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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.469075 (191 seq.)
>W1710926755
LOEL01000026
Bacteroidota
Porphyromonas gingivalis [LOEL]
5276
5349
+
Gln
CTG
[ENA]
¡û
>W1711066956
LSDJ01000093
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
170
97
-
Gln
TTG
[ENA]
¡û
>W131111452
APMB01000240
Bacteroidota
Porphyromonas gingivalis JCVI SC001 [APMB]
4509
4582
+
Gln
CTG
[ENA]
¡û
>W131175786
ARJN01000033
Bacteroidota
Porphyromonas gulae DSM 15663 [ARJN]
13057
12984
-
Gln
CTG
[ENA]
¡û
>W1712084862
NHRU01000002
Bacteroidota
Porphyromonas gingivalis [NHRU]
32774
32701
-
Gln
CTG
[ENA]
¡û
>C016388
AE015924
Bacteroidota
Porphyromonas gingivalis W83 [AE015924]
1315476
1315403
-
Gln
CTG
[Ensembl]
¡û
>WENV180005550
FLRW01093487
[FLRW] metagenome; saliva
418
347
-
Gln
TTG
[ENA]
¡û
>WENV180006636
FLRY01166196
[FLRY] metagenome; saliva
824
753
-
Gln
TTG
[ENA]
¡û
>WENV180010166
FLSC01362812
[FLSC] metagenome; saliva
2981
3052
+
Gln
TTG
[ENA]
¡û
>WENV180010801
FLSD01172394
[FLSD] metagenome; saliva
3
74
+
Gln
CTG
[ENA]
¡û
>WENV180010993
FLSI01064942
[FLSI] metagenome; saliva
74
3
-
Gln
CTG
[ENA]
¡û
>WENV180698691
ODDH01079296
[ODDH] human metagenome; G_DNA_Buccal mucosa
142
213
+
Gln
TTG
[ENA]
¡û
>WENV180708000
ODFJ01000158
[ODFJ] human metagenome; G_DNA_Tongue dorsum
8872
8943
+
Gln
TTG
[ENA]
¡û
>WENV180727474
ODGU01006023
[ODGU] human metagenome; G_DNA_Supragingival plaque
2267
2196
-
Gln
TTG
[ENA]
¡û
>WENV180727895
ODGU01015206
[ODGU] human metagenome; G_DNA_Supragingival plaque
361
432
+
Gln
TTG
[ENA]
¡û
>WENV180729287
ODGU01320525
[ODGU] human metagenome; G_DNA_Supragingival plaque
190
119
-
Gln
TTG
[ENA]
¡û
>WENV180729291
ODGU01321683
[ODGU] human metagenome; G_DNA_Supragingival plaque
176
105
-
Gln
TTG
[ENA]
¡û
>WENV180750653
ODHS01005136
[ODHS] human metagenome; G_DNA_Supragingival plaque
1773
1844
+
Gln
TTG
[ENA]
¡û
>WENV180759313
ODHY01006607
[ODHY] human metagenome; G_DNA_Buccal mucosa
183
254
+
Gln
TTG
[ENA]
¡û
>WENV180780205
ODIN01069151
[ODIN] human metagenome; G_DNA_Throat
196
125
-
Gln
TTG
[ENA]
¡û
>WENV180781946
ODIP01009443
[ODIP] human metagenome; G_DNA_Supragingival plaque
1878
1807
-
Gln
TTG
[ENA]
¡û
>WENV180782651
ODIQ01000093
[ODIQ] human metagenome; G_DNA_Tongue dorsum
8955
9026
+
Gln
TTG
[ENA]
¡û
>WENV180789808
ODIT01000832
[ODIT] human metagenome; G_DNA_Tongue dorsum
4823
4752
-
Gln
TTG
[ENA]
¡û
>WENV180795327
ODIZ01113813
[ODIZ] human metagenome; G_DNA_Tongue dorsum
174
103
-
Gln
TTG
[ENA]
¡û
>WENV180795467
ODJB01000007
[ODJB] human metagenome; G_DNA_Supragingival plaque
221492
221421
-
Gln
TTG
[ENA]
¡û
>WENV180795603
ODJB01000070
[ODJB] human metagenome; G_DNA_Supragingival plaque
79589
79660
+
Gln
TTG
[ENA]
¡û
>WENV180804489
ODJG01003716
[ODJG] human metagenome; G_DNA_Supragingival plaque
5576
5647
+
Gln
TTG
[ENA]
¡û
>WENV180806826
ODJI01000056
[ODJI] human metagenome; G_DNA_Tongue dorsum
67671
67600
-
Gln
TTG
[ENA]
¡û
>WENV180808573
ODJK01000240
[ODJK] human metagenome; G_DNA_Subgingival plaque
9097
9026
-
Gln
TTG
[ENA]
¡û
>WENV180808830
ODJK01001306
[ODJK] human metagenome; G_DNA_Subgingival plaque
8562
8491
-
Gln
TTG
[ENA]
¡û
>WENV180810682
ODJM01000133
[ODJM] human metagenome; G_DNA_Buccal mucosa
19263
19192
-
Gln
TTG
[ENA]
¡û
>WENV180824340
ODJX01003767
[ODJX] human metagenome; G_DNA_Supragingival plaque
3093
3164
+
Gln
TTG
[ENA]
¡û
>WENV180830450
ODKB01003767
[ODKB] human metagenome; G_DNA_Tongue dorsum
3388
3459
+
Gln
TTG
[ENA]
¡û
>WENV180832054
ODKC01000399
[ODKC] human metagenome; G_DNA_Supragingival plaque
375
446
+
Gln
TTG
[ENA]
¡û
>WENV180832093
ODKC01000478
[ODKC] human metagenome; G_DNA_Supragingival plaque
8839
8910
+
Gln
TTG
[ENA]
¡û
>WENV180833526
ODKC01074962
[ODKC] human metagenome; G_DNA_Supragingival plaque
1
72
+
Gln
TTG
[ENA]
¡û
>WENV180842633
ODKM01093127
[ODKM] human metagenome; G_DNA_Buccal mucosa
110
181
+
Gln
TTG
[ENA]
¡û
>WENV180845180
ODKT01000001
[ODKT] human metagenome; G_DNA_Supragingival plaque
171999
171928
-
Gln
TTG
[ENA]
¡û
>WENV180846124
ODKT01005578
[ODKT] human metagenome; G_DNA_Supragingival plaque
177
106
-
Gln
TTG
[ENA]
¡û
>WENV180847984
ODKT01320209
[ODKT] human metagenome; G_DNA_Supragingival plaque
2
73
+
Gln
TTG
[ENA]
¡û
>WENV180848004
ODKT01347873
[ODKT] human metagenome; G_DNA_Supragingival plaque
2
73
+
Gln
TTG
[ENA]
¡û
>WENV180848042
ODKT01357936
[ODKT] human metagenome; G_DNA_Supragingival plaque
164
93
-
Gln
TTG
[ENA]
¡û
>WENV180854842
ODKX01012902
[ODKX] human metagenome; G_DNA_Tongue dorsum
2230
2301
+
Gln
TTG
[ENA]
¡û
>WENV180856037
ODKZ01001881
[ODKZ] human metagenome; G_DNA_Tongue dorsum
4767
4696
-
Gln
TTG
[ENA]
¡û
>WENV180858337
ODLC01003534
[ODLC] human metagenome; G_DNA_Tongue dorsum
1604
1533
-
Gln
TTG
[ENA]
¡û
>WENV180859198
ODLD01000074
[ODLD] human metagenome; G_DNA_Supragingival plaque
37377
37448
+
Gln
TTG
[ENA]
¡û
>WENV180861674
ODLE01008357
[ODLE] human metagenome; G_DNA_Tongue dorsum
220
149
-
Gln
TTG
[ENA]
¡û
>WENV180877911
ODLV01005500
[ODLV] human metagenome; G_DNA_Tongue dorsum
3331
3402
+
Gln
TTG
[ENA]
¡û
>WENV180881901
ODMB01000577
[ODMB] human metagenome; G_DNA_Buccal mucosa
3342
3413
+
Gln
TTG
[ENA]
¡û
>WENV180889767
ODMN01135074
[ODMN] human metagenome; G_DNA_Supragingival plaque
5
76
+
Gln
TTG
[ENA]
¡û
>WENV180924043
ODTK01000811
[ODTK] human metagenome; G_DNA_Supragingival plaque
16783
16854
+
Gln
TTG
[ENA]
¡û
>WENV180924269
ODTK01002416
[ODTK] human metagenome; G_DNA_Supragingival plaque
73
2
-
Gln
TTG
[ENA]
¡û
>WENV180924283
ODTK01002572
[ODTK] human metagenome; G_DNA_Supragingival plaque
8398
8469
+
Gln
TTG
[ENA]
¡û
>WENV180925262
ODTK01067025
[ODTK] human metagenome; G_DNA_Supragingival plaque
453
524
+
Gln
TTG
[ENA]
¡û
>WENV180938567
ODTX01003485
[ODTX] human metagenome; G_DNA_Supragingival plaque
1955
1884
-
Gln
TTG
[ENA]
¡û
>WENV180938777
ODTX01006820
