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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.45898 (209 seq.)
>W1710863531
LMFE01000011
Actinomycetota
Nocardia sp. Root136 [LMFE]
141369
141280
-
Ser
GCT
[ENA]
¡û
>W1710891778
LNDA01000063
Actinomycetota
Nocardia jinanensis NBRC 108249 [LNDA]
23316
23405
+
Ser
GCT
[ENA]
¡û
>W1710935829
LOKT01000009
Actinomycetota
Nocardia donostiensis [LOKT]
61071
61160
+
Ser
GCT
[ENA]
¡û
>W1711008444
LQPZ01000015
Actinomycetota
Mycolicibacillus trivialis triviale [LQPZ]
687
598
-
Ser
GCT
[ENA]
¡û
>W1711049875
LRRB01000228
Actinomycetota
Aldersonia kunmingensis [LRRB]
9530
9619
+
Ser
GCT
[ENA]
¡û
>W1711050379
LRRM01000002
Actinomycetota
Nocardia brasiliensis [LRRM]
241119
241030
-
Ser
GCT
[ENA]
¡û
>W1711178442
LWGR01000021
Actinomycetota
Nocardia terpenica [LWGR]
469357
469446
+
Ser
GCT
[ENA]
¡û
>W1711276577
LZIG01000088
Actinomycetota
Mycobacterium sp. 852002-51759_SCH5129042 [LZIG]
1574
1485
-
Ser
GCT
[ENA]
¡û
>W1711280443
LZLJ01000062
Actinomycetota
Mycobacterium sp. 1274756.6 [LZLJ]
219030
218941
-
Ser
GCT
[ENA]
¡û
>W1711281735
LZMK01000334
Actinomycetota
Nocardia sp. 852002-20019_SCH5090214 [LZMK]
23265
23354
+
Ser
GCT
[ENA]
¡û
>W1711281747
LZML01000011
Actinomycetota
Nocardia sp. 852002-51101_SCH5132738 [LZML]
1561
1472
-
Ser
GCT
[ENA]
¡û
>W1711285858
LZSP01000172
Actinomycetota
Nocardia sp. 852002-51244_SCH5132740 [LZSP]
22860
22949
+
Ser
GCT
[ENA]
¡û
>W131179971
ARMU01000003
Actinomycetota
Nocardia sp. BMG111209 [ARMU]
903690
903601
-
Ser
GCT
[ENA]
¡û
>W1711428367
MIHD01000034
Actinomycetota
Mycolicibacillus koreensis triviale [MIHD]
8673
8762
+
Ser
GCT
[ENA]
¡û
>W1711739120
MUBO01000379
Actinomycetota
Streptomyces daghestanicus [MUBO]
13201
13290
+
Ser
GCT
[ENA]
¡û
>W1711747335
MUKP01000064
Actinomycetota
Nocardia donostiensis [MUKP]
774
685
-
Ser
GCT
[ENA]
¡û
>W1711750431
MUMY01000024
Actinomycetota
Nocardia donostiensis [MUMY]
32528
32617
+
Ser
GCT
[ENA]
¡û
>W1711966754
NCXO01000071
Actinomycetota
Mycolicibacillus koreensis koreense [NCXO]
7634
7723
+
Ser
GCT
[ENA]
¡û
>PL171001802
LN868939
Actinobacteria
Nocardia farcinica NCTC11134 plasmid:2
508207
508296
+
Ser
GCT
[ENA]
¡û
>C171072521
CP018082
Actinomycetota
Nocardia mangyaensis Y48 [CP018082]
232601
232690
+
Ser
GCT
-
¡û
>C014860
AP006618
Actinomycetota
Nocardia farcinica IFM 10152 [AP006618]
239670
239581
-
Ser
GCT
[Ensembl]
¡û
>WENV180031864
FTJU01000135
[FTJU] metagenome; soil
1575
1486
-
Ser
GCT
[ENA]
¢þ
>WENV180031947
FTJU01001894
[FTJU] metagenome; soil
13825
13736
-
Ser
GCT
[ENA]
¢þ
>WENV180032376
FTJZ01024330
[FTJZ] metagenome; soil
219
130
-
Ser
GCT
[ENA]
¢þ
>W141168684
AXVD01000001
Actinomycetota
Nocardia sp. CNY236 [AXVD]
343237
343326
+
Ser
GCT
[ENA]
¡û
>W141231404
BATZ01000061
Actinomycetota
Nocardia otitidiscaviarum IFM 11049 [BATZ]
172133
172222
+
Ser
GCT
[ENA]
¡û
>W141231415
BAUA01000046
Actinomycetota
