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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.51286 (211 seq.)
>W1711082562
LSUI01000034
Actinomycetota
Bifidobacterium bifidum [LSUI]
25299
25214
-
Ser
TGA
[ENA]
¡û
>W1711082659
LSUL01000009
Actinomycetota
Bifidobacterium bifidum [LSUL]
24971
24886
-
Ser
TGA
[ENA]
¡û
>W1711577656
MNQA01000001
Actinomycetota
Bifidobacterium sp. 56_9_plus [MNQA]
96725
96810
+
Ser
TGA
[ENA]
¡û
>W1711938044
NAQK01000009
Actinomycetota
Bifidobacterium bifidum [NAQK]
118548
118633
+
Ser
TGA
[ENA]
¡û
>W1711959091
NBYL01000002
Actinomycetota
Bifidobacterium bifidum [NBYL]
196008
195923
-
Ser
TGA
[ENA]
¡û
>W131043522
AMPM01000369
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
708
623
-
Ser
TGA
[ENA]
¡û
>WENV180127849
OATA01007163
[OATA] human gut metagenome; faeces
1741
1826
+
Ser
TGA
[ENA]
¢þ
>WENV180128633
OATB01000487
[OATB] human gut metagenome; faeces
24368
24453
+
Ser
TGA
[ENA]
¢þ
>WENV180132249
OATH01004254
[OATH] human gut metagenome; faeces
605
520
-
Ser
TGA
[ENA]
¢þ
>WENV180136970
OATO01000054
[OATO] human gut metagenome; faeces
33536
33621
+
Ser
TGA
[ENA]
¢þ
>WENV180142591
OATW01002008
[OATW] human gut metagenome; faeces
591
676
+
Ser
TGA
[ENA]
¢þ
>WENV180147135
OAUG01000636
[OAUG] human gut metagenome; faeces
723
638
-
Ser
TGA
[ENA]
¢þ
>WENV180147447
OAUH01000219
[OAUH] human gut metagenome; faeces
18301
18216
-
Ser
TGA
[ENA]
¢þ
>WENV180149151
OAUK01021527
[OAUK] human gut metagenome; faeces
202
287
+
Ser
TGA
[ENA]
¢þ
>WENV180151991
OAUP01002141
[OAUP] human gut metagenome; faeces
916
1001
+
Ser
TGA
[ENA]
¢þ
>WENV180152613
OAUQ01012814
[OAUQ] human gut metagenome; faeces
533
618
+
Ser
TGA
[ENA]
¢þ
>WENV180157519
OAUX01000134
[OAUX] human gut metagenome; faeces
20191
20106
-
Ser
TGA
[ENA]
¢þ
>WENV180163688
OAVI01000164
[OAVI] human gut metagenome; faeces
18170
18085
-
Ser
TGA
[ENA]
¢þ
>WENV180165151
OAVK01000113
[OAVK] human gut metagenome; faeces
30622
30707
+
Ser
TGA
[ENA]
¢þ
>WENV180165769
OAVL01000025
[OAVL] human gut metagenome; faeces
57297
57212
-
Ser
TGA
[ENA]
¢þ
>WENV180169073
OAVS01000724
[OAVS] human gut metagenome; faeces
6118
6203
+
Ser
TGA
[ENA]
¢þ
>WENV180171232
OAVW01000034
[OAVW] human gut metagenome; faeces
20245
20160
-
Ser
TGA
[ENA]
¢þ
>WENV180172196
OAVX01000387
[OAVX] human gut metagenome; faeces
3989
3904
-
Ser
TGA
[ENA]
¢þ
>WENV180172909
OAVY01000109
[OAVY] human gut metagenome; faeces
3185
3100
-
Ser
TGA
[ENA]
¢þ
>WENV180173240
OAVZ01000085
[OAVZ] human gut metagenome; faeces
18485
18570
+
Ser
TGA
[ENA]
¢þ
>WENV180174011
OAWA01002416
[OAWA] human gut metagenome; faeces
738
653
-
Ser
TGA
[ENA]
¢þ
>WENV180176461
OAWD01000129
[OAWD] human gut metagenome; faeces
16198
16113
-
Ser
TGA
[ENA]
¢þ
>WENV180177277
OAWE01000183
[OAWE] human gut metagenome; faeces
6431
6516
+
Ser
TGA
[ENA]
¢þ
>WENV180183949
OAWR01000036
[OAWR] human gut metagenome; faeces
16115
16030
-
Ser
TGA
[ENA]
¢þ
>WENV180185813
OAWU01000195
[OAWU] human gut metagenome; faeces
20060
19975
-
Ser
TGA
[ENA]
¢þ
>WENV180188191
OAWW01009536
[OAWW] human gut metagenome; faeces
679
594
-
Ser
TGA
[ENA]
¢þ
>WENV180191119
OAXB01000729
[OAXB] human gut metagenome; faeces
4203
4288
+
Ser
TGA
[ENA]
¢þ
>WENV180195896
OAZZ01002813
[OAZZ] human gut metagenome; faeces
347
432
+
Ser
TGA
[ENA]
¢þ
>WENV180289612
OBIU01000033
[OBIU] human gut metagenome; human gut
44761
44676
-
Ser
TGA
[ENA]
¢þ
>WENV180409527
OBUU01003062
[OBUU] human gut metagenome; faeces
739
654
-
Ser
TGA
[ENA]
¢þ
>WENV180419384
OBVM01002916
[OBVM] human gut metagenome; faeces
893
978
+
Ser
TGA
[ENA]
¢þ
>WENV180420820
OBVP01000084
[OBVP] human gut metagenome; faeces
30559
30644
+
Ser
TGA
[ENA]
¢þ
>WENV180423948
OBVW01040304
[OBVW] human gut metagenome; faeces
52
137
+
Ser
TGA
[ENA]
¢þ
>WENV180428019
OBWB01002593
[OBWB] human gut metagenome; faeces
1214
1299
+
Ser
TGA
[ENA]
¢þ
>WENV180437236
OBWO01001470
[OBWO] human gut metagenome; faeces
5933
6018
+
Ser
TGA
[ENA]
¢þ
>WENV180438919
OBWS01002244
[OBWS] human gut metagenome; faeces
6611
6526
-
Ser
TGA
[ENA]
¢þ
>WENV180441446
OBWW01000310
[OBWW] human gut metagenome; faeces
24781
24866
+
Ser
TGA
[ENA]
¢þ
>WENV180445758
OBXA01020232
[OBXA] human gut metagenome; faeces
627
542
-
Ser
TGA
[ENA]
¢þ
>WENV180451463
OBXI01012800
[OBXI] human gut metagenome; faeces
625
540
-
Ser
TGA
[ENA]
¢þ
>WENV180459524
OBXX01000389
[OBXX] human gut metagenome; faeces
7999
8084
+
Ser
TGA
[ENA]
¢þ
>WENV180460806
OBXZ01001315
[OBXZ] human gut metagenome; faeces
5568
5483
-
Ser
TGA
[ENA]
¢þ
>WENV180466685
OBYG01004692
[OBYG] human gut metagenome; faeces
3121
3036
-
Ser
TGA
[ENA]
¢þ
>WENV180475059
OBYU01000075
[OBYU] human gut metagenome; faeces
26718
26633
-
Ser
TGA
[ENA]
¢þ
>WENV180486467
OBZM01000173
[OBZM] human gut metagenome; faeces
786
701
-
Ser
TGA
[ENA]
¢þ
>WENV180487576
OBZP01002562
[OBZP] human gut metagenome; faeces
610
695
+
Ser
TGA
[ENA]
¢þ
>WENV180489279
OBZS01000012
[OBZS] human gut metagenome; faeces
40034
39949
-
Ser
TGA
[ENA]
¢þ
>WENV180490673
OBZU01011967
[OBZU] human gut metagenome; faeces
346
431
+
Ser
TGA
[ENA]
¢þ
>WENV180491980
OBZW01000139
[OBZW] human gut metagenome; faeces
20037
19952
-
Ser
TGA
[ENA]
¢þ
>WENV180493444
OBZZ01000010
[OBZZ] human gut metagenome; faeces
40005
39920
-
Ser
TGA
[ENA]
¢þ
>WENV180495194
OCAA01012369
[OCAA] human gut metagenome; faeces
648
733
+
Ser
TGA
[ENA]
¢þ
>WENV180496513
OCAD01003462
[OCAD] human gut metagenome; faeces
2883
2798
-
Ser
TGA
[ENA]
¢þ
>WENV180497939
OCAF01000153
[OCAF] human gut metagenome; faeces
30611
30696
+
Ser
TGA
[ENA]
¢þ
>WENV180498498
OCAG01000285
[OCAG] human gut metagenome; faeces
30618
30703
+
Ser
TGA
[ENA]
¢þ
>WENV180499249
OCAH01000384