[ODTX] human metagenome; G_DNA_Supragingival plaque
4534
4605
+
Gln
TTG
[ENA]
¡û
>WENV180947619
ODUG01000001
[ODUG] human metagenome; G_DNA_Tongue dorsum
141003
141074
+
Gln
TTG
[ENA]
¡û
>WENV180949212
ODUG01010398
[ODUG] human metagenome; G_DNA_Tongue dorsum
3383
3454
+
Gln
TTG
[ENA]
¡û
>WENV180950926
ODUH01004271
[ODUH] human metagenome; G_DNA_Subgingival plaque
4569
4640
+
Gln
TTG
[ENA]
¡û
>WENV180954259
ODUJ01001162
[ODUJ] human metagenome; G_DNA_Tongue dorsum
3760
3831
+
Gln
TTG
[ENA]
¡û
>WENV180977171
ODUZ01000043
[ODUZ] human metagenome; G_DNA_Tongue dorsum
16489
16560
+
Gln
TTG
[ENA]
¡û
>WENV180986945
ODVK01002273
[ODVK] human metagenome; G_DNA_Supragingival plaque
6801
6872
+
Gln
TTG
[ENA]
¡û
>WENV180992556
ODVP01036489
[ODVP] human metagenome; G_DNA_Buccal mucosa
191
120
-
Gln
TTG
[ENA]
¡û
>WENV180999003
ODVT01004403
[ODVT] human metagenome; G_DNA_Buccal mucosa
2829
2758
-
Gln
TTG
[ENA]
¡û
>WENV181010952
ODWI01001658
[ODWI] human metagenome; G_DNA_Tongue dorsum
3345
3416
+
Gln
TTG
[ENA]
¡û
>WENV181017820
ODWS01029283
[ODWS] human metagenome; G_DNA_Buccal mucosa
153
82
-
Gln
TTG
[ENA]
¡û
>WENV181027424
ODXD01001603
[ODXD] human metagenome; G_DNA_Buccal mucosa
3335
3406
+
Gln
TTG
[ENA]
¡û
>WENV181029430
ODXF01000255
[ODXF] human metagenome; G_DNA_Supragingival plaque
22489
22418
-
Gln
TTG
[ENA]
¡û
>WENV181044281
ODXV01005367
[ODXV] human metagenome; G_DNA_Tongue dorsum
1688
1617
-
Gln
TTG
[ENA]
¡û
>WENV181051555
ODYE01000245
[ODYE] human metagenome; G_DNA_Tongue dorsum
13008
12937
-
Gln
TTG
[ENA]
¡û
>WENV181063032
ODYP01000030
[ODYP] human metagenome; G_DNA_Supragingival plaque
54683
54612
-
Gln
TTG
[ENA]
¡û
>WENV181063619
ODYP01001894
[ODYP] human metagenome; G_DNA_Supragingival plaque
1945
1874
-
Gln
TTG
[ENA]
¡û
>WENV181066796
ODZI01001911
[ODZI] human metagenome; G_DNA_Supragingival plaque
191
120
-
Gln
TTG
[ENA]
¡û
>WENV181067208
ODZI01009105
[ODZI] human metagenome; G_DNA_Supragingival plaque
3120
3191
+
Gln
TTG
[ENA]
¡û
>WENV181074005
OEAO01002344
[OEAO] human metagenome; G_DNA_Tongue dorsum
1973
1902
-
Gln
TTG
[ENA]
¡û
>WENV181077913
OEAP01238709
[OEAP] human metagenome; G_DNA_Supragingival plaque
5
76
+
Gln
TTG
[ENA]
¡û
>WENV181078252
OEAQ01058405
[OEAQ] human metagenome; G_DNA_Buccal mucosa
29
100
+
Gln
TTG
[ENA]
¡û
>WENV181082699
OEAV01000283
[OEAV] human metagenome; G_DNA_Supragingival plaque
30812
30883
+
Gln
TTG
[ENA]
¡û
>WENV181082759
OEAV01000482
[OEAV] human metagenome; G_DNA_Supragingival plaque
5970
5899
-
Gln
TTG
[ENA]
¡û
>WENV181085186
OEAX01002654
[OEAX] human metagenome; G_DNA_Tongue dorsum
3515
3586
+
Gln
TTG
[ENA]
¡û
>WENV181101226
OECM01022270
[OECM] human metagenome; G_DNA_Buccal mucosa
134
205
+
Gln
TTG
[ENA]
¡û
>WENV181103828
OECV01004976
[OECV] human metagenome; G_DNA_Throat
173
244
+
Gln
TTG
[ENA]
¡û
>WENV181121034
OEFL01000177
[OEFL] human metagenome; G_DNA_Supragingival plaque
177
106
-
Gln
TTG
[ENA]
¡û
>WENV181141121
OEGT01001368