Nocardia brasiliensis IFM 10847 [BAUA]
111084
111173
+
Ser
GCT
[ENA]
¡û
>W141278606
JAFQ01000004
Actinomycetota
Nocardia sp. BMG51109 [JAFQ]
2014882
2014793
-
Ser
GCT
[ENA]
¡û
>C181057475
CP022088
Actinomycetota
Nocardia brasiliensis FDAARGOS_352 [CP022088]
6309831
6309920
+
Ser
GCT
-
¡û
>C181090258
CP023778
Actinomycetota
Nocardia terpenica NC_YFY_NT001 [CP023778]
232715
232804
+
Ser
GCT
-
¡û
>C181139105
CP026746
Actinomycetota
Nocardia cyriacigeorgica MDA3349 [CP026746]
1473076
1472987
-
Ser
GCT
-
¡û
>C181200289
CP031418
Actinomycetota
Nocardia farcinica W6977 [CP031418]
3481841
3481930
+
Ser
GCT
-
¡û
>C191065463
CP029710
Actinomycetota
Nocardia sp. CS682 [CP029710]
4871798
4871887
+
Ser
GCT
-
¡û
>C191208355
LR134352
Actinomycetota
Nocardia asteroides NCTC11293 [LR134352]
1004184
1004273
+
Ser
GCT
-
¡û
>C191219078
LR215973
Actinomycetota
Nocardia cyriacigeorgica 3012STDY6756504 [LR215973]
4966342
4966431
+
Ser
GCT
-
¡û
>W141759280
JNZF01000004
Actinomycetota
Nocardia carnea carneus [JNZF]
231284
231195
-
Ser
GCT
[ENA]
¡û
>W141760931
JOAJ01000009
Actinomycetota
Nocardia rhamnosiphila [JOAJ]
211884
211973
+
Ser
GCT
[ENA]
¡û
>W141767051
JOEJ01000009
Actinomycetota
Nocardia rhamnosiphila [JOEJ]
211589
211678
+
Ser
GCT
[ENA]
¡û
>W141769066
JOFP01000002
Actinomycetota
Pilimelia anulata [JOFP]
1892035
1892124
+
Ser
GCT
[ENA]
¡û
>W141774694
JOJF01000017
Actinomycetota
Nocardia sp. NRRL WC-3656 [JOJF]
202988
203077
+
Ser
GCT
[ENA]
¡û
>W1910433911
FVWC01000671
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 537 [FVWC]
169
80
-
Ser
GCT
[ENA]
¡û
>W1910897048
NGAF01000002
Actinomycetota
Nocardia cerradoensis CNM20130759 [NGAF]
690909
690998
+
Ser
GCT
[ENA]
¡û
>W1911422455
NXEG01000047
Actinomycetota
Nocardia farcinica CNM20091955 [NXEG]
1071
982
-
Ser
GCT
[ENA]
¡û
>W1911422507
NXEH01000038
Actinomycetota
Nocardia farcinica CNM20080921 [NXEH]
40988
40899
-
Ser
GCT
[ENA]
¡û
>W1911493034
OBEG01000004
Actinomycetota
Nocardia amikacinitolerans DSM 45537 [OBEG]
109497
109408
-
Ser
GCT
[ENA]
¡û
>W1911532650
OIFR01000003
Actinomycetota
Nocardia suismassiliense S-137 [OIFR]
412412
412501
+
Ser
GCT
[ENA]
¡û
>W1911573033
PDDW01000001
Actinomycetota
Nocardia sp. FDAARGOS_372 [PDDW]
4931256
4931167
-
Ser
GCT
[ENA]
¡û
>W1911814616
QZFU01000005
Actinomycetota
Nocardia panacis YIM PH 21724 [QZFU]
32362
32273
-
Ser
GCT
[ENA]
¡û
>W1810173179
PJMW01000002
Actinomycetota
Nocardia fluminea DSM 44489 [PJMW]
1470992
1470903
-
Ser
GCT
[ENA]
¡û
>W1810282363
PSYZ01000011
Actinomycetota
Nocardia nova ATCC 10905 [PSYZ]
79879
79968
+
Ser
GCT
[ENA]
¡û
>W1810282432
PSZA01000027
Actinomycetota
Nocardia nova MDA5529 [PSZA]
85549
85638
+
Ser
GCT
[ENA]
¡û
>W1810282477
PSZB01000028
Actinomycetota
Nocardia nova MDA3397 [PSZB]
1566
1477
-
Ser
GCT
[ENA]
¡û
>W1810282489
PSZC01000001
Actinomycetota
Nocardia nova MDA3139 [PSZC]
25414
25503
+
Ser
GCT
[ENA]
¡û