[OCAH] human gut metagenome; faeces
15074
15159
+
Ser
TGA
[ENA]
¢þ
>WENV180500409
OCAI01019688
[OCAI] human gut metagenome; faeces
654
569
-
Ser
TGA
[ENA]
¢þ
>WENV180500721
OCAJ01000135
[OCAJ] human gut metagenome; faeces
27464
27549
+
Ser
TGA
[ENA]
¢þ
>WENV180501660
OCAK01003254
[OCAK] human gut metagenome; faeces
3119
3034
-
Ser
TGA
[ENA]
¢þ
>WENV180505064
OCAO01001355
[OCAO] human gut metagenome; faeces
790
875
+
Ser
TGA
[ENA]
¢þ
>WENV180601189
OCPQ01010724
[OCPQ] human gut metagenome; faeces
692
607
-
Ser
TGA
[ENA]
¢þ
>WENV180607129
OCPU01000290
[OCPU] human gut metagenome; human gut
30583
30668
+
Ser
TGA
[ENA]
¢þ
>W141079293
ATLK01000002
Actinomycetota
Bifidobacterium bombi DSM 19703 [ATLK]
184776
184863
+
Ser
TGA
[ENA]
¡û
>W141079294
ATLK01000002
Actinomycetota
Bifidobacterium bombi DSM 19703 [ATLK]
190290
190377
+
Ser
TGA
[ENA]
¡û
>WENV180838713
ODKG01203619
[ODKG] human metagenome; G_DNA_Stool
213
128
-
Ser
TGA
[ENA]
¢þ
>WENV180845078
ODKR01009695
[ODKR] human metagenome; G_DNA_Posterior fornix
109
194
+
Ser
TGA
[ENA]
¢þ
>WENV181187662
OENZ01000070
[OENZ] human gut metagenome; human gut
16175
16090
-
Ser
TGA
[ENA]
¢þ
>WENV181216714
OFCG01000059
[OFCG] metagenome; Human gut stool
50653
50738
+
Ser
TGA
[ENA]
¢þ
>WENV181217681
OFCL01000008
[OFCL] metagenome; Human gut stool
40097
40012
-
Ser
TGA
[ENA]
¢þ
>WENV181218301
OFCM01000130
[OFCM] metagenome; Human gut stool
13416
13501
+
Ser
TGA
[ENA]
¢þ
>WENV181218701
OFCN01000017
[OFCN] metagenome; Human gut stool
146887
146972
+
Ser
TGA
[ENA]
¢þ
>WENV181219499
OFCP01000033
[OFCP] metagenome; Human gut stool
67010
67095
+
Ser
TGA
[ENA]
¢þ
>WENV181221033
OFCU01000029
[OFCU] metagenome; Human gut stool
40054
39969
-
Ser
TGA
[ENA]
¢þ
>WENV181222043
OFDA01000024
[OFDA] metagenome; Human gut stool
146887
146972
+
Ser
TGA
[ENA]
¢þ
>WENV181330861
OFLZ01000116
[OFLZ] human gut metagenome; human gut
59947
60032
+
Ser
TGA
[ENA]
¢þ
>WENV181337278
OFME01001400
[OFME] human gut metagenome; human gut
12987
12902
-
Ser
TGA
[ENA]
¢þ
>WENV181347116
OFMM01000802
[OFMM] human gut metagenome; human gut
3996
3911
-
Ser
TGA
[ENA]
¢þ
>WENV181348248
OFMN01000226
[OFMN] human gut metagenome; human gut
26750
26665
-
Ser
TGA
[ENA]
¢þ
>WENV181366810
OFPS01018818
[OFPS] human gut metagenome; human gut
301
386
+
Ser
TGA
[ENA]
¢þ
>WENV181423703
OGCO01015642
[OGCO] human gut metagenome; human gut
3538
3453
-
Ser
TGA
[ENA]
¢þ
>W141143955
AWSW01000021
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
33536
33621
+
Ser
TGA
[ENA]
¡û
>WENV181523110
OGHF01043563
[OGHF] metagenome; Human gut stool
179
264
+
Ser
TGA
[ENA]
¢þ
>WENV181672157
OGON01023911
[OGON] human gut metagenome; faeces
913
998
+
Ser
TGA
[ENA]
¢þ
>WENV181673681
OGOO01006581
[OGOO] human gut metagenome; faeces
5547
5462
-
Ser
TGA
[ENA]
¢þ
>WENV181690270
OGOY01028454
[OGOY] human gut metagenome; faeces
643
728
+
Ser
TGA
[ENA]
¢þ
>WENV181699450
OGPF01064347
[OGPF] human gut metagenome; faeces
67
152
+
Ser
TGA
[ENA]
¢þ
>WENV181701398
OGPH01001014
[OGPH] human gut metagenome; faeces
118
203
+
Ser
TGA
[ENA]
¢þ
>WENV181705838
OGPK01042401
[OGPK] human gut metagenome; faeces
629
544
-
Ser
TGA
[ENA]
¢þ
>WENV181714708
OGPR01004437
[OGPR] human gut metagenome; faeces
728
643
-
Ser
TGA
[ENA]
¢þ
>WENV181722238
OGPV01035546
[OGPV] human gut metagenome; faeces
533
618
+
Ser
TGA
[ENA]
¢þ
>WENV181722872
OGPW01000506
[OGPW] human gut metagenome; faeces
16230
16145
-
Ser
TGA
[ENA]
¢þ
>WENV181727264
OGPZ01057919
[OGPZ] human gut metagenome; faeces
80
165
+
Ser
TGA
[ENA]
¢þ
>W08010155
ABQP01000021
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
237853
237938
+
Ser
TGA
[ENA]
¡û
>WENV181755834
OGQS01025485
[OGQS] human gut metagenome; faeces
672
587
-
Ser
TGA
[ENA]
¢þ
>WENV181757748
OGQT01076166
[OGQT] human gut metagenome; faeces
644
559
-
Ser
TGA
[ENA]
¢þ
>WENV181764425
OGQX01097982
[OGQX] human gut metagenome; faeces
402
317
-
Ser
TGA
[ENA]
¢þ
>WENV181769646
OGRA01064729
[OGRA] human gut metagenome; faeces
404
489
+
Ser
TGA
[ENA]
¢þ
>WENV181770722
OGRB01022759
[OGRB] human gut metagenome; faeces
681
596
-
Ser
TGA
[ENA]
¢þ
>WENV181781215
OGRJ01020063
[OGRJ] human gut metagenome; faeces
1266
1181
-
Ser
TGA
[ENA]
¢þ
>WENV181785989
OGRN01000459
[OGRN] human gut metagenome; faeces
24822
24737
-
Ser
TGA
[ENA]
¢þ
>WENV181793752
OGRR01011377
[OGRR] human gut metagenome; faeces
1960
2045
+
Ser
TGA
[ENA]
¢þ
>WENV181797679
OGRU01009471
[OGRU] human gut metagenome; faeces
703
618
-
Ser
TGA
[ENA]
¢þ
>WENV181829775
OGUN01062082
[OGUN] human gut metagenome; faeces
578
493
-
Ser
TGA
[ENA]
¢þ
>WENV181898822
OGXT01017034
[OGXT] human gut metagenome; faeces
1524
1609
+
Ser
TGA
[ENA]
¢þ
>WENV181913642
OGYE01016188
[OGYE] human gut metagenome; faeces
1240
1155
-
Ser
TGA
[ENA]
¢þ
>WENV181937653
OGYW01000363
[OGYW] human gut metagenome; faeces
9158
9073
-
Ser
TGA
[ENA]
¢þ
>WENV181940390
OGYX01055407
[OGYX] human gut metagenome; faeces
562
477
-
Ser
TGA
[ENA]
¢þ
>WENV181945586
OGZB01019704
[OGZB] human gut metagenome; faeces
873
958
+
Ser
TGA
[ENA]
¢þ
>WENV182180041
OHNN01024568
[OHNN] human gut metagenome; feces
340
255
-
Ser
TGA
[ENA]
¢þ
>WENV182394602
OIEJ01000087
[OIEJ] human gut metagenome; human gut
25047
24962
-
Ser
TGA
[ENA]
¢þ
>WENV182400368
OIEQ01000078
[OIEQ] human gut metagenome; human gut
39551
39466
-
Ser
TGA
[ENA]
¢þ
>WENV182401412
OIER01001696
[OIER] human gut metagenome; human gut
8712
8627
-
Ser
TGA
[ENA]
¢þ
>WENV182403578
OIEU01000009
[OIEU] human gut metagenome; human gut
40265
40180
-
Ser
TGA
[ENA]
¢þ
>WENV182471762
OIPM01005656
[OIPM] human gut metagenome; human gut
329
244
-
Ser
TGA
[ENA]
¢þ
>WENV182778102
OJSC01022371
[OJSC] human gut metagenome; human gut
1141
1056
-
Ser
TGA
[ENA]
¢þ
