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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.46072 (5 seq.)
>C171131728
LT854705
Bacillota
Levilactobacillus zymae ACA-DC 3411 [LT854705]
1646205
1646116
-
Ser
GCT
-
¡û
>W1610034560
AZDV01000026
Bacillota
Levilactobacillus acidifarinae DSM 19394 [AZDV]
1332
1421
+
Ser
GCT
[ENA]
¡û
>W1610034637
AZDW01000055
Bacillota
Levilactobacillus zymae DSM 19395 [AZDW]
1329
1418
+
Ser
GCT
[ENA]
¡û
>W1710031687
AZDV01000026
Bacillota
Levilactobacillus acidifarinae DSM 19394 [AZDV]
1332
1421
+
Ser
GCT
[ENA]
¡û
>W1710031764
AZDW01000055
Bacillota
Levilactobacillus zymae DSM 19395 [AZDW]
1329
1418
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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