[OEGT] human metagenome; G_DNA_Throat
1605
1534
-
Gln
TTG
[ENA]
¡û
>WENV181144148
OEHM01130204
[OEHM] human metagenome; G_DNA_Supragingival plaque
27
98
+
Gln
TTG
[ENA]
¡û
>WENV181149900
OEHW01000034
[OEHW] human metagenome; G_DNA_Tongue dorsum
8725
8796
+
Gln
TTG
[ENA]
¡û
>WENV181157214
OEIG01000888
[OEIG] human metagenome; G_DNA_Hard palate
3338
3409
+
Gln
TTG
[ENA]
¡û
>WENV181180274
OEJT01185074
[OEJT] human metagenome; G_DNA_Supragingival plaque
175
104
-
Gln
TTG
[ENA]
¡û
>WENV181181395
OEJU01032585
[OEJU] human metagenome; G_DNA_Supragingival plaque
384
455
+
Gln
TTG
[ENA]
¡û
>WENV181181599
OEJV01000009
[OEJV] human metagenome; G_DNA_Supragingival plaque
98093
98022
-
Gln
TTG
[ENA]
¡û
>WENV181181873
OEJV01000504
[OEJV] human metagenome; G_DNA_Supragingival plaque
183
112
-
Gln
TTG
[ENA]
¡û
>WENV181182092
OEJV01002203
[OEJV] human metagenome; G_DNA_Supragingival plaque
5485
5556
+
Gln
TTG
[ENA]
¡û
>WENV181774363
OGRE01013770
[OGRE] human gut metagenome; faeces
616
545
-
Gln
CTG
[ENA]
¡û
>WENV181868157
OGWW01027605
[OGWW] human gut metagenome; faeces
570
499
-
Gln
TTG
[ENA]
¡û
>WENV182004964
OHBE01001126
[OHBE] human gut metagenome; faeces
19610
19539
-
Gln
CTG
[ENA]
¡û
>C08007303
AP009380
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [AP009380]
1530170
1530097
-
Gln
CTG
[Ensembl]
¡û
>WENV183507978
OMHA01000148
[OMHA] human oral metagenome; human oral
1157
1086
-
Gln
CTG
[ENA]
¡û
>WENV183508111
OMHB01001033
[OMHB] human oral metagenome; human oral
228
299
+
Gln
TTG
[ENA]
¡û
>WENV183508896
OMHF01013488
[OMHF] human oral metagenome; human oral
323
394
+
Gln
TTG
[ENA]
¡û
>WENV183509057
OMHG01003607
[OMHG] human oral metagenome; human oral
698
627
-
Gln
TTG
[ENA]
¡û
>WENV183704347
PDWI01000170
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
46769
46698
-
Gln
CTG
[ENA]
¡û
>WENV183704418
PDWI01000215
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
97407
97478
+
Gln
CTG
[ENA]
¡û
>WENV183704892
PDWI01000736
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
52857
52928
+
Gln
CTG
[ENA]
¡û
>WENV183706226
PDWI01003496
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
26
97
+
Gln
CTG
[ENA]
¡û
>WENV183707067
PDWI01006580
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
4106
4177
+
Gln
CTG
[ENA]
¡û
>WENV183707398
PDWI01008261
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
7826
7755
-
Gln
CTG
[ENA]
¡û
>WENV183708560
PDWI01017417
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
7273
7202
-
Gln
CTG
[ENA]
¡û
>WENV183708772
PDWI01019647
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2109
2038
-
Gln
CTG
[ENA]
¡û
>WENV183712149
PDWI01090485
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
134
205
+
Gln
CTG
[ENA]
¡û
>WENV183714181
PDWI01172424
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1363
1434
+
Gln
CTG
[ENA]
¡û
>WENV183714744
PDWI01201266
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1014
1085
+
Gln
CTG
[ENA]
¡û
