This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.46609 (64 seq.)
>W1711095190
LTGO01000087
Actinomycetota
Corynebacterium sp. HMSC067D03 [LTGO]
77832
77745
-
Ser
CGA
[ENA]
¡û
>W1711096582
LTHX01000007
Actinomycetota
Corynebacterium sp. HMSC055D05 [LTHX]
13765
13678
-
Ser
CGA
[ENA]
¡û
>W1711102638
LTNW01000064
Actinomycetota
Corynebacterium sp. HMSC034A01 [LTNW]
7843
7930
+
Ser
CGA
[ENA]
¡û
>W1711103621
LTOW01000021
Actinomycetota
Corynebacterium sp. HMSC070H05 [LTOW]
2464
2551
+
Ser
CGA
[ENA]
¡û
>W1711105950
LTRH01000075
Actinomycetota
Corynebacterium sp. HMSC036E10 [LTRH]
83118
83031
-
Ser
CGA
[ENA]
¡û
>W1711106573
LTRY01000068
Actinomycetota
Corynebacterium sp. HMSC034E11 [LTRY]
19278
19191
-
Ser
CGA
[ENA]
¡û
>W1711107206
LTSO01000040
Actinomycetota
Corynebacterium sp. HMSC075D04 [LTSO]
2485
2572
+
Ser
CGA
[ENA]
¡û
>W1711108826
LTUC01000044
Actinomycetota
Corynebacterium sp. HMSC071B10 [LTUC]
511
424
-
Ser
CGA
[ENA]
¡û
>W1711114732
LTZO01000023
Actinomycetota
Corynebacterium sp. HMSC11D10 [LTZO]
2383
2470
+
Ser
CGA
[ENA]
¡û
>W1711185865
LWNT01000034
Actinomycetota
Corynebacterium sp. HMSC08F01 [LWNT]
19333
19246
-
Ser
CGA
[ENA]
¡û
>W1711185903
LWNU01000007
Actinomycetota
Corynebacterium sp. HMSC08D02 [LWNU]
18013
18100
+
Ser
CGA
[ENA]
¡û
>W1711186516
LWOH01000019
Actinomycetota
Corynebacterium sp. HMSC05H05 [LWOH]
8970
8883
-
Ser
CGA
[ENA]
¡û
>W1711186757
LWOM01000021
Actinomycetota
Corynebacterium sp. HMSC05C01 [LWOM]
16905
16818
-
Ser
CGA
[ENA]
¡û
>W1711186919
LWOP01000041
Actinomycetota
Corynebacterium sp. HMSC30G07 [LWOP]
12173
12086
-
Ser
CGA
[ENA]
¡û
>W1711187002
LWOR01000109
Actinomycetota
Corynebacterium sp. HMSC29G08 [LWOR]
9265
9178
-
Ser
CGA
[ENA]
¡û
>W1711208427
LXGG01000022
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
123597
123684
+
Ser
CGA
[ENA]
¡û
>W1711482571
MKAX01000941
Actinomycetota
Corynebacterium sp. BCW_4722 concisus [MKAX]
10168
10255
+
Ser
CGA
[ENA]
¡û
>W1711510272
MLAL01000031
Actinomycetota
Corynebacterium sp. NML130628 [MLAL]
4330
4243
-
Ser
CGA
[ENA]
¡û
>W1711511682
MLCQ01000010
Actinomycetota
Corynebacterium sp. NML140438 [MLCQ]
288
201
-
Ser
CGA
[ENA]
¡û
>W1711511764
MLCR01000021
Actinomycetota
Corynebacterium sp. NML120713 [MLCR]
290
203
-
Ser
CGA
[ENA]
¡û
>W1711517361
MLJM01000008
Actinomycetota
Corynebacterium sp. HMSC074A01 [MLJM]
185893
185980
+
Ser
CGA
[ENA]
¡û
>C171064733
CP017639
Actinomycetota
Corynebacterium sp. NML98-0116 [CP017639]
2188036
2187949
-
Ser
CGA
-
¡û
>W131251633
CAVS020000007
Actinomycetota
Corynebacterium ihumii GD7 [CAVS]
13575
13662
+
Ser
CGA
[ENA]
¡û
>WENV181212339
OFBO01002147
[OFBO] metagenome; hydrothermal vent
231
144
-
Ser
CGA
[ENA]
¢þ
>WENV181212411
OFBP01001484
[OFBP] metagenome; hydrothermal vent
708
795
+
Ser
CGA
[ENA]
¢þ
>WENV181212491
OFBQ01001509
[OFBQ] metagenome; hydrothermal vent
708
795
+
Ser
CGA
[ENA]
¢þ
>WENV182636051
OJKZ01000161
[OJKZ] metagenome; surface
13467
13554
+
Ser
CGA
[ENA]
¢þ
>WENV182636104
OJKZ01000313
[OJKZ] metagenome; surface
2415
2502
+
Ser
CGA
[ENA]
¢þ
>WENV182636169
OJKZ01000684
[OJKZ] metagenome; surface
9538
9625
+
Ser
CGA
[ENA]
¢þ
>WENV182641844
OJLK01003066
[OJLK] metagenome; surface
121
208
+
Ser
CGA
[ENA]
¢þ
>WENV182643021
OJLS01000116
[OJLS] metagenome; surface
17115
17028
-
Ser
CGA
[ENA]
¢þ
>WENV182643658
OJLW01000394
[OJLW] metagenome; surface
13517
13604
+
Ser
CGA
[ENA]
¢þ
>WENV182643685
OJLW01000486
[OJLW] metagenome; surface
17162
17075
-
Ser
CGA
[ENA]
¢þ
