Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.498936 (142 seq.)
	>W131010415	AHYM01000001	Bacillota	Lactococcus garvieae ATCC 49156 [AHYM]	6404	6474	+	Gly	TCC	[ENA]	○
	>W131010435	AHYM01000008	Bacillota	Lactococcus garvieae ATCC 49156 [AHYM]	190370	190300	-	Gly	TCC	[ENA]	○
	>W1710859034	LMBW01000001	Bacillota	Fredinandcohnia humi [LMBW]	48336	48409	+	Gly	TCC	[ENA]	○
	>W1710859044	LMBW01000009	Bacillota	Fredinandcohnia humi [LMBW]	961	1034	+	Gly	TCC	[ENA]	○
	>W1710859171	LMBY01000006	Bacillota	Cytobacillus dafuensis FJAT-25496 [LMBY]	359852	359779	-	Gly	TCC	[ENA]	○
	>W1710881860	LMTJ01000005	Bacillota	Bacillus sp. FJAT-29814 [LMTJ]	1830	1903	+	Gly	TCC	[ENA]	○
	>W1710881886	LMTJ01000008	Bacillota	Bacillus sp. FJAT-29814 [LMTJ]	22358	22431	+	Gly	TCC	[ENA]	○
	>W131037529	AMFD01000024	Bacillota	Lactococcus garvieae I113 [AMFD]	24605	24675	+	Gly	TCC	[ENA]	○
	>W131037533	AMFD01000028	Bacillota	Lactococcus garvieae I113 [AMFD]	103	173	+	Gly	TCC	[ENA]	○
	>W131037587	AMFE01000092	Bacillota	Lactococcus garvieae Tac2 [AMFE]	188	118	-	Gly	TCC	[ENA]	○
	>W1711006250	LQOE01000086	Bacillota	Lactococcus sp. DD01 [LQOE]	9222	9152	-	Gly	TCC	[ENA]	○
	>W1711006264	LQOE01000104	Bacillota	Lactococcus sp. DD01 [LQOE]	6150	6080	-	Gly	TCC	[ENA]	○
	>W1711018658	LQXD01000001	Bacillota	Anaerobacillus isosaccharinicus NB2006 [LQXD]	190672	190599	-	Gly	TCC	[ENA]	○
	>W1711018693	LQXD01000007	Bacillota	Anaerobacillus isosaccharinicus NB2006 [LQXD]	1977	2050	+	Gly	TCC	[ENA]	○
	>W1711018714	LQXD01000011	Bacillota	Anaerobacillus isosaccharinicus NB2006 [LQXD]	1784	1857	+	Gly	TCC	[ENA]	○
	>W1711020369	LQYN01000169	Bacillota	Heyndrickxia sporothermodurans [LQYN]	78474	78401	-	Gly	TCC	[ENA]	○
	>W1711130284	LUUQ01000002	Bacillota	Neobacillus mesonae [LUUQ]	1714906	1714833	-	Gly	TCC	[ENA]	○
	>W1711130303	LUUQ01000002	Bacillota	Neobacillus mesonae [LUUQ]	1212148	1212075	-	Gly	TCC	[ENA]	○
	>W1711130332	LUUQ01000005	Bacillota	Neobacillus mesonae [LUUQ]	52998	53071	+	Gly	TCC	[ENA]	○
	>W1711228299	LXWL01000001	Bacillota	Lactococcus garvieae [LXWL]	24699	24769	+	Gly	TCC	[ENA]	○
	>W1711228321	LXWL01000008	Bacillota	Lactococcus garvieae [LXWL]	71394	71324	-	Gly	TCC	[ENA]	○
	>W131202445	ASWT01000006	Bacillota	Lactococcus garvieae ATCC 49156 [ASWT]	1611	1681	+	Gly	TCC	[ENA]	○
	>W131202458	ASWT01000006	Bacillota	Lactococcus garvieae ATCC 49156 [ASWT]	1542620	1542550	-	Gly	TCC	[ENA]	○
	>W1711525498	MLQR01000001	Bacillota	Anaerobacillus alkalilacustris [MLQR]	785918	785845	-	Gly	TCC	[ENA]	○