>WENV183721577
PDWJ01075830
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
778
849
+
Gln
CTG
[ENA]
¡û
>C181102065
CP024591
Bacteroidota
Porphyromonas gingivalis KCOM 2802 [CP024591]
39887
39958
+
Gln
CTG
-
¡û
>C181102180
CP024593
Bacteroidota
Porphyromonas gingivalis KCOM 2804 [CP024593]
2176334
2176405
+
Gln
CTG
-
¡û
>C181102221
CP024594
Bacteroidota
Porphyromonas gingivalis KCOM 2805 [CP024594]
1163124
1163195
+
Gln
CTG
-
¡û
>C181102298
CP024595
Bacteroidota
Porphyromonas gingivalis KCOM 3001 [CP024595]
1247401
1247330
-
Gln
CTG
-
¡û
>C181102322
CP024596
Bacteroidota
Porphyromonas gingivalis KCOM 3131 [CP024596]
1610958
1611029
+
Gln
CTG
-
¡û
>C181102485
CP024599
Bacteroidota
Porphyromonas gingivalis KCOM 2800 [CP024599]
1883487
1883558
+
Gln
CTG
-
¡û
>C181102553
CP024601
Bacteroidota
Porphyromonas gingivalis KCOM 2799 [CP024601]
32498
32569
+
Gln
CTG
-
¡û
>C181123607
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
1556067
1555996
-
Gln
CTG
-
¡û
>C181123635
CP025931
Bacteroidota
Porphyromonas gingivalis TDC 60 [CP025931]
911229
911300
+
Gln
CTG
-
¡û
>C181123685
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
1100185
1100256
+
Gln
CTG
-
¡û
>W141740411
JNOS01000003
Bacteroidota
Porphyromonas sp. KLE 1280 [JNOS]
71086
71013
-
Gln
TTG
[ENA]
¡û
>W1910371029
FUFB01000043
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
9821
9750
-
Gln
CTG
[ENA]
¡û
>W1910371084
FUFC01000051
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
26927
26998
+
Gln
CTG
[ENA]
¡û
>W1910371150
FUFE01000061
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
27018
26947
-
Gln
CTG
[ENA]
¡û
>W1910371250
FUFG01000045
Bacteroidota
Porphyromonas gingivalis 84_3 [FUFG]
21874
21945
+
Gln
CTG
[ENA]
¡û
>W1910371290
FUFH01000052
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
4147
4076
-
Gln
CTG
[ENA]
¡û
>W1910371327
FUFI01000027
Bacteroidota
Porphyromonas gingivalis SU60 [FUFI]
158917
158846
-
Gln
CTG
[ENA]
¡û
>W1910372563
FUGF01000023
Bacteroidota
Porphyromonas gingivalis 15_9 [FUGF]
9932
9861
-
Gln
CTG
[ENA]
¡û
>W1910372630
FUGG01000059
Bacteroidota
Porphyromonas gingivalis 13_1 [FUGG]
27119
27048
-
Gln
CTG
[ENA]
¡û
>W1911247364
NSLL01000007
Bacteroidota
Porphyromonas gingivalis WW5127 [NSLL]
22068
22139
+
Gln
CTG
[ENA]
¡û
>W1911247432
NSLM01000019
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
23364
23435
+
Gln
CTG
[ENA]
¡û
>W1911247558
NSLP01000034
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
20674
20603
-
Gln
CTG
[ENA]
¡û
>W1911247623
NSLR01000007
Bacteroidota
Porphyromonas gingivalis WW2931 [NSLR]
56349
56420
+
Gln
CTG
[ENA]
¡û
>W1911247756
NSLU01000022
Bacteroidota
Porphyromonas gingivalis WW2881 [NSLU]
23634
23705
+
Gln
CTG
[ENA]
¡û
>W1911247833
NSLW01000001
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
206260
206189
-
Gln
CTG
[ENA]
¡û
>C151089033
CP011995
Bacteroidota
Porphyromonas gingivalis A7436 [CP011995]
855646
855719
+
Gln
CTG
-
¡û