>WENV182644893
OJLY01000656
[OJLY] metagenome; surface
2377
2464
+
Ser
CGA
[ENA]
¢þ
>WENV182645799
OJLZ01003223
[OJLZ] metagenome; surface
1263
1176
-
Ser
CGA
[ENA]
¢þ
>WENV182671574
OJNM01000291
[OJNM] metagenome; surface
17155
17068
-
Ser
CGA
[ENA]
¢þ
>WENV182671852
OJNM01005045
[OJNM] metagenome; surface
456
543
+
Ser
CGA
[ENA]
¢þ
>WENV182821111
OKAS01001165
[OKAS] human gut metagenome; human gut
565
478
-
Ser
CGA
[ENA]
¢þ
>C181039014
CP019688
Actinomycetota
Corynebacterium glaucum DSM 30827 [CP019688]
114251
114338
+
Ser
CGA
-
¡û
>C181225905
LT906467
Actinomycetota
Corynebacterium imitans NCTC13015 [LT906467]
227511
227598
+
Ser
CGA
-
¡û
>W09127966
ACLJ01000058
Actinomycetota
Corynebacterium genitalium ATCC 33030 [ACLJ]
19290
19203
-
Ser
CGA
[ENA]
¡û
>W1910225831
FMSX01000010
Actinomycetota
Corynebacterium sp. MC3 [FMSX]
43412
43499
+
Ser
CGA
[ENA]
¡û
>W1910339908
FTLL01000016
Actinomycetota
Corynebacterium urinipleomorphum Marseille-P2799 [FTLL]
184636
184723
+
Ser
CGA
[ENA]
¡û
>W1910469835
FWYQ01000017
Actinomycetota
Corynebacterium fournieri Marseille-P2948 [FWYQ]
15652
15565
-
Ser
CGA
[ENA]
¡û
>W1911178999
NQMQ01000001
Actinomycetota
Corynebacterium hadale NBT06-6 [NQMQ]
197851
197764
-
Ser
CGA
[ENA]
¡û
>W1911243349
NSGK01000013
Actinomycetota
Corynebacterium sp. NML 150383 [NSGK]
12974
13061
+
Ser
CGA
[ENA]
¡û
>W1911243366
NSGL01000001
Actinomycetota
Corynebacterium sp. NML 120412 [NSGL]
898555
898642
+
Ser
CGA
[ENA]
¡û
>W1911243451
NSGM01000004
Actinomycetota
Corynebacterium hadale NML00-0156 [NSGM]
301014
301101
+
Ser
CGA
[ENA]
¡û
>W1911243512
NSGN01000010
Actinomycetota
Corynebacterium hadale NML99-0020 [NSGN]
100731
100818
+
Ser
CGA
[ENA]
¡û
>W1911243553
NSGO01000007
Actinomycetota
Corynebacterium hadale NML93-0607 [NSGO]
107387
107474
+
Ser
CGA
[ENA]
¡û
>W1911243576
NSGP01000001
Actinomycetota
Corynebacterium hadale NML92-0415 [NSGP]
212136
212223
+
Ser
CGA
[ENA]
¡û
>W1911551215
OVSI01000007
Actinomycetota
Corynebacterium senegalense Marseille-P4329 [OVSI]
15669
15582
-
Ser
CGA
[ENA]
¡û
>W1911596557
PNHG01000005
Actinomycetota
Corynebacterium tuscaniense UMB0792 [PNHG]
78620
78533
-
Ser
CGA
[ENA]
¡û
>W1810187337
PKHN01000001
Actinomycetota
Corynebacterium riegelii UMB0243 [PKHN]
69936
70023
+
Ser
CGA
[ENA]
¡û
>W1810187453
PKHP01000003
Actinomycetota
Corynebacterium coyleae UMB0989 [PKHP]
124763
124676
-
Ser
CGA
[ENA]
¡û
>W1810187511
PKHQ01000005
Actinomycetota
Corynebacterium coyleae UMB0147 [PKHQ]
57033
56946
-
Ser
CGA
[ENA]
¡û
>C151045488
CP009211
Actinomycetota
Corynebacterium imitans DSM 44264 [CP009211]
145538
145625
+
Ser
CGA
[Ensembl]
¡û
>C151045573
CP009215
Actinomycetota
Corynebacterium ureicelerivorans IMMIB RIV-2301 [CP009215]
97195
97282
+
Ser
CGA
[Ensembl]
¡û
>W1511351468
JRNG01000053
Actinomycetota
Corynebacterium tuscaniense DNF00037 [JRNG]
2612
2699
+
Ser
CGA
[ENA]
¡û
>C161041057
CP012342
Actinomycetota
Corynebacterium riegelii PUDD_83A45 [CP012342]
1919092
1919005
-
Ser
CGA
[Ensembl]
¡û
>W1610996189
LXGG01000022
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
123597
123684
+
Ser
CGA
[ENA]
¡û
>W1710534325
FNRU01000002
Actinomycetota
Corynebacterium coyleae [FNRU]
1172722
1172809
+
Ser
CGA
[ENA]
¡û
>W1710596011
FTMH01000027
Actinomycetota
Corynebacterium afermentans [FTMH]
10041
10128
+
Ser
CGA
[ENA]
¡û
>W1710598763
FTOF01000001
Actinomycetota
Corynebacterium appendicis CIP 107643 [FTOF]
183332
183245
-
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK