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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.458780 (114 seq.)
>W1710875351
LMOI01000002
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
31054
31127
+
Thr
CGT
[ENA]
¡û
>W1710875531
LMOL01000022
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
51924
51851
-
Thr
CGT
[ENA]
¡û
>W1710875602
LMON01000002
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
89363
89290
-
Thr
CGT
[ENA]
¡û
>W1710876285
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
37288
37361
+
Thr
CGT
[ENA]
¡û
>W1710880040
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
34523
34598
+
Thr
CGT
[ENA]
¡û
>W1710880252
LMSF01000006
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
30908
30981
+
Thr
CGT
[ENA]
¡û
>W1710880303
LMSG01000004
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
29124
29197
+
Thr
CGT
[ENA]
¡û
>W1710880341
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
36287
36362
+
Thr
CGT
[ENA]
¡û
>W1710880392
LMSI01000002
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
218196
218123
-
Thr
CGT
[ENA]
¡û
>W1710909448
LNQM01000007
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
31394
31467
+
Thr
CGT
[ENA]
¡û
>W1710916235
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
372271
372198
-
Thr
CGT
[ENA]
¡û
>W1710995739
LQAP01000009
Actinomycetota
Arthrobacter sp. B6 [LQAP]
121519
121592
+
Thr
CGT
[ENA]
¡û
>W1711124373
LUKB01000015
Actinomycetota
Arthrobacter sp. D2 [LUKB]
65190
65115
-
Thr
CGT
[ENA]
¡û
>W1711124443
LUKC01000048
Actinomycetota
Arthrobacter sp. D4 [LUKC]
65190
65115
-
Thr
CGT
[ENA]
¡û
>W1711184089
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
967687
967614
-
Thr
CGT
[ENA]
¡û
>W1711724067
MTPV01000034
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
20437
20512
+
Thr
CGT
[ENA]
¡û
>W1711768843
MVDG01000074
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
238577
238502
-
Thr
CGT
[ENA]
¡û
>W1711853242
MYFE01000507
Actinomycetota
Arthrobacter globiformis [MYFE]
2699
2626
-
Thr
CGT
[ENA]
¡û
>C171062241
CP017421
Actinomycetota
Arthrobacter sp. ZXY-2 [CP017421]
3278378
3278451
+
Thr
CGT
-
¡û
>C171091981
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
1521050
1521123
+
Thr
CGT
-
¡û
>W131089928
AOFD01000013
Actinomycetota
Arthrobacter nitrophenolicus SJCon [AOFD]
30697
30770
+
Thr
CGT
[ENA]
¡û
>W131172035
ARGQ01000030
Actinomycetota
Arthrobacter sp. 135MFCol5.1 [ARGQ]
29221
29294
+
Thr
CGT
[ENA]
¡û
>W131172159
ARGS01000038
Actinomycetota
Arthrobacter sp. 162MFSha1.1 [ARGS]
30950
31023
+
Thr
CGT
[ENA]
¡û
>W131172267
ARGU01000041
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
37012
37085
+
Thr
CGT
[ENA]
¡û
>C000090
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
930743
930671
-
Thr
CGT
[Ensembl]
¡û
>C001027
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
760820
760748
-
Thr
CGT
[Ensembl]
¡û
>WENV180016386
FSUT01000619
[FSUT] metagenome; soil
13
86
+
Thr
CGT
[ENA]
¢þ
>WENV180018463
FSZH01000604
[FSZH] metagenome; soil
4197
4270
+
Thr
CGT
[ENA]
¢þ
>WENV180019656
FTCF01000406
[FTCF] metagenome; soil
1557
1630
+
Thr
CGT
[ENA]
¢þ
>W141065988
AQRI01000008
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
221739
221664
-
Thr
CGT
[ENA]
¡û
>WENV180694388
OCZS012260252
[OCZS] soil metagenome; soil
126
53
-
Thr
CGT
[ENA]
¢þ
>W141106093
AVPD01000031
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
12899
12826
-
Thr
CGT
[ENA]
¡û
>WENV181191267
OEPS010047434
[OEPS] soil metagenome; soil
700
773
+
Thr
CGT
[ENA]
¢þ
>W08008067
ABKU01000036
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [ABKU]
17241
17314
+
Thr
CGT
[ENA]
¡û
>W141216740
AZVC01000015
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
32256
32329
+
Thr
CGT
[ENA]
¡û
>W141217172
AZVJ01000025
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
32153
32226
+
Thr
CGT
[ENA]
¡û
>W141246983
CAQI01000051
Actinomycetota
Pseudarthrobacter siccitolerans [CAQI]
30786
30859
+
Thr
CGT
[ENA]
¡û
>W141278877
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
3318965
3318892
-
Thr
CGT
[ENA]
¡û
>WENV170662664
JXWW01131691
[JXWW] soil metagenome; rice field; organic GM Plot
185
260
+
Thr
CGT
[ENA]