>W1810282543
PSZD01000001
Actinomycetota
Nocardia nova BAA2227 [PSZD]
519088
519177
+
Ser
GCT
[ENA]
¡û
>W1810282605
PSZE01000009
Actinomycetota
Nocardia nova MDA0897 [PSZE]
25414
25503
+
Ser
GCT
[ENA]
¡û
>W1810282671
PSZF01000018
Actinomycetota
Nocardia cyriacigeorgica MDA3732 [PSZF]
103335
103246
-
Ser
GCT
[ENA]
¡û
>W1810402895
PYHS01000001
Actinomycetota
Nocardia nova ATCC 33727 [PYHS]
102745
102834
+
Ser
GCT
[ENA]
¡û
>W1810402982
PYHT01000023
Actinomycetota
Nocardia sp. MDA0666 [PYHT]
495
406
-
Ser
GCT
[ENA]
¡û
>W1810532496
QCYJ01000005
Actinomycetota
Nocardia aurea SYSU K10002 [QCYJ]
147557
147468
-
Ser
GCT
[ENA]
¡û
>W1810608606
QGTL01000004
Actinomycetota
Nocardia neocaledoniensis DSM 44717 [QGTL]
666768
666857
+
Ser
GCT
[ENA]
¡û
>W1810659641
QJKF01000006
Actinomycetota
Nocardia tenerifensis DSM 44704 [QJKF]
216570
216659
+
Ser
GCT
[ENA]
¡û
>W1810720320
QNRE01000034
Actinomycetota
Nocardia puris DSM 44599 [QNRE]
260
171
-
Ser
GCT
[ENA]
¡û
>W1810763317
QQAZ01000008
Actinomycetota
Nocardia mexicana DSM 44952 [QQAZ]
401234
401323
+
Ser
GCT
[ENA]
¡û
>W1810763461
QQBC01000005
Actinomycetota
Nocardia pseudobrasiliensis DSM 44290 [QQBC]
8900
8989
+
Ser
GCT
[ENA]
¡û
>C151013366
CP006850
Actinomycetota
Nocardia nova SH22a [CP006850]
219603
219514
-
Ser
GCT
[Ensembl]
¡û
>W1511221611
JNFP01000077
Actinomycetota
Nocardia vulneris W9851 [JNFP]
5484
5395
-
Ser
GCT
[ENA]
¡û
>C121016041
FO082843
Actinomycetota
Nocardia cyriacigeorgica GUH-2 [FO082843]
217556
217645
+
Ser
GCT
[Ensembl]
¡û
>W121055522
AIHV01000006
Actinomycetota
Nocardia brasiliensis ATCC 700358 [AIHV]
289967
290056
+
Ser
GCT
[ENA]
¡û
>W121124816
BAFO01000001
Actinomycetota
Nocardia asteroides NBRC 15531 [BAFO]
200601
200690
+
Ser
GCT
[ENA]
¡û
>W121124868
BAFP01000005
Actinomycetota
Nocardia abscessus NBRC 100374 [BAFP]
28060
28149
+
Ser
GCT
[ENA]
¡û
>W121124916
BAFQ01000007
Actinomycetota
Nocardia aobensis NBRC 100429 [BAFQ]
3017
3106
+
Ser
GCT
[ENA]
¡û
>W121124963
BAFR01000003
Actinomycetota
Nocardia araoensis NBRC 100135 [BAFR]
87815
87904
+
Ser
GCT
[ENA]
¡û
>W121125013
BAFS01000007
Actinomycetota
Nocardia asiatica NBRC 100129 [BAFS]
89125
89214
+
Ser
GCT
[ENA]
¡û
>W121125065
BAFT01000003
Actinomycetota
Nocardia brasiliensis NBRC 14402 [BAFT]
81077
80988
-
Ser
GCT
[ENA]
¡û
>W121125109
BAFU01000003
Actinomycetota
Nocardia brevicatena NBRC 12119 [BAFU]
13514
13603
+
Ser
GCT
[ENA]
¡û
>W121125162
BAFV01000003
Actinomycetota
Nocardia carnea NBRC 14403 [BAFV]
75145
75056
-
Ser
GCT
[ENA]
¡û
>W121125204
BAFW01000002
Actinomycetota
Nocardia cerradoensis NBRC 101014 [BAFW]
111301
111390
+
Ser
GCT
[ENA]
¡û
>W121125256
BAFX01000004
Actinomycetota
Nocardia concava NBRC 100430 [BAFX]
1037
1126
+
Ser
GCT
[ENA]
¡û
>W121125332
BAFY01000071
Actinomycetota
Nocardia cyriacigeorgica NBRC 100375 [BAFY]
24119
24030
-
Ser
GCT
[ENA]
¡û
>W121125366
BAFZ01000003
Actinomycetota
Nocardia exalbida NBRC 100660 [BAFZ]
2002
2091
+
Ser
GCT
[ENA]
¡û
>W121125418
BAGA01000004
Actinomycetota
Nocardia higoensis NBRC 100133 [BAGA]
111002
110913
-
Ser
GCT
[ENA]
¡û
>W121125465
BAGB01000003
Actinomycetota
Nocardia jiangxiensis NBRC 101359 [BAGB]
64379
64468
+
Ser
GCT
[ENA]
¡û
>W121125512
BAGC01000002
Actinomycetota
Nocardia niigatensis NBRC 100131 [BAGC]
63810
63899
+
Ser
GCT
[ENA]
¡û
>W121125574
BAGD01000021
Actinomycetota
Nocardia otitidiscaviarum NBRC 14405 [BAGD]
21396
21307
-
Ser
GCT
[ENA]
¡û
>W121125641
BAGE01000001
Actinomycetota
Nocardia paucivorans NBRC 100373 [BAGE]
209306
209395
+
Ser
GCT
[ENA]
¡û
>W121125686
BAGF01000002
Actinomycetota
Nocardia pneumoniae NBRC 100136 [BAGF]
170552
170641
+
Ser
GCT
[ENA]
¡û
>W121125736
BAGG01000002
Actinomycetota
Nocardia takedensis NBRC 100417 [BAGG]
157900
157989
+
Ser
GCT
[ENA]
¡û
>W121125784
BAGH01000010
Actinomycetota
Nocardia tenerifensis NBRC 101015 [BAGH]
6555
6644
+
Ser
GCT
[ENA]
¡û
>W121125836
BAGI01000107
Actinomycetota
Nocardia terpenica NBRC 100888 [BAGI]
532
443
-
Ser
GCT
[ENA]
¡û
>W121125894
BAGJ01000006
Actinomycetota
Nocardia testacea NBRC 100365 [BAGJ]
45865
45776
-
Ser
GCT
[ENA]
¡û
>W121125940
BAGK01000013
Actinomycetota
Nocardia thailandica NBRC 100428 [BAGK]
1943
2032
+
Ser
GCT
[ENA]
¡û
>W121125998
BAGL01000003
Actinomycetota
Nocardia transvalensis NBRC 15921 [BAGL]
27629
27718
+
Ser
GCT
[ENA]
¡û
>W121126048
BAGM01000005
Actinomycetota
Nocardia veterana NBRC 100344 [BAGM]
1991
1902
-
Ser
GCT
[ENA]
¡û
>W121126098
BAGN01000007
Actinomycetota
Nocardia vinacea NBRC 16497 [BAGN]
8217
8128
-
Ser
GCT
[ENA]
¡û
>W1610057419
BBXO01000003
Actinomycetota
Nocardia pseudobrasiliensis [BBXO]
271658
271747
+
Ser
GCT
[ENA]
¡û
>W1610069084
BCRV01000001
Actinomycetota
Skermania piniformis NBRC 15059 [BCRV]
561557
561468
-
Ser
GCT
[ENA]
¡û
>W1610078311
BDAU01000035
Actinomycetota
Nocardia amikacinitolerans NBRC 108937 [BDAU]
17670
17759
+
Ser
GCT
[ENA]
¡û
>W1610078365
BDAV01000012
Actinomycetota
Nocardia africana NBRC 100379 [BDAV]
197046
196957
-
Ser
GCT
[ENA]
¡û
>W1610078419
BDAW01000038
Actinomycetota
Nocardia acidivorans NBRC 108247 [BDAW]
74465
74554
+
Ser
GCT
[ENA]
¡û
>W1610078478
BDAX01000023
Actinomycetota
Nocardia alba NBRC 108234 [BDAX]
193971
194060
+
Ser
GCT
[ENA]
¡û
>W1610078505
BDAY01000019
Actinomycetota
Nocardia altamirensis NBRC 108246 [BDAY]
139373
139462
+
Ser
GCT
[ENA]
¡û
>W1610078545
BDAZ01000001
Actinomycetota
Nocardia anaemiae NBRC 100462 [BDAZ]
279723
279812
+
Ser
GCT
[ENA]
¡û
>W1610078630
BDBA01000175
Actinomycetota
Nocardia amamiensis NBRC 102102 [BDBA]
3508
3419
-
Ser
GCT
[ENA]
¡û
>W1610078650
BDBB01000001
Actinomycetota
Nocardia arthritidis NBRC 100137 [BDBB]
41764
41675
-
Ser
GCT
[ENA]
¡û
>W1610078714
BDBC01000015
Actinomycetota
Nocardia beijingensis NBRC 16342 [BDBC]
45715
45626
-
Ser
GCT
[ENA]
¡û
>W1610078761
BDBD01000013
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