>C151089080
CP011996
Bacteroidota
Porphyromonas gingivalis AJW4 [CP011996]
740996
741069
+
Gln
CTG
-
¡û
>W2010400403
FUFB01000043
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
9821
9750
-
Gln
CTG
[ENA]
¡û
>W2010400458
FUFC01000051
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
26927
26998
+
Gln
CTG
[ENA]
¡û
>W2010400524
FUFE01000061
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
27018
26947
-
Gln
CTG
[ENA]
¡û
>W2010400624
FUFG01000045
Bacteroidota
Porphyromonas gingivalis 84_3 [FUFG]
21874
21945
+
Gln
CTG
[ENA]
¡û
>W2010400664
FUFH01000052
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
4147
4076
-
Gln
CTG
[ENA]
¡û
>W2010400701
FUFI01000027
Bacteroidota
Porphyromonas gingivalis SU60 [FUFI]
158917
158846
-
Gln
CTG
[ENA]
¡û
>W2010401353
FUGF01000023
Bacteroidota
Porphyromonas gingivalis 15_9 [FUGF]
9932
9861
-
Gln
CTG
[ENA]
¡û
>W2010401420
FUGG01000059
Bacteroidota
Porphyromonas gingivalis 13_1 [FUGG]
27119
27048
-
Gln
CTG
[ENA]
¡û
>W2011070869
NSLL01000007
Bacteroidota
Porphyromonas gingivalis WW5127 [NSLL]
22068
22139
+
Gln
CTG
[ENA]
¡û
>W2011070937
NSLM01000019
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
23364
23435
+
Gln
CTG
[ENA]
¡û
>W2011071063
NSLP01000034
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
20674
20603
-
Gln
CTG
[ENA]
¡û
>W2011071128
NSLR01000007
Bacteroidota
Porphyromonas gingivalis WW2931 [NSLR]
56349
56420
+
Gln
CTG
[ENA]
¡û
>W2011071234
NSLT01000032
Bacteroidota
Porphyromonas gingivalis WW2885 [NSLT]
19617
19546
-
Gln
CTG
[ENA]
¡û
>W2011071261
NSLU01000022
Bacteroidota
Porphyromonas gingivalis WW2881 [NSLU]
23634
23705
+
Gln
CTG
[ENA]
¡û
>W2011071338
NSLW01000001
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
206260
206189
-
Gln
CTG
[ENA]
¡û
>W2011559734
SGAZ01000023
Bacteroidota
Porphyromonas gingivalis H3 [SGAZ]
10766
10695
-
Gln
CTG
[ENA]
¡û
>W2011559774
SGBA01000016
Bacteroidota
Porphyromonas gingivalis CP3 [SGBA]
19558
19487
-
Gln
CTG
[ENA]
¡û
>W2011835814
UGTE01000001
Bacteroidota
Porphyromonas endodontalis NCTC13058 [UGTE]
233452
233523
+
Gln
TTG
[ENA]
¡û
>W2110035754
BMPU01000002
Bacteroidota
Porphyromonas pasteri JCM 30531 [BMPU]
347968
348039
+
Gln
TTG
[ENA]
¡û
>C211321226
CP073348
Bacteroidota
Porphyromonas gingivalis GMU202011 [CP073348]
1138924
1138853
-
Gln
CTG
-
¡û
>C211321298
CP073350
Bacteroidota
Porphyromonas gingivalis LyG-2 [CP073350]
1244532
1244603
+
Gln
CTG
-
¡û
>C211404427
CP083629
Bacteroidota
Porphyromonas endodontalis FDAARGOS_1506 [CP083629]
1589457
1589386
-
Gln
TTG
-
¡û
>C231311414
CP092048
Bacteroidota
Porphyromonas gingivalis W50 [CP092048]
1316674
1316603
-
Gln
CTG
-
¡û
>C231311463
CP092049
Bacteroidota
Porphyromonas gingivalis W50/BE1 [CP092049]
1315048
1314977
-
Gln
CTG
-
¡û
>C231580450
CP116612
Bacteroidota
Porphyromonas gingivalis A7436-C [CP116612]
855636
855707
+
Gln
CTG
-
¡û
>C231580499
CP116613
Bacteroidota
Porphyromonas gingivalis HG1691old [CP116613]
