Glu
TTC
[ENA]
¡û
>W1711947661
NBOF01000004
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
196547
196622
+
Glu
TTC
[ENA]
¡û
>W1711947662
NBOF01000004
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
196717
196792
+
Glu
TTC
[ENA]
¡û
>W1711947723
NBOG01000004
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
153720
153645
-
Glu
TTC
[ENA]
¡û
>W1711947724
NBOG01000004
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
153498
153423
-
Glu
TTC
[ENA]
¡û
>W1711947725
NBOG01000004
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
153287
153212
-
Glu
TTC
[ENA]
¡û
>W1711947726
NBOG01000004
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
153115
153040
-
Glu
TTC
[ENA]
¡û
>C171034511
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
377024
376949
-
Glu
TTC
-
¡û
>C171034512
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
376803
376728
-
Glu
TTC
-
¡û
>C171034513
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
376591
376516
-
Glu
TTC
-
¡û
>C171034514
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
376421
376346
-
Glu
TTC
-
¡û
>C171034546
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
4222440
4222515
+
Glu
TTC
-
¡û
>C171034547
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
4222701
4222776
+
Glu
TTC
-
¡û
>C171034548
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
4222962
4223037
+
Glu
TTC
-
¡û
>C171034549
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
4223223
4223298
+
Glu
TTC
-
¡û
>C171108342
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1108403
1108478
+
Glu
TTC
-
¡û
>C171108343
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1108624
1108699
+
Glu
TTC
-
¡û
>C171108344
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1108836
1108911
+
Glu
TTC
-
¡û
>C171108345
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
1109006
1109081
+
Glu
TTC
-
¡û
>C006851
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2964005
2963930
-
Glu
TTC
[Ensembl]
¡û
>C006852
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2963717
2963642
-
Glu
TTC
[Ensembl]
¡û
>C006853
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2963551
2963476
-
Glu
TTC
[Ensembl]
¡û
>C006854
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2963385
2963310
-
Glu
TTC
[Ensembl]
¡û
>C006855
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2963218
2963143
-
Glu
TTC
[Ensembl]
¡û
>C006856
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
2962930
2962855
-
Glu
TTC
[Ensembl]
¡û
>WENV180585195
OCOK01029712
[OCOK] marine metagenome; ENVO:00002010
237
162
-
Glu
TTC
[ENA]
¢þ
>WENV182540183
OJAE01000902
[OJAE] seawater metagenome; Sea water
310
385
+
Glu
TTC
[ENA]
¢þ
>WENV182540184
OJAE01000902
[OJAE] seawater metagenome; Sea water
531
606
+
Glu
TTC
[ENA]
¢þ
>WENV182540185
OJAE01000902
[OJAE] seawater metagenome; Sea water
744
819
+
Glu
TTC
[ENA]
¢þ
>WENV182541982
OJAV01000135
[OJAV] seawater metagenome; Sea water
21031
20956
-
Glu
TTC
[ENA]
¢þ
>WENV182543636
OJBC01000019
[OJBC] seawater metagenome; Sea water
14178
14103
-
Glu
TTC
[ENA]
¢þ
>WENV182545083
OJBM01000028
[OJBM] seawater metagenome; Sea water
93419
93494
+
Glu
TTC
[ENA]
¢þ
>WENV182545084
OJBM01000028
[OJBM] seawater metagenome; Sea water
93632
93707
+
Glu
TTC
[ENA]
¢þ
>WENV182547059
OJBR01000357
[OJBR] seawater metagenome; Sea water
19460
19535
+
Glu
TTC
[ENA]
¢þ
>WENV182555537
OJDB01004114
[OJDB] seawater metagenome; Sea water
568
493
-
Glu
TTC
[ENA]
¢þ
>WENV182555538
OJDB01004114
[OJDB] seawater metagenome; Sea water
436
361
-
Glu
TTC
[ENA]
¢þ
>WENV182555540
OJDB01004114
[OJDB] seawater metagenome; Sea water
186
111
-
Glu
TTC
[ENA]
¢þ
>WENV182559951
OJDR01000004
[OJDR] seawater metagenome; Sea water
152524
152599
+
Glu
TTC
[ENA]
¢þ
>WENV182567467
OJEO01001600
[OJEO] seawater metagenome; Sea water
727
802
+
Glu
TTC
[ENA]
¢þ
>WENV182567805
OJEP01000297
[OJEP] seawater metagenome; Sea water
509
584
+
Glu
TTC
[ENA]
¢þ
>WENV182568154
OJEQ01003468
[OJEQ] seawater metagenome; Sea water
438
363
-
Glu
TTC
[ENA]
¢þ
>WENV182568155
OJEQ01003468
[OJEQ] seawater metagenome; Sea water
270