73210
73299
+
Ser
GCT
[ENA]
¡û
>W1610078802
BDBE01000006
Actinomycetota
Nocardia caishijiensis NBRC 108228 [BDBE]
82392
82303
-
Ser
GCT
[ENA]
¡û
>W1610078852
BDBF01000004
Actinomycetota
Nocardia elegans NBRC 108235 [BDBF]
62799
62888
+
Ser
GCT
[ENA]
¡û
>W1610078921
BDBG01000014
Actinomycetota
Nocardia salmonicida NBRC 100378 [BDBG]
314822
314733
-
Ser
GCT
[ENA]
¡û
>W1610078957
BDBH01000002
Actinomycetota
Nocardia harenae NBRC 108248 [BDBH]
257774
257863
+
Ser
GCT
[ENA]
¡û
>W1610079034
BDBI01000030
Actinomycetota
Nocardia ignorata NBRC 108230 [BDBI]
110921
110832
-
Ser
GCT
[ENA]
¡û
>W1610079052
BDBJ01000003
Actinomycetota
Nocardia farcinica NBRC 15532 [BDBJ]
107700
107789
+
Ser
GCT
[ENA]
¡û
>W1610079149
BDBK01000014
Actinomycetota
Nocardia inohanensis NBRC 100128 [BDBK]
105571
105482
-
Ser
GCT
[ENA]
¡û
>W1610079173
BDBL01000002
Actinomycetota
Nocardia kruczakiae NBRC 101016 [BDBL]
342870
342781
-
Ser
GCT
[ENA]
¡û
>W1610079241
BDBM01000020
Actinomycetota
Nocardia gamkensis NBRC 108242 [BDBM]
138243
138154
-
Ser
GCT
[ENA]
¡û
>W1610079272
BDBN01000008
Actinomycetota
Nocardia nova NBRC 15556 [BDBN]
23793
23882
+
Ser
GCT
[ENA]
¡û
>W1610079349
BDBO01000114
Actinomycetota
Nocardia jinanensis NBRC 108249 [BDBO]
18634
18545
-
Ser
GCT
[ENA]
¡û
>W1610079410
BDBP01000093
Actinomycetota
Nocardia lijiangensis NBRC 108240 [BDBP]
25912
26001
+
Ser
GCT
[ENA]
¡û
>W1610079418
BDBQ01000005
Actinomycetota
Nocardia miyunensis NBRC 108239 [BDBQ]
61938
62027
+
Ser
GCT
[ENA]
¡û
>W1610079502
BDBR01000036
Actinomycetota
Nocardia salmonicida NBRC 13393 [BDBR]
85046
85135
+
Ser
GCT
[ENA]
¡û
>W1610079540
BDBS01000024
Actinomycetota
Nocardia pseudobrasiliensis NBRC 108224 [BDBS]
8804
8893
+
Ser
GCT
[ENA]
¡û
>W1610079574
BDBT01000008
Actinomycetota
Nocardia shimofusensis NBRC 100134 [BDBT]
58008
58097
+
Ser
GCT
[ENA]
¡û
>W1610079646
BDBU01000024
Actinomycetota
Nocardia jejuensis NBRC 103114 [BDBU]
66982
66893
-
Ser
GCT
[ENA]
¡û
>W1610079699
BDBV01000054
Actinomycetota
Nocardia mexicana NBRC 108244 [BDBV]
17504
17593
+
Ser
GCT
[ENA]
¡û
>W1610079754
BDBW01000033
Actinomycetota
Nocardia puris NBRC 108233 [BDBW]
202423
202334
-
Ser
GCT
[ENA]
¡û
>W1610079790
BDBX01000014
Actinomycetota
Nocardia sienata NBRC 100364 [BDBX]
39903
39992
+
Ser
GCT
[ENA]
¡û
>W1610079837
BDBY01000078
Actinomycetota
Nocardia pseudovaccinii NBRC 100343 [BDBY]
32559
32648
+
Ser
GCT
[ENA]
¡û
>W1610079925
BDBZ01000030
Actinomycetota
Nocardia speluncae NBRC 108251 [BDBZ]
120228
120139
-
Ser
GCT
[ENA]
¡û
>W1610079951
BDCA01000003
Actinomycetota
Nocardia vermiculata NBRC 100427 [BDCA]
157388
157477
+
Ser
GCT
[ENA]
¡û
>W1610080007
BDCB01000020
Actinomycetota
Nocardia salmonicida NBRC 100376 [BDCB]
30108
30019
-
Ser
GCT
[ENA]
¡û
>W1610080043
BDCC01000007
Actinomycetota
Nocardia vaccinii NBRC 15922 [BDCC]
52104
52193
+
Ser
GCT
[ENA]
¡û
>W1610080122
BDCD01000021
Actinomycetota
Nocardia yamanashiensis NBRC 100130 [BDCD]
261575
261664
+
Ser
GCT
[ENA]
¡û
>W1610080162
BDCE01000008
Actinomycetota
Nocardia uniformis NBRC 13702 [BDCE]
49077
48988
-
Ser
GCT
[ENA]
¡û
>W1610080243
BDCF01000014
Actinomycetota
Nocardia xishanensis NBRC 101358 [BDCF]
69826
69737
-
Ser
GCT
[ENA]
¡û
>W1610080282
BDCG01000004
Actinomycetota
Nocardia flavorosea NBRC 108225 [BDCG]
209536
209447
-
Ser
GCT
[ENA]
¡û
>W1610080334
BDCH01000006
Actinomycetota
Nocardia crassostreae [BDCH]
6858
6769
-
Ser
GCT
[ENA]
¡û
>W1610080399
BDCI01000008
Actinomycetota
Nocardia vulneris [BDCI]
179861
179772
-
Ser
GCT
[ENA]
¡û
>W1610080444
BDCJ01000005
Actinomycetota
Nocardia grenadensis NBRC 108939 [BDCJ]
157
68
-
Ser
GCT
[ENA]
¡û
>W1610080497
BDCK01000016
Actinomycetota
Nocardia niwae NBRC 108934 = DSM 45340 [BDCK]
160485
160396
-
Ser
GCT
[ENA]
¡û
>W1610080553
BDCL01000027
Actinomycetota
Nocardia rhamnosiphila NBRC 108938 [BDCL]
63009
62920
-
Ser
GCT
[ENA]
¡û
>W1610080588
BDCM01000003
Actinomycetota
Nocardia mikamii NBRC 108933 [BDCM]
707023
706934
-
Ser
GCT
[ENA]
¡û
>W1610080638
BDCN01000005
Actinomycetota
Nocardia violaceofusca NBRC 14427 [BDCN]
92747
92658
-
Ser
GCT
[ENA]
¡û
>W1610080858
BDCT01000026
Actinomycetota
Nocardia arizonensis [BDCT]
845
756
-
Ser
GCT
[ENA]
¡û
>W1610080878
BDCU01000008
Actinomycetota
Nocardia fusca NBRC 14340 [BDCU]
114970
115059
+
Ser
GCT
[ENA]
¡û
>C131008878
CP003876
Actinomycetota
Nocardia brasiliensis ATCC 700358 HUJEG-1 [CP003876]
228916
228827
-
Ser
GCT
[Ensembl]
¡û
>W1610617925
LGYZ01000053
Actinomycetota
Nocardia arizonensis [LGYZ]
895
806
-
Ser
GCT
[ENA]
¡û
>W1610725877
LMFE01000011
Actinomycetota
Nocardia sp. Root136 [LMFE]
141369
141280
-
Ser
GCT
[ENA]
¡û
>W1610752143
LNDA01000063
Actinomycetota
Nocardia jinanensis NBRC 108249 [LNDA]
23316
23405
+
Ser
GCT
[ENA]
¡û
>W1610891004
LRRB01000228
Actinomycetota
Aldersonia kunmingensis [LRRB]
9530
9619
+
Ser
GCT
[ENA]
¡û
>W1610891508
LRRM01000002
Actinomycetota
Nocardia brasiliensis [LRRM]
241119
241030
-
Ser
GCT
[ENA]
¡û
>W1610986489
LWGR01000021
Actinomycetota
Nocardia terpenica [LWGR]
469357
469446
+
Ser
GCT
[ENA]
¡û
>W1611035862
LZIG01000088
Actinomycetota
Mycobacterium sp. 852002-51759_SCH5129042 [LZIG]
1574
1485
-
Ser
GCT
[ENA]
¡û
>W1611039728
LZLJ01000062
Actinomycetota
Mycobacterium sp. 1274756.6 [LZLJ]
219030
218941
-
Ser
GCT
[ENA]
¡û
>W1611041020
LZMK01000334
Actinomycetota
Nocardia sp. 852002-20019_SCH5090214 [LZMK]
23265
23354
+
Ser
GCT
[ENA]
¡û
>W1611041032
LZML01000011
Actinomycetota
Nocardia sp. 852002-51101_SCH5132738 [LZML]
1561
1472
-
Ser
GCT
[ENA]
¡û
>W1611043419
LZSP01000172
Actinomycetota
Nocardia sp. 852002-51244_SCH5132740 [LZSP]
22860
22949
+
Ser
GCT
[ENA]
¡û
>W1710054118
BBXO01000003
Actinomycetota
Nocardia pseudobrasiliensis [BBXO]
271658
271747
+
Ser
GCT
[ENA]
¡û
>W1710066457
BCRV01000001
Actinomycetota
Skermania piniformis NBRC 15059 [BCRV]