936129
936200
+
Gln
CTG
-
¡û
>C241193204
CP098924
Bacteroidota
Porphyromonas gingivalis yellow [CP098924]
838881
838952
+
Gln
CTG
-
¡û
>C241193253
CP098925
Bacteroidota
Porphyromonas gingivalis grey [CP098925]
838880
838951
+
Gln
CTG
-
¡û
>C241268129
CP126309
Bacteroidota
Porphyromonas gingivalis LyEC01 [CP126309]
861195
861266
+
Gln
CTG
-
¡û
>C241274238
CP126983
Bacteroidota
Porphyromonas gingivalis LyEC02 [CP126983]
859758
859829
+
Gln
CTG
-
¡û
>W1511328354
JQJE01000017
Bacteroidota
Porphyromonas gulae OH3161B [JQJE]
13612
13685
+
Gln
CTG
[ENA]
¡û
>W1511336119
JQZY01000009
Bacteroidota
Porphyromonas sp. COT-052 OH4946 [JQZY]
333946
334019
+
Gln
CTG
[ENA]
¡û
>W1511336369
JRAE01000070
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
55853
55926
+
Gln
CTG
[ENA]
¡û
>W1511336406
JRAF01000045
Bacteroidota
Porphyromonas gulae COT-052 OH3498 [JRAF]
9537
9610
+
Gln
CTG
[ENA]
¡û
>W1511336435
JRAG01000007
Bacteroidota
Porphyromonas gulae COT-052 OH1355 [JRAG]
9691
9764
+
Gln
CTG
[ENA]
¡û
>W1511336598
JRAJ01000017
Bacteroidota
Porphyromonas gulae COT-052 OH2179 [JRAJ]
121191
121264
+
Gln
CTG
[ENA]
¡û
>W1511336623
JRAK01000073
Bacteroidota
Porphyromonas gulae COT-052 OH3439 [JRAK]
5915
5988
+
Gln
CTG
[ENA]
¡û
>W1511336667
JRAL01000023
Bacteroidota
Porphyromonas gulae COT-052 OH4119 [JRAL]
11542
11615
+
Gln
CTG
[ENA]
¡û
>W1511336833
JRAQ01000021
Bacteroidota
Porphyromonas gulae COT-052 OH3471 [JRAQ]
42670
42743
+
Gln
CTG
[ENA]
¡û
>W1511336947
JRAT01000014
Bacteroidota
Porphyromonas gulae COT-052 OH3856 [JRAT]
125164
125237
+
Gln
CTG
[ENA]
¡û
>W1511343874
JRFC01000014
Bacteroidota
Porphyromonas sp. COT-290 OH3588 [JRFC]
48294
48367
+
Gln
TTG
[ENA]
¡û
>W1511343949
JRFD01000052
Bacteroidota
Porphyromonas gulae COT-052 OH2857 [JRFD]
30813
30740
-
Gln
CTG
[ENA]
¡û
>C161018136
CP007756
Bacteroidota
Porphyromonas gingivalis HG66 [CP007756]
1226364
1226437
+
Gln
CTG
[Ensembl]
¡û
>C161046948
CP012889
Bacteroidota
Porphyromonas gingivalis 381 [CP012889]
1554148
1554075
-
Gln
CTG
-
¡û
>W1610060528
BCBV01000026
Bacteroidota
Porphyromonas gingivalis [BCBV]
52965
52892
-
Gln
CTG
[ENA]
¡û
>W1610784248
LOEL01000026
Bacteroidota
Porphyromonas gingivalis [LOEL]
5276
5349
+
Gln
CTG
[ENA]
¡û
>W1610907526
LSDJ01000093
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
170
97
-
Gln
TTG
[ENA]
¡û
>W1610907567
LSDK01000093
Bacteroidota
Porphyromonas somerae [LSDK]
170
97
-
Gln
TTG
[ENA]
¡û
>W1710017884
ASYM01000069
Bacteroidota
Porphyromonas gingivalis SJD4 [ASYM]
19603
19530
-
Gln
CTG
[ENA]
¡û
>W1710017923
ASYN01000114
Bacteroidota
Porphyromonas gingivalis SJD5 [ASYN]
19571
19498
-
Gln
CTG
[ENA]
¡û
>W1710018033
ASYP01000141
Bacteroidota
Porphyromonas gingivalis SJD12 [ASYP]
7872
7799
-
Gln
CTG
[ENA]
¡û
>W1710057783
BCBV01000026
Bacteroidota
Porphyromonas gingivalis [BCBV]
52965
52892
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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