195
-
Glu
TTC
[ENA]
¢þ
>WENV182568221
OJER01006239
[OJER] seawater metagenome; Sea water
314
389
+
Glu
TTC
[ENA]
¢þ
>WENV182568272
OJET01000015
[OJET] seawater metagenome; Sea water
192
267
+
Glu
TTC
[ENA]
¢þ
>WENV182568575
OJEV01007563
[OJEV] seawater metagenome; Sea water
3
78
+
Glu
TTC
[ENA]
¢þ
>WENV182568576
OJEV01007563
[OJEV] seawater metagenome; Sea water
171
246
+
Glu
TTC
[ENA]
¢þ
>WENV182568577
OJEV01007563
[OJEV] seawater metagenome; Sea water
392
467
+
Glu
TTC
[ENA]
¢þ
>WENV182568578
OJEV01007563
[OJEV] seawater metagenome; Sea water
614
689
+
Glu
TTC
[ENA]
¢þ
>WENV182568856
OJEX01000135
[OJEX] seawater metagenome; Sea water
18038
18113
+
Glu
TTC
[ENA]
¢þ
>WENV182573336
OJFP01000877
[OJFP] seawater metagenome; Sea water
13909
13834
-
Glu
TTC
[ENA]
¢þ
>WENV182576529
OJFX01055766
[OJFX] seawater metagenome; Sea water
511
436
-
Glu
TTC
[ENA]
¢þ
>WENV182576530
OJFX01055766
[OJFX] seawater metagenome; Sea water
290
215
-
Glu
TTC
[ENA]
¢þ
>WENV182576531
OJFX01055766
[OJFX] seawater metagenome; Sea water
77
2
-
Glu
TTC
[ENA]
¢þ
>WENV182576938
OJGB01001550
[OJGB] seawater metagenome; Sea water
283
358
+
Glu
TTC
[ENA]
¢þ
>WENV182576939
OJGB01001550
[OJGB] seawater metagenome; Sea water
549
624
+
Glu
TTC
[ENA]
¢þ
>WENV182578754
OJGP01001364
[OJGP] seawater metagenome; Sea water
718
793
+
Glu
TTC
[ENA]
¢þ
>WENV182579717
OJGT01000019
[OJGT] seawater metagenome; Sea water
85816
85891
+
Glu
TTC
[ENA]
¢þ
>WENV182584375
OJHG01000075
[OJHG] seawater metagenome; Sea water
52436
52511
+
Glu
TTC
[ENA]
¢þ
>WENV182588017
OJHO01000870
[OJHO] seawater metagenome; Sea water
7817
7742
-
Glu
TTC
[ENA]
¢þ
>WENV182588325
OJHR01002978
[OJHR] seawater metagenome; Sea water
327
252
-
Glu
TTC
[ENA]
¢þ
>WENV182588726
OJHW01009853
[OJHW] seawater metagenome; Sea water
308
383
+
Glu
TTC
[ENA]
¢þ
>WENV182590603
OJIJ01000210
[OJIJ] seawater metagenome; Sea water
6289
6364
+
Glu
TTC
[ENA]
¢þ
>WENV182591745
OJIO01003290
[OJIO] seawater metagenome; Sea water
4423
4348
-
Glu
TTC
[ENA]
¢þ
>WENV182592615
OJIR01005814
[OJIR] seawater metagenome; Sea water
260
335
+
Glu
TTC
[ENA]
¢þ
>WENV182594044
OJIV01000126
[OJIV] seawater metagenome; Sea water
28903
28978
+
Glu
TTC
[ENA]
¢þ
>WENV183053745
OLGQ01002467
[OLGQ] seawater metagenome; Sea water
364
439
+
Glu
TTC
[ENA]
¢þ
>WENV183053746
OLGQ01002467
[OLGQ] seawater metagenome; Sea water
585
660
+
Glu
TTC
[ENA]
¢þ
>WENV183055682
OLHF01000044
[OLHF] seawater metagenome; Sea water
30483
30558
+
Glu
TTC
[ENA]
¢þ
>WENV183056165
OLHI01000590
[OLHI] seawater metagenome; Sea water
6926
6851
-
Glu
TTC
[ENA]
¢þ
>WENV183056181
OLHI01000864
[OLHI] seawater metagenome; Sea water
245
170
-
Glu
TTC
[ENA]
¢þ
>WENV183060028
OLHW01004981
[OLHW] seawater metagenome; Sea water
266
191
-
Glu
TTC
[ENA]
¢þ
>WENV183522162
OMOM01000328
[OMOM] seawater metagenome; Sea water
16613
16688
+
Glu
TTC
[ENA]
¢þ
>WENV170538185
CEWR01059588
[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
4463
4388
-
Glu
TTC
[ENA]
¢þ
>WENV170600911
FUWD010147775
[FUWD] metagenome; unknown
84
9
-
Glu
TTC
[ENA]
¢þ
>WENV170780330
MAAA01028700
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
990
1065
+
Glu
TTC
[ENA]
¢þ
>WENV170780432
MAAB01001205
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65952
65877
-
Glu
TTC
[ENA]
¢þ
>WENV170780433
MAAB01001205
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65764
65689
-
Glu
TTC
[ENA]
¢þ
>WENV170780434
MAAB01001205
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65563
65488
-
Glu
TTC
[ENA]
¢þ
>WENV170780435
MAAB01001205
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65287
65212
-
Glu
TTC
[ENA]
¢þ
>WENV170780480
MAAB01001520
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
116
191
+
Glu
TTC
[ENA]
¢þ
>WENV170780681
MAAB01013663
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
43
118
+
Glu
TTC
[ENA]
¢þ
>WENV170780749
MAAB01018950
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
883
958
+
Glu
TTC
[ENA]
¢þ
>WENV170780750
MAAB01018950
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1157
1231
+
Glu
TTC
[ENA]
¢þ
>WENV170780977
