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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.471987 (4 seq.)
>W1711206791
LXEY01000021
Actinomycetota
Enteractinococcus helveticum [LXEY]
269206
269282
+
Arg
TCT
[ENA]
¡û
>W2012020841
VFOU01000002
Actinomycetota
Enteractinococcus coprophilus DSM 24083 [VFOU]
175877
175803
-
Arg
TCT
[ENA]
¡û
>W1511508108
JXOH01000119
Alphaproteobacteria
Mesorhizobium hungaricum UASWS1009 [JXOH]
269206
269282
+
Arg
TCT
[ENA]
¡û
>W1610995043
LXEY01000021
Actinomycetota
Enteractinococcus helveticum [LXEY]
269206
269282
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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