>WENV182779334
OJSD01002648
[OJSD] human gut metagenome; human gut
16336
16251
-
Ser
TGA
[ENA]
¢þ
>WENV182796437
OJSQ01021184
[OJSQ] human gut metagenome; human gut
1633
1718
+
Ser
TGA
[ENA]
¢þ
>WENV182802103
OJUG01004844
[OJUG] human gut metagenome; human gut
2543
2458
-
Ser
TGA
[ENA]
¢þ
>WENV182805363
OJVE01000094
[OJVE] human gut metagenome; human gut
39970
39885
-
Ser
TGA
[ENA]
¢þ
>WENV182827250
OKCX01001630
[OKCX] human gut metagenome; human gut
64
149
+
Ser
TGA
[ENA]
¢þ
>WENV182872443
OKRV01006223
[OKRV] human gut metagenome; faeces
336
421
+
Ser
TGA
[ENA]
¢þ
>WENV182875786
OKRX01004819
[OKRX] human gut metagenome; faeces
6086
6171
+
Ser
TGA
[ENA]
¢þ
>WENV182941991
OKVG01020283
[OKVG] human gut metagenome; human gut
840
755
-
Ser
TGA
[ENA]
¢þ
>WENV182942023
OKVG01023091
[OKVG] human gut metagenome; human gut
115
30
-
Ser
TGA
[ENA]
¢þ
>WENV182947229
OKVL01004513
[OKVL] human gut metagenome; human gut
345
430
+
Ser
TGA
[ENA]
¢þ
>WENV182950775
OKVT01000025
[OKVT] human gut metagenome; human gut
25096
25011
-
Ser
TGA
[ENA]
¢þ
>WENV182954042
OKWA01000001
[OKWA] human gut metagenome; human gut
365928
366013
+
Ser
TGA
[ENA]
¢þ
>WENV182982208
OKZA01004044
[OKZA] human gut metagenome; human gut
436
351
-
Ser
TGA
[ENA]
¢þ
>WENV183080848
OLIY01017755
[OLIY] human gut metagenome; human gut
1172
1257
+
Ser
TGA
[ENA]
¢þ
>WENV183083068
OLJB01015677
[OLJB] human gut metagenome; human gut
1308
1223
-
Ser
TGA
[ENA]
¢þ
>WENV183090007
OLJW01038258
[OLJW] human gut metagenome; human gut
305
390
+
Ser
TGA
[ENA]
¢þ
>WENV183096628
OLNE01000090
[OLNE] human gut metagenome; faeces
40028
39943
-
Ser
TGA
[ENA]
¢þ
>WENV183115574
OLNQ01011879
[OLNQ] human gut metagenome; faeces
3826
3741
-
Ser
TGA
[ENA]
¢þ
>WENV183119467
OLNT01014354
[OLNT] human gut metagenome; faeces
695
610
-
Ser
TGA
[ENA]
¢þ
>WENV183126310
OLNY01009066
[OLNY] human gut metagenome; faeces
3816
3731
-
Ser
TGA
[ENA]
¢þ
>WENV183133791
OLOC01000765
[OLOC] human gut metagenome; faeces
15935
15850
-
Ser
TGA
[ENA]
¢þ
>WENV183167399
OLOZ01000169
[OLOZ] human gut metagenome; faeces
32651
32736
+
Ser
TGA
[ENA]
¢þ
>WENV183182278
OLPK01000116
[OLPK] human gut metagenome; faeces
40134
40049
-
Ser
TGA
[ENA]
¢þ
>WENV183189159
OLPQ01000688
[OLPQ] human gut metagenome; faeces
13668
13583
-
Ser
TGA
[ENA]
¢þ
>WENV183215301
OLQG01000774
[OLQG] human gut metagenome; faeces
23362
23277
-
Ser
TGA
[ENA]
¢þ
>WENV183217398
OLQI01000259
[OLQI] human gut metagenome; faeces
14822
14907
+
Ser
TGA
[ENA]
¢þ
>WENV183227496
OLQQ01000030
[OLQQ] human gut metagenome; faeces
40008
39923
-
Ser
TGA
[ENA]
¢þ
>WENV183244913
OLRE01000666
[OLRE] human gut metagenome; faeces
25299
25214
-
Ser
TGA
[ENA]
¢þ
>WENV183264992
OLRS01001347
[OLRS] human gut metagenome; faeces
23488
23403
-
Ser
TGA
[ENA]
¢þ
>WENV183266046
OLRT01000355
[OLRT] human gut metagenome; faeces
25299