MAAB01028907
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
29051
29126
+
Glu
TTC
[ENA]
¢þ
>WENV170780978
MAAB01028907
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
29312
29387
+
Glu
TTC
[ENA]
¢þ
>WENV170780979
MAAB01028907
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
29617
29692
+
Glu
TTC
[ENA]
¢þ
>WENV170781025
MAAB01029104
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
27427
27352
-
Glu
TTC
[ENA]
¢þ
>WENV170781026
MAAB01029104
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
27179
27104
-
Glu
TTC
[ENA]
¢þ
>WENV170781027
MAAB01029104
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
26994
26919
-
Glu
TTC
[ENA]
¢þ
>WENV170781028
MAAB01029104
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
26691
26616
-
Glu
TTC
[ENA]
¢þ
>WENV170781042
MAAB01029165
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
9000
9075
+
Glu
TTC
[ENA]
¢þ
>WENV170781043
MAAB01029165
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
9191
9266
+
Glu
TTC
[ENA]
¢þ
>WENV170781124
MAAB01029444
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
96975
96900
-
Glu
TTC
[ENA]
¢þ
>WENV170781125
MAAB01029444
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
96796
96721
-
Glu
TTC
[ENA]
¢þ
>WENV170781126
MAAB01029444
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
96509
96434
-
Glu
TTC
[ENA]
¢þ
>WENV170781156
MAAB01029578
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
68576
68501
-
Glu
TTC
[ENA]
¢þ
>WENV170781157
MAAB01029578
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
68292
68217
-
Glu
TTC
[ENA]
¢þ
>WENV170781173
MAAB01029608
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
12437
12512
+
Glu
TTC
[ENA]
¢þ
>WENV170781174
MAAB01029608
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
12616
12691
+
Glu
TTC
[ENA]
¢þ
>WENV170781175
MAAB01029608
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
12883
12958
+
Glu
TTC
[ENA]
¢þ
>WENV170781192
MAAB01029654
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
31670
31745
+
Glu
TTC
[ENA]
¢þ
>WENV170781193
MAAB01029654
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
31935
32010
+
Glu
TTC
[ENA]
¢þ
>WENV170781194
MAAB01029654
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
32181
32256
+
Glu
TTC
[ENA]
¢þ
>WENV170781613
MAAB01038734
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
3499
3574
+
Glu
TTC
[ENA]
¢þ
>WENV170781614
MAAB01038734
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
3683
3758
+
Glu
TTC
[ENA]
¢þ
>WENV170782449
MAAC01009951
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
54605
54530
-
Glu
TTC
[ENA]
¢þ
>WENV170782450
MAAC01009951
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
54369
54294
-
Glu
TTC
[ENA]
¢þ
>WENV170782451
MAAC01009951
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
54102
54027
-
Glu
TTC
[ENA]
¢þ
>WENV170782452
MAAC01009951
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
53835
53760
-
Glu
TTC
[ENA]
¢þ
>WENV170782489
MAAC01010159
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
37105
37180
+
Glu
TTC
[ENA]
¢þ
>WENV170782490
MAAC01010159
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
37366
37441
+
Glu
TTC
[ENA]
¢þ
>WENV170782491
MAAC01010159
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
37671
37746
+
Glu
TTC
[ENA]
¢þ
>WENV170782510
MAAC01010172
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
170619
170544
-
Glu
TTC
[ENA]
¢þ
>WENV170782511
MAAC01010172
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
170440
170365
-
Glu
TTC
[ENA]
¢þ
>WENV170782512
MAAC01010172
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
170172
170097
-
Glu
TTC
[ENA]
¢þ
>WENV170782903
MAAC01011996
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
27933
27858
-
Glu
TTC
[ENA]
¢þ
>WENV170782952
MAAC01012150
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
3181
3106
-
Glu
TTC
[ENA]
¢þ
>WENV170782953
MAAC01012150
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2920
2845
-
Glu
TTC
[ENA]
¢þ
>WENV170782954
MAAC01012150
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2617
2542
-
Glu
TTC
[ENA]
¢þ
>WENV170783145
MAAC01014289
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2940
3015
+
Glu
TTC
[ENA]
¢þ
>WENV170783158
MAAC01014487
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
5750
5675
-
Glu
TTC
[ENA]
¢þ
>WENV170783159
MAAC01014487
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
5466
5391
-
Glu
TTC
[ENA]
¢þ
>WENV170783189
MAAC01014783
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
194
119
-
Glu
TTC
[ENA]
¢þ
>WENV170783235
MAAC01015216
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
7160
7235
+
Glu
TTC
[ENA]
¢þ
>WENV170823430
MDSY01057392
[MDSY] marine metagenome; seawater
13
88
+
Glu
TTC
[ENA]
¢þ
>WENV170825107
MDSY01087489
[MDSY] marine metagenome; seawater
78
3
-
Glu
TTC
[ENA]
¢þ
>C181169922
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1370037
1370112
+
Glu
TTC
-
¡û
>C181169923
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1370258
1370333
+
Glu
TTC
-
¡û
>C181169924
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1370639
1370714
+
Glu
TTC
-
¡û
>C191128339
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1778037
1778112
+
Glu
TTC
-
¡û
>C191128340
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1778263
1778338
+
Glu
TTC
-
¡û
>C191128341
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1778474
1778549
+
Glu
TTC
-
¡û
>C191128342
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1778687
1778762
+
Glu
TTC
-
¡û
>C191128343
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1778859
1778934
+
Glu
TTC
-
¡û
>C191130502
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
571079
571004
-
Glu
TTC
-
¡û
>C191130503
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
570851
570776
-
Glu
TTC
-
¡û
>C191130504
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
570640
570565
-
Glu
TTC
-
¡û
>C191130505
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
570429
570354
-
Glu
TTC
-
¡û
>W1911770208
QXIO01000002
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
274587
274512
-
Glu
TTC
[ENA]
¡û
>W1911770209
QXIO01000002
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
274373
274298
-
Glu
TTC
[ENA]
¡û
>W1911770210
QXIO01000002
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
274134
274059
-
Glu
TTC
[ENA]
¡û
>W1911770211
QXIO01000002
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
273891
273816
-
Glu
TTC
[ENA]
¡û
>W1810155085
PJAI01000030
Gammaproteobacteria
Colwellia echini A3T [PJAI]
108276
108351
+
Glu
TTC
[ENA]
¡û
>W1810155086
PJAI01000030
Gammaproteobacteria
Colwellia echini A3T [PJAI]
108481
108556
+
Glu
TTC
[ENA]
¡û
>W1810155087
PJAI01000030
Gammaproteobacteria
Colwellia echini A3T [PJAI]
108674
108749
+
Glu
TTC
[ENA]
¡û
>W1810155088
PJAI01000030
Gammaproteobacteria
Colwellia echini A3T [PJAI]
108868
108943
+
Glu
TTC
[ENA]
¡û
>W1810155089
PJAI01000030
Gammaproteobacteria
Colwellia echini A3T [PJAI]
109117
109192
+
Glu
TTC
[ENA]
¡û
>W1810155330
PJAQ01000010
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
26518
26593
+
Glu
TTC
[ENA]
¡û
>W1810155331
PJAQ01000010
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
26701
26776
+
Glu
TTC
[ENA]
¡û
>W1810155332
PJAQ01000010
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
26880
26955
+
Glu
TTC
[ENA]
¡û
>W1810155333
PJAQ01000010
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
27058
27133
+
Glu
TTC
[ENA]
¡û
>W1810155334
PJAQ01000010
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
27322
27397
+
Glu
TTC
[ENA]
¡û
>W1810155524
PJAU01000005
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
205
280
+
Glu
TTC
[ENA]
¡û
>W1810155525
PJAU01000008
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
454
379
-
Glu
TTC
[ENA]
¡û
>W1810155526
PJAU01000008
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
258
183
-
Glu
TTC
[ENA]
¡û
>W1810155559
PJAU01000049
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
243
168
-
Glu
TTC
[ENA]
¡û
>W1810156000
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1160315
1160390
+
Glu
TTC
[ENA]
¡û
>W1810156001
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1160603
1160678
+