	>W1711525501	MLQR01000001	Bacillota	Anaerobacillus alkalilacustris [MLQR]	785578	785505	-	Gly	TCC	[ENA]	○
	>W1711525515	MLQR01000001	Bacillota	Anaerobacillus alkalilacustris [MLQR]	782713	782640	-	Gly	TCC	[ENA]	○
	>W1711525540	MLQR01000001	Bacillota	Anaerobacillus alkalilacustris [MLQR]	283805	283732	-	Gly	TCC	[ENA]	○
	>W1711525571	MLQR01000006	Bacillota	Anaerobacillus alkalilacustris [MLQR]	2072	2145	+	Gly	TCC	[ENA]	○
	>W1711525608	MLQR01000014	Bacillota	Anaerobacillus alkalilacustris [MLQR]	624	551	-	Gly	TCC	[ENA]	○
	>W1711539001	MLYR01000146	Bacillota	Bacillus sp. MUM 116 [MLYR]	2055	2128	+	Gly	TCC	[ENA]	○
	>W1711624303	MPHG01000005	Bacillota	Bacillus obstructivus VT-16-70 [MPHG]	2064	1991	-	Gly	TCC	[ENA]	○
	>W1711624328	MPHG01000062	Bacillota	Bacillus obstructivus VT-16-70 [MPHG]	358509	358436	-	Gly	TCC	[ENA]	○
	>W1711624362	MPHG01000157	Bacillota	Bacillus obstructivus VT-16-70 [MPHG]	168	95	-	Gly	TCC	[ENA]	○
	>W1711624370	MPHG01000178	Bacillota	Bacillus obstructivus VT-16-70 [MPHG]	138867	138794	-	Gly	TCC	[ENA]	○
	>W1711722857	MTLA01000038	Bacillota	Heyndrickxia oleronia oleronius [MTLA]	29192	29265	+	Gly	TCC	[ENA]	○
	>W1711722885	MTLA01000060	Bacillota	Heyndrickxia oleronia oleronius [MTLA]	9406	9333	-	Gly	TCC	[ENA]	○
	>W1711722934	MTLA01000130	Bacillota	Heyndrickxia oleronia oleronius [MTLA]	2320	2393	+	Gly	TCC	[ENA]	○
	>W1711744858	MUIZ01000003	Bacillota	Lactococcus petauri 159469 [MUIZ]	328107	328037	-	Gly	TCC	[ENA]	○
	>W1711744891	MUIZ01000011	Bacillota	Lactococcus petauri 159469 [MUIZ]	702	772	+	Gly	TCC	[ENA]	○
	>W1711942755	NBBK01000002	Bacillota	Lactococcus garvieae [NBBK]	25575	25505	-	Gly	TCC	[ENA]	○
	>W1711942764	NBBK01000006	Bacillota	Lactococcus garvieae [NBBK]	354299	354229	-	Gly	TCC	[ENA]	○
	>WENV180014260	FPIC01120136	[FPIC] soil metagenome; Soil		103	30	-	Gly	TCC	[ENA]	◯
	>WENV180182125	OAWO01000662	[OAWO] human gut metagenome; faeces		12001	11931	-	Gly	TCC	[ENA]	◯
	>W141054004	AODD01000007	Bacillota	Listeria grandensis FSL F6-971 [AODD]	88711	88782	+	Gly	TCC	[ENA]	○
	>W141054071	AODE01000012	Bacillota	Listeria cornellensis FSL F6-969 [AODE]	1739	1668	-	Gly	TCC	[ENA]	○
	>W141054408	AODJ01000037	Bacillota	Listeria weihenstephanensis FSL R9-0317 [AODJ]	90123	90052	-	Gly	TCC	[ENA]	○
	>W141054445	AODK01000008	Bacillota	Listeria rocourtiae FSL F6-920 [AODK]	39796	39725	-	Gly	TCC	[ENA]	○
	>W141054516	AODL01000013	Bacillota	Listeria riparia FSL S10-1204 [AODL]	87810	87739	-	Gly	TCC	[ENA]	○