561557
561468
-
Ser
GCT
[ENA]
¡û
>W1710076870
BDAU01000035
Actinomycetota
Nocardia amikacinitolerans NBRC 108937 [BDAU]
17670
17759
+
Ser
GCT
[ENA]
¡û
>W1710076924
BDAV01000012
Actinomycetota
Nocardia africana NBRC 100379 [BDAV]
197046
196957
-
Ser
GCT
[ENA]
¡û
>W1710076978
BDAW01000038
Actinomycetota
Nocardia acidivorans NBRC 108247 [BDAW]
74465
74554
+
Ser
GCT
[ENA]
¡û
>W1710077037
BDAX01000023
Actinomycetota
Nocardia alba NBRC 108234 [BDAX]
193971
194060
+
Ser
GCT
[ENA]
¡û
>W1710077064
BDAY01000019
Actinomycetota
Nocardia altamirensis NBRC 108246 [BDAY]
139373
139462
+
Ser
GCT
[ENA]
¡û
>W1710077104
BDAZ01000001
Actinomycetota
Nocardia anaemiae NBRC 100462 [BDAZ]
279723
279812
+
Ser
GCT
[ENA]
¡û
>W1710077189
BDBA01000175
Actinomycetota
Nocardia amamiensis NBRC 102102 [BDBA]
3508
3419
-
Ser
GCT
[ENA]
¡û
>W1710077209
BDBB01000001
Actinomycetota
Nocardia arthritidis NBRC 100137 [BDBB]
41764
41675
-
Ser
GCT
[ENA]
¡û
>W1710077273
BDBC01000015
Actinomycetota
Nocardia beijingensis NBRC 16342 [BDBC]
45715
45626
-
Ser
GCT
[ENA]
¡û
>W1710077320
BDBD01000013
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
73210
73299
+
Ser
GCT
[ENA]
¡û
>W1710077361
BDBE01000006
Actinomycetota
Nocardia caishijiensis NBRC 108228 [BDBE]
82392
82303
-
Ser
GCT
[ENA]
¡û
>W1710077411
BDBF01000004
Actinomycetota
Nocardia elegans NBRC 108235 [BDBF]
62799
62888
+
Ser
GCT
[ENA]
¡û
>W1710077480
BDBG01000014
Actinomycetota
Nocardia salmonicida NBRC 100378 [BDBG]
314822
314733
-
Ser
GCT
[ENA]
¡û
>W1710077516
BDBH01000002
Actinomycetota
Nocardia harenae NBRC 108248 [BDBH]
257774
257863
+
Ser
GCT
[ENA]
¡û
>W1710077593
BDBI01000030
Actinomycetota
Nocardia ignorata NBRC 108230 [BDBI]
110921
110832
-
Ser
GCT
[ENA]
¡û
>W1710077611
BDBJ01000003
Actinomycetota
Nocardia farcinica NBRC 15532 [BDBJ]
107700
107789
+
Ser
GCT
[ENA]
¡û
>W1710077708
BDBK01000014
Actinomycetota
Nocardia inohanensis NBRC 100128 [BDBK]
105571
105482
-
Ser
GCT
[ENA]
¡û
>W1710077732
BDBL01000002
Actinomycetota
Nocardia kruczakiae NBRC 101016 [BDBL]
342870
342781
-
Ser
GCT
[ENA]
¡û
>W1710077800
BDBM01000020
Actinomycetota
Nocardia gamkensis NBRC 108242 [BDBM]
138243
138154
-
Ser
GCT
[ENA]
¡û
>W1710077831
BDBN01000008
Actinomycetota
Nocardia nova NBRC 15556 [BDBN]
23793
23882
+
Ser
GCT
[ENA]
¡û
>W1710077908
BDBO01000114
Actinomycetota
Nocardia jinanensis NBRC 108249 [BDBO]
18634
18545
-
Ser
GCT
[ENA]
¡û
>W1710077969
BDBP01000093
Actinomycetota
Nocardia lijiangensis NBRC 108240 [BDBP]
25912
26001
+
Ser
GCT
[ENA]
¡û
>W1710077977
BDBQ01000005
Actinomycetota
Nocardia miyunensis NBRC 108239 [BDBQ]
61938
62027
+
Ser
GCT
[ENA]
¡û
>W1710078061
BDBR01000036
Actinomycetota
Nocardia salmonicida NBRC 13393 [BDBR]
85046
85135
+
Ser
GCT
[ENA]
¡û
>W1710078099
BDBS01000024
Actinomycetota
Nocardia pseudobrasiliensis NBRC 108224 [BDBS]
8804
8893
+
Ser
GCT
[ENA]
¡û
>W1710078133
BDBT01000008
Actinomycetota
Nocardia shimofusensis NBRC 100134 [BDBT]
58008
58097
+
Ser
GCT
[ENA]
¡û
>W1710078205
BDBU01000024
Actinomycetota
Nocardia jejuensis NBRC 103114 [BDBU]
66982
66893
-
Ser
GCT
[ENA]
¡û
>W1710078258
BDBV01000054
Actinomycetota
Nocardia mexicana NBRC 108244 [BDBV]
17504
17593
+
Ser
GCT
[ENA]
¡û
>W1710078313
BDBW01000033
Actinomycetota
Nocardia puris NBRC 108233 [BDBW]
202423
202334
-
Ser
GCT
[ENA]
¡û
>W1710078349
BDBX01000014
Actinomycetota
Nocardia sienata NBRC 100364 [BDBX]
39903
39992
+
Ser
GCT
[ENA]
¡û
>W1710078396
BDBY01000078
Actinomycetota
Nocardia pseudovaccinii NBRC 100343 [BDBY]
32559
32648
+
Ser
GCT
[ENA]
¡û
>W1710078484
BDBZ01000030
Actinomycetota
Nocardia speluncae NBRC 108251 [BDBZ]
120228
120139
-
Ser
GCT
[ENA]
¡û
>W1710078510
BDCA01000003
Actinomycetota
Nocardia vermiculata NBRC 100427 [BDCA]
157388
157477
+
Ser
GCT
[ENA]
¡û
>W1710078566
BDCB01000020
Actinomycetota
Nocardia salmonicida NBRC 100376 [BDCB]
30108
30019
-
Ser
GCT
[ENA]
¡û
>W1710078602
BDCC01000007
Actinomycetota
Nocardia vaccinii NBRC 15922 [BDCC]
52104
52193
+
Ser
GCT
[ENA]
¡û
>W1710078681
BDCD01000021
Actinomycetota
Nocardia yamanashiensis NBRC 100130 [BDCD]
261575
261664
+
Ser
GCT
[ENA]
¡û
>W1710078721
BDCE01000008
Actinomycetota
Nocardia uniformis NBRC 13702 [BDCE]
49077
48988
-
Ser
GCT
[ENA]
¡û
>W1710078802
BDCF01000014
Actinomycetota
Nocardia xishanensis NBRC 101358 [BDCF]
69826
69737
-
Ser
GCT
[ENA]
¡û
>W1710078841
BDCG01000004
Actinomycetota
Nocardia flavorosea NBRC 108225 [BDCG]
209536
209447
-
Ser
GCT
[ENA]
¡û
>W1710078893
BDCH01000006
Actinomycetota
Nocardia crassostreae [BDCH]
6858
6769
-
Ser
GCT
[ENA]
¡û
>W1710078958
BDCI01000008
Actinomycetota
Nocardia vulneris [BDCI]
179861
179772
-
Ser
GCT
[ENA]
¡û
>W1710079003
BDCJ01000005
Actinomycetota
Nocardia grenadensis NBRC 108939 [BDCJ]
157
68
-
Ser
GCT
[ENA]
¡û
>W1710079056
BDCK01000016
Actinomycetota
Nocardia niwae NBRC 108934 = DSM 45340 [BDCK]
160485
160396
-
Ser
GCT
[ENA]
¡û
>W1710079112
BDCL01000027
Actinomycetota
Nocardia rhamnosiphila NBRC 108938 [BDCL]
63009
62920
-
Ser
GCT
[ENA]
¡û
>W1710079147
BDCM01000003
Actinomycetota
Nocardia mikamii NBRC 108933 [BDCM]
707023
706934
-
Ser
GCT
[ENA]
¡û
>W1710079197
BDCN01000005
Actinomycetota
Nocardia violaceofusca NBRC 14427 [BDCN]
92747
92658
-
Ser
GCT
[ENA]
¡û
>W1710079417
BDCT01000026
Actinomycetota
Nocardia arizonensis [BDCT]
845
756
-
Ser
GCT
[ENA]
¡û
>W1710079437
BDCU01000008
Actinomycetota
Nocardia fusca NBRC 14340 [BDCU]
114970
115059
+
Ser
GCT
[ENA]
¡û
>W1710568857
FOTX01000001
Actinomycetota
Nocardia asteroides [FOTX]
127480
127391
-
Ser
GCT
[ENA]
¡û
>W1710599650
FTOW01000003
Actinomycetota
Nocardia farcinica [FTOW]
113331
113420
+
Ser
GCT
[ENA]
¡û
>W1710744100
LGYZ01000053
Actinomycetota
Nocardia arizonensis [LGYZ]
895
806
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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