Glu
TTC
[ENA]
¡û
>W1810156002
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1160769
1160844
+
Glu
TTC
[ENA]
¡û
>W1810156003
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1160935
1161010
+
Glu
TTC
[ENA]
¡û
>W1810156004
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1161102
1161177
+
Glu
TTC
[ENA]
¡û
>W1810156005
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1161390
1161465
+
Glu
TTC
[ENA]
¡û
>W1810735910
QOLD01000081
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
59625
59550
-
Glu
TTC
[ENA]
¡û
>W1810735911
QOLD01000081
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
59470
59395
-
Glu
TTC
[ENA]
¡û
>W1810735912
QOLD01000081
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
59203
59128
-
Glu
TTC
[ENA]
¡û
>W1511322883
JQEC01000029
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
106512
106437
-
Glu
TTC
[ENA]
¡û
>W1511322884
JQEC01000029
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
106326
106251
-
Glu
TTC
[ENA]
¡û
>W1511322885
JQEC01000029
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
106120
106045
-
Glu
TTC
[ENA]
¡û
>W1511322886
JQEC01000029
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
105914
105839
-
Glu
TTC
[ENA]
¡û
>W1511322887
JQEC01000029
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
105639
105564
-
Glu
TTC
[ENA]
¡û
>W1511322965
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94840
94765
-
Glu
TTC
[ENA]
¡û
>W1511322966
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94573
94498
-
Glu
TTC
[ENA]
¡û
>W1511322967
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94325
94250
-
Glu
TTC
[ENA]
¡û
>W1511322968
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94162
94087
-
Glu
TTC
[ENA]
¡û
>W1511322969
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
93999
93924
-
Glu
TTC
[ENA]
¡û
>W1511322970
JQED01000024
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
93715
93640
-
Glu
TTC
[ENA]
¡û
>W1511533760
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
1381
1306
-
Glu
TTC
[ENA]
¡û
>W1511533761
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
1268
1193
-
Glu
TTC
[ENA]
¡û
>W1511533762
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
1153
1078
-
Glu
TTC
[ENA]
¡û
>W1511533763
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
1047
972
-
Glu
TTC
[ENA]
¡û
>W1511533764
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
916
841
-
Glu
TTC
[ENA]
¡û
>W1511533766
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
635
560
-
Glu
TTC
[ENA]
¡û
>W1511533768
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
373
298
-
Glu
TTC
[ENA]
¡û
>W1511533770
JYNI01000059
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
127
52
-
Glu
TTC
[ENA]
¡û
>W1511533845
JYNJ01000169
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
208
283
+
Glu
TTC
[ENA]
¡û
>W1511533847
JYNJ01000169
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
478
553
+
Glu
TTC
[ENA]
¡û
>W1511533849
JYNJ01000169
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
723
798
+
Glu
TTC
[ENA]
¡û
>W1511533859
JYNJ01000232
Gammaproteobacteria
Thalassomonas viridans XOM25 [JYNJ]
130
55
-
Glu
TTC
[ENA]
¡û
>W1610917277
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1489
1564
+
Glu
TTC
[ENA]
¡û
>W1610917278
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1710
1785
+
Glu
TTC
[ENA]
¡û
>W1610917279
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1932
2007
+
Glu
TTC
[ENA]
¡û
>W1610917280
LSMS01000087
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
2100
2175
+
Glu
TTC
[ENA]
¡û
>W1710545260
FOBI01000011
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
84849
84924
+
Glu
TTC
[ENA]
¡û
>W1710545261
FOBI01000011
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
85069
85144
+
Glu
TTC
[ENA]
¡û
>W1710545262
FOBI01000011
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
85241
85316
+
Glu
TTC
[ENA]
¡û
>W1710553208
FOHK01000006
Gammaproteobacteria
Thalassotalea agarivorans [FOHK]
171248
171173
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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