	>W141234292	BAWM01000020	Bacillota	Neobacillus niacini [BAWM]	635569	635496	-	Gly	TCC	[ENA]	○
	>W141234317	BAWM01000097	Bacillota	Neobacillus niacini [BAWM]	235	162	-	Gly	TCC	[ENA]	○
	>W141234344	BAWM01000114	Bacillota	Neobacillus niacini [BAWM]	82354	82281	-	Gly	TCC	[ENA]	○
	>W141234364	BAWM01000139	Bacillota	Neobacillus niacini [BAWM]	80025	80098	+	Gly	TCC	[ENA]	○
	>W141234370	BAWM01000146	Bacillota	Neobacillus niacini [BAWM]	1128	1201	+	Gly	TCC	[ENA]	○
	>W141234387	BAWM01000152	Bacillota	Neobacillus niacini [BAWM]	298753	298680	-	Gly	TCC	[ENA]	○
	>W141238086	BBJW01000006	Bacillota	Lactococcus garvieae NBRC 100934 [BBJW]	146468	146398	-	Gly	TCC	[ENA]	○
	>W141238104	BBJW01000023	Bacillota	Lactococcus garvieae NBRC 100934 [BBJW]	573	643	+	Gly	TCC	[ENA]	○
	>WENV182518747	OIWP01001968	[OIWP] human gut metagenome; faeces		22673	22603	-	Gly	TCC	[ENA]	◯
	>W141260494	CCAD010000020	Bacillota	Neobacillus dielmonensis FF4 [CCAD]	20726	20799	+	Gly	TCC	[ENA]	○
	>W141260512	CCAD010000028	Bacillota	Neobacillus dielmonensis FF4 [CCAD]	11152	11225	+	Gly	TCC	[ENA]	○
	>W141260550	CCAD010000067	Bacillota	Neobacillus dielmonensis FF4 [CCAD]	2006	2079	+	Gly	TCC	[ENA]	○
	>W141260567	CCAD010000068	Bacillota	Neobacillus dielmonensis FF4 [CCAD]	1578	1651	+	Gly	TCC	[ENA]	○
	>W141260588	CCAD010000070	Bacillota	Neobacillus dielmonensis FF4 [CCAD]	9114	9041	-	Gly	TCC	[ENA]	○
	>WENV170547761	CXTS01000396	[CXTS] Human gut metagenome genome assembly, contig: mD5_contig000819.; ENVO:feces		210	280	+	Gly	TCC	[ENA]	◯
	>WENV170547785	CXTS01000701	[CXTS] Human gut metagenome genome assembly, contig: mD5_contig000819.; ENVO:feces		460	530	+	Gly	TCC	[ENA]	◯
	>WENV170547789	CXTS01000726	[CXTS] Human gut metagenome genome assembly, contig: mD5_contig000819.; ENVO:feces		267	337	+	Gly	TCC	[ENA]	◯
	>WENV170547927	CXTV01000028	[CXTV] Human gut metagenome genome assembly, contig: mB2_contig000833.; ENVO:feces		27	97	+	Gly	TCC	[ENA]	◯
	>WENV170548315	CXUD01001253	[CXUD] Human gut metagenome genome assembly, contig: mA2_contig002203.; ENVO:feces		728	658	-	Gly	TCC	[ENA]	◯
	>WENV170548320	CXUD01001350	[CXUD] Human gut metagenome genome assembly, contig: mA2_contig002203.; ENVO:feces		414	344	-	Gly	TCC	[ENA]	◯
	>WENV170549784	CXVI01000615	[CXVI] Human gut metagenome genome assembly, contig: mF4_contig002506.; ENVO:feces		183	113	-	Gly	TCC	[ENA]	◯
	>WENV170549810	CXVI01001354	[CXVI] Human gut metagenome genome assembly, contig: mF4_contig002506.; ENVO:feces		373	303	-	Gly	TCC	[ENA]	◯