¢þ
>C181000333
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
596982
596909
-
Thr
CGT
-
¡û
>C181064996
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
963597
963524
-
Thr
CGT
-
¡û
>W09102054
AAHG01000008
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
127247
127174
-
Thr
CGT
[ENA]
¡û
>C181134240
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
710978
710905
-
Thr
CGT
-
¡û
>C191174077
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
839425
839352
-
Thr
CGT
-
¡û
>C191188212
CP041187
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502771 [CP041187]
268921
268994
+
Thr
CGT
-
¡û
>C191188304
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
1289939
1289866
-
Thr
CGT
-
¡û
>C191188556
CP041198
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502770 [CP041198]
182741
182668
-
Thr
CGT
-
¡û
>W141702018
JMLE01000011
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
31449
31522
+
Thr
CGT
[ENA]
¡û
>W1910181594
BJMD01000023
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
74193
74120
-
Thr
CGT
[ENA]
¡û
>C09100291
CP001341
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [CP001341]
913011
912938
-
Thr
CGT
[Ensembl]
¡û
>W1911532761
OIVI01000405
Actinomycetota
Arthrobacter alpinus [OIVI]
9996
10069
+
Thr
CGT
[ENA]
¡û
>W1911566801
PCPC01000011
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
116959
116886
-
Thr
CGT
[ENA]
¡û
>W1911567570
PCPR01000009
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
114088
114015
-
Thr
CGT
[ENA]
¡û
>W1810167241
PJII01000003
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
30746
30819
+
Thr
CGT
[ENA]
¡û
>W1810167363
PJIK01000018
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
31890
31963
+
Thr
CGT
[ENA]
¡û
>W1810167396
PJIL01000007
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
31514
31587
+
Thr
CGT
[ENA]
¡û
>W1810167901
PJIV01000015
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
63502
63429
-
Thr
CGT
[ENA]
¡û
>W1810167949
PJIW01000021
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
61388
61315
-
Thr
CGT
[ENA]
¡û
>W1810171965
PJMB01000005
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
295969
295896
-
Thr
CGT
[ENA]
¡û
>W1810172011
PJMC01000008
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
31839
31912
+
Thr
CGT
[ENA]
¡û
>W1810296169
PTJB01000014
Actinomycetota
Arthrobacter sp. B3 [PTJB]
31041
31114
+
Thr
CGT
[ENA]
¡û
>W1810368352
PVZO01000016
Actinomycetota
Arthrobacter woluwensis NM-35 [PVZO]
31534
31607
+
Thr
CGT
[ENA]
¡û
>W1810474973
QAIQ01000391
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
7571
7498
-
Thr
CGT
[ENA]
¡û
>W1810569959
QEHL01000004
Actinomycetota
Pseudarthrobacter sp. AG30 [QEHL]
28950
29023
+
Thr
CGT
[ENA]
¡û
>W1810676816
QKMG01000006
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
231442
231369
-
Thr
CGT
[ENA]
¡û
>W1810677262
QKMO01000010
Actinomycetota
Arthrobacter sp. RC1.1 241 [QKMO]
87354
87281
-
Thr
CGT
[ENA]
¡û
>W1810695533
QLNP01000003
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
31775
31848
+
Thr
CGT
[ENA]
¡û
>W1810707041
QMKP01000004
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
249923
249850
-
Thr
CGT
[ENA]
¡û
>W1810789466
QRGQ01000036
Actinomycetota
Arthrobacter sp. RT-1 [QRGQ]
55214
55141
-
Thr
CGT
[ENA]
¡û
>W1510018513
BBUD01000519
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
6312
6237
-
Thr
CGT
[ENA]
¡û
>C11101025
CP002379
Actinomycetota
Pseudarthrobacter phenanthrenivorans Sphe3 [CP002379]
780528
780455
-
Thr
CGT
[Ensembl]
¡û
>W1510641758
CVLG01000001
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
1269756
1269683
-
Thr
CGT
[ENA]
¡û
>W1511319606
JPZK01000013
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
223912
223839
-
Thr
CGT
[ENA]
¡û
>W1511489615
JWTB01000017
Actinomycetota
Pseudarthrobacter phenanthrenivorans SWC37 [JWTB]
78748
78675
-
Thr
CGT
[ENA]
¡û
>W1511523707
JYCN01000008
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
34615
34542
-
Thr
CGT
[ENA]
¡û
>W1511551608
JZTW01000002
Actinomycetota
Pseudarthrobacter chlorophenolicus Mor30.16 [JZTW]
6976
7049
+
Thr
CGT
[ENA]
¡û
>W1511685692
LFQH01000050
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