	>C181001725	AP017373	Bacillota	Lactococcus formosensis 122061 [AP017373]	1624665	1624735	+	Gly	TCC	-	○
	>C181001737	AP017373	Bacillota	Lactococcus formosensis 122061 [AP017373]	1189076	1189006	-	Gly	TCC	-	○
	>C191008671	CP011102	Bacillota	Listeria weihenstephanensis WS 4560 [CP011102]	1283887	1283958	+	Gly	TCC	-	○
	>C191020680	CP022572	Bacillota	Neobacillus mesonae H20-5 [CP022572]	316555	316628	+	Gly	TCC	-	○
	>C191020725	CP022572	Bacillota	Neobacillus mesonae H20-5 [CP022572]	4927987	4927914	-	Gly	TCC	-	○
	>C191020744	CP022572	Bacillota	Neobacillus mesonae H20-5 [CP022572]	4442563	4442490	-	Gly	TCC	-	○
	>C191044508	CP026502	Bacillota	Lactococcus garvieae JJJN1 [CP026502]	23484	23554	+	Gly	TCC	-	○
	>C191044555	CP026502	Bacillota	Lactococcus garvieae JJJN1 [CP026502]	1581444	1581374	-	Gly	TCC	-	○
	>W141702635	JMLP01000011	Bacillota	Bacillus sp. UNC41MFS5 [JMLP]	366437	366364	-	Gly	TCC	[ENA]	○
	>W141702658	JMLP01000033	Bacillota	Bacillus sp. UNC41MFS5 [JMLP]	26457	26384	-	Gly	TCC	[ENA]	○
	>W1910178379	BJEY01000004	Bacillota	Listeria newyorkensis Ln2-1 [BJEY]	183157	183228	+	Gly	TCC	[ENA]	○
	>W1910231339	FPDX01000001	Bacillota	Bacillus massilionigeriensis Marseille-P2348 [FPDX]	423661	423734	+	Gly	TCC	[ENA]	○
	>W1910231404	FPDX01000006	Bacillota	Bacillus massilionigeriensis Marseille-P2348 [FPDX]	966020	965947	-	Gly	TCC	[ENA]	○
	>W1910231455	FPDX01000018	Bacillota	Bacillus massilionigeriensis Marseille-P2348 [FPDX]	629	702	+	Gly	TCC	[ENA]	○
	>W1910641553	LTDA01000011	Bacillota	Lactococcus garvieae KS1546 [LTDA]	24635	24705	+	Gly	TCC	[ENA]	○
	>W1910641572	LTDA01000016	Bacillota	Lactococcus garvieae KS1546 [LTDA]	22660	22590	-	Gly	TCC	[ENA]	○
	>W1910777226	MPDH01000005	Bacillota	Listeria newyorkensis F1604011-044 [MPDH]	40290	40219	-	Gly	TCC	[ENA]	○
	>W1910843293	NAZC01000075	Bacillota	Heyndrickxia sporothermodurans BR12 [NAZC]	509	436	-	Gly	TCC	[ENA]	○
	>W1910843390	NAZD01000079	Bacillota	Heyndrickxia sporothermodurans DSM 10599 [NAZD]	5373	5300	-	Gly	TCC	[ENA]	○
	>W1911146364	NPDD01000077	Bacillota	Bacillus sp. 7884-1 [NPDD]	1263	1336	+	Gly	TCC	[ENA]	○
	>W1911146370	NPDD01000209	Bacillota	Bacillus sp. 7884-1 [NPDD]	86	13	-	Gly	TCC	[ENA]	○
	>W1911146390	NPDD01000368	Bacillota	Bacillus sp. 7884-1 [NPDD]	76	3	-	Gly	TCC	[ENA]	○
	>W1911708135	QOUX01000030	Bacillota	Anaerobacillus alkaliphilus B16-10 [QOUX]	90325	90398	+	Gly	TCC	[ENA]	○