58278
58205
-
Thr
CGT
[ENA]
¡û
>C161001310
AP014719
Actinomycetota
Arthrobacter sp. Hiyo8 [AP014719]
1854241
1854316
+
Thr
CGT
-
¡û
>C161060718
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
1516418
1516491
+
Thr
CGT
[Ensembl]
¡û
>C161068088
CP014196
Actinomycetota
Arthrobacter sp. ATCC 21022 [CP014196]
801508
801435
-
Thr
CGT
-
¡û
>W121086799
AKKK01000009
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
32878
32951
+
Thr
CGT
[ENA]
¡û
>W121123799
BAEG01000047
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
31956
32029
+
Thr
CGT
[ENA]
¡û
>W1610050314
BBFS01000016
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
17275
17348
+
Thr
CGT
[ENA]
¡û
>W1610067364
BCQN01000005
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
189319
189246
-
Thr
CGT
[ENA]
¡û
>W1610081895
BDDW01000006
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
154721
154648
-
Thr
CGT
[ENA]
¡û
>C131002338
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
886282
886209
-
Thr
CGT
[Ensembl]
¡û
>W1610515430
FMAZ01000006
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
31394
31467
+
Thr
CGT
[ENA]
¡û
>W1610527129
JPWK01000025
Actinomycetota
Arthrobacter sp. ATCC 21022 ATCC 21022 KY 3901 [JPWK]
27844
27771
-
Thr
CGT
[ENA]
¡û
>W1610737697
LMOI01000002
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
31054
31127
+
Thr
CGT
[ENA]
¡û
>W1610737877
LMOL01000022
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
51924
51851
-
Thr
CGT
[ENA]
¡û
>W1610737948
LMON01000002
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
89363
89290
-
Thr
CGT
[ENA]
¡û
>W1610738631
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
37288
37361
+
Thr
CGT
[ENA]
¡û
>W1610742386
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
34523
34598
+
Thr
CGT
[ENA]
¡û
>W1610742598
LMSF01000006
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
30908
30981
+
Thr
CGT
[ENA]
¡û
>W1610742649
LMSG01000004
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
29124
29197
+
Thr
CGT
[ENA]
¡û
>W1610742687
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
36287
36362
+
Thr
CGT
[ENA]
¡û
>W1610742738
LMSI01000002
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
218196
218123
-
Thr
CGT
[ENA]
¡û
>W1610767807
LNQM01000007
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
31394
31467
+
Thr
CGT
[ENA]
¡û
>W1610774474
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
372271
372198
-
Thr
CGT
[ENA]
¡û
>W1610850396
LQAP01000009
Actinomycetota
Arthrobacter sp. B6 [LQAP]
121519
121592
+
Thr
CGT
[ENA]
¡û
>W1610989971
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
967687
967614
-
Thr
CGT
[ENA]
¡û
>W1710046713
BBFS01000016
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
17275
17348
+
Thr
CGT
[ENA]
¡û
>W1710064737
BCQN01000005
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
189319
189246
-
Thr
CGT
[ENA]
¡û
>W1710080610
BDDW01000006
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
154721
154648
-
Thr
CGT
[ENA]
¡û
>W1710084511
BDMH01000005
Actinomycetota
Paenarthrobacter ureafaciens KI72 [BDMH]
294969
294896
-
Thr
CGT
[ENA]
¡û
>W1710501120
FMAZ01000006
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
31394
31467
+
Thr
CGT
[ENA]
¡û
>W1710508518
FMWE01000006
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
33633
33706
+
Thr
CGT
[ENA]
¡û
>W1710527667
FNLE01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus [FNLE]
4274316
4274389
+
Thr
CGT
[ENA]
¡û
>W1710529020
FNNR01000007
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
36636
36709
+
Thr
CGT
[ENA]
¡û
>W1710535438
FNSN01000004
Actinomycetota
Arthrobacter woluwensis [FNSN]
66057
66130
+
Thr
CGT
[ENA]
¡û
>W1710541452
FNYI01000009
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
36643
36716
+
Thr
CGT
[ENA]
¡û
>W1710550096
FOEZ01000016
Actinomycetota
Arthrobacter sp. OV608 [FOEZ]
62811
62738
-
Thr
CGT
[ENA]
¡û
>W1710603439
FUZB01000005
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
36942
37015
+
Thr
CGT
[ENA]
¡û
>W1710605047
FVZL01000014
Actinomycetota
Arthrobacter sp. P2b [FVZL]
31041
31114
+
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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