	>W1911708193	QOUX01000047	Bacillota	Anaerobacillus alkaliphilus B16-10 [QOUX]	667533	667462	-	Gly	TCC	[ENA]	○
	>W1810907539	QVHV01000001	Bacillota	Lactococcus petauri AM13-9 [QVHV]	407560	407490	-	Gly	TCC	[ENA]	○
	>W1810907574	QVHV01000008	Bacillota	Lactococcus petauri AM13-9 [QVHV]	667	737	+	Gly	TCC	[ENA]	○
	>W1510001367	AZHN01000014	Bacillota	Listeria newyorkensis 1903 [AZHN]	78321	78392	+	Gly	TCC	[ENA]	○
	>W1510060339	CCXF01000001	Bacillota	Lactococcus garvieae MT14 [CCXF]	1144589	1144519	-	Gly	TCC	[ENA]	○
	>W1510650546	CVRB01000001	Bacillota	Neobacillus massiliamazoniensis LF1 [CVRB]	2255	2328	+	Gly	TCC	[ENA]	○
	>W1510650597	CVRB01000004	Bacillota	Neobacillus massiliamazoniensis LF1 [CVRB]	878661	878588	-	Gly	TCC	[ENA]	○
	>C11112678	AP009332	Bacillota	Lactococcus garvieae ATCC 49156 [AP009332]	23485	23555	+	Gly	TCC	[Ensembl]	○
	>C11112725	AP009332	Bacillota	Lactococcus garvieae ATCC 49156 [AP009332]	1564517	1564447	-	Gly	TCC	[Ensembl]	○
	>W1511221006	JNEZ01000044	Bacillota	Listeriaceae bacterium FSL A5-0209 [JNEZ]	5712	5641	-	Gly	TCC	[ENA]	○
	>W1511221056	JNFA01000023	Bacillota	Listeria booriae FSL A5-0281 [JNFA]	251488	251417	-	Gly	TCC	[ENA]	○
	>W1511221114	JNFB01000003	Bacillota	Listeria newyorkensis FSL M6-0635 [JNFB]	40240	40169	-	Gly	TCC	[ENA]	○
	>W1511314685	JPUJ01000017	Bacillota	Lactococcus garvieae Lg-ilsanpaik-gs201105 [JPUJ]	14646	14576	-	Gly	TCC	[ENA]	○
	>W1511314700	JPUJ01000035	Bacillota	Lactococcus garvieae Lg-ilsanpaik-gs201105 [JPUJ]	575	645	+	Gly	TCC	[ENA]	○
	>W11157452	AFCC01000013	Bacillota	Lactococcus garvieae 21881 [AFCC]	575	645	+	Gly	TCC	[ENA]	○
	>W11157465	AFCC01000050	Bacillota	Lactococcus garvieae 21881 [AFCC]	312	242	-	Gly	TCC	[ENA]	○
	>W11157488	AFCD01000004	Bacillota	Lactococcus garvieae 8831 [AFCD]	575	645	+	Gly	TCC	[ENA]	○
	>W11157499	AFCD01000040	Bacillota	Lactococcus garvieae 8831 [AFCD]	656	586	-	Gly	TCC	[ENA]	○
	>W11162775	AFHF01000018	Bacillota	Lactococcus garvieae UNIUD074 [AFHF]	31285	31215	-	Gly	TCC	[ENA]	○
	>W11162787	AFHF01000023	Bacillota	Lactococcus garvieae UNIUD074 [AFHF]	25638	25568	-	Gly	TCC	[ENA]	○
	>W121010273	AGJD01000004	Bacillota	Bacillus sp. 1NLA3E [AGJD]	330541	330468	-	Gly	TCC	[ENA]	○
	>W121010326	AGJD01000024	Bacillota	Bacillus sp. 1NLA3E [AGJD]	46871	46944	+	Gly	TCC	[ENA]	○
	>W121016366	AGQX01000083	Bacillota	Lactococcus garvieae TB25 [AGQX]	241	171	-	Gly	TCC	[ENA]	○
	>W121016418	AGQY01000134	Bacillota	Lactococcus garvieae LG9 [AGQY]	110	40	-	Gly	TCC	[ENA]	○
	>W121081198	AKFO01000008	Bacillota	Lactococcus garvieae IPLA 31405 [AKFO]	24647	24717	+	Gly	TCC	[ENA]	○
	>W121081212	AKFO01000012	Bacillota	Lactococcus garvieae IPLA 31405 [AKFO]	22673	22603	-	Gly	TCC	[ENA]	○
	>W1610072486	BCVA01000057	Bacillota	Neobacillus niacini NBRC 15566 [BCVA]	13	86	+	Gly	TCC	[ENA]	○
	>W1610072492	BCVA01000107	Bacillota	Neobacillus niacini NBRC 15566 [BCVA]	534	607	+	Gly	TCC	[ENA]	○
	>C131015741	CP005586	Bacillota	Bacillus sp. 1NLA3E [CP005586]	215962	216035	+	Gly	TCC	[Ensembl]	○
	>C131015759	CP005586	Bacillota	Bacillus sp. 1NLA3E [CP005586]	781600	781673	+	Gly	TCC	[Ensembl]	○
	>W1610721380	LMBW01000001	Bacillota	Fredinandcohnia humi [LMBW]	48336	48409	+	Gly	TCC	[ENA]	○
	>W1610721390	LMBW01000009	Bacillota	Fredinandcohnia humi [LMBW]	961	1034	+	Gly	TCC	[ENA]	○
	>W1610721517	LMBY01000006	Bacillota	Cytobacillus dafuensis FJAT-25496 [LMBY]	359852	359779	-	Gly	TCC	[ENA]	○
	>W1610743895	LMTJ01000005	Bacillota	Bacillus sp. FJAT-29814 [LMTJ]	1830	1903	+	Gly	TCC	[ENA]	○
	>W1610743921	LMTJ01000008	Bacillota	Bacillus sp. FJAT-29814 [LMTJ]	22358	22431	+	Gly	TCC	[ENA]	○
	>W1610856900	LQOE01000086	Bacillota	Lactococcus sp. DD01 [LQOE]	9222	9152	-	Gly	TCC	[ENA]	○
	>W1610856914	LQOE01000104	Bacillota	Lactococcus sp. DD01 [LQOE]	6150	6080	-	Gly	TCC	[ENA]	○
	>W1610868657	LQYN01000169	Bacillota	Heyndrickxia sporothermodurans [LQYN]	78474	78401	-	Gly	TCC	[ENA]	○
	>W1610941357	LUUQ01000002	Bacillota	Neobacillus mesonae [LUUQ]	1714906	1714833	-	Gly	TCC	[ENA]	○
	>W1610941376	LUUQ01000002	Bacillota	Neobacillus mesonae [LUUQ]	1212148	1212075	-	Gly	TCC	[ENA]	○
	>W1610941405	LUUQ01000005	Bacillota	Neobacillus mesonae [LUUQ]	52998	53071	+	Gly	TCC	[ENA]	○
	>W1611012216	LXWL01000001	Bacillota	Lactococcus garvieae [LXWL]	24699	24769	+	Gly	TCC	[ENA]	○
	>W1611012238	LXWL01000008	Bacillota	Lactococcus garvieae [LXWL]	71394	71324	-	Gly	TCC	[ENA]	○
	>W1710069688	BCVA01000057	Bacillota	Neobacillus niacini NBRC 15566 [BCVA]	13	86	+	Gly	TCC	[ENA]	○
	>W1710069694	BCVA01000107	Bacillota	Neobacillus niacini NBRC 15566 [BCVA]	534	607	+	Gly	TCC	[ENA]	○
	>W1710522833	FNHN01000012	Bacillota	Bacillus sp. OK048 [FNHN]	77004	76931	-	Gly	TCC	[ENA]	○
	>W1710522855	FNHN01000014	Bacillota	Bacillus sp. OK048 [FNHN]	2186	2259	+	Gly	TCC	[ENA]	○
	>W1710522904	FNHN01000025	Bacillota	Bacillus sp. OK048 [FNHN]	21067	20994	-	Gly	TCC	[ENA]	○
	>W1710609604	FXWM01000002	Bacillota	Bacillus sp. OV166 [FXWM]	236907	236980	+	Gly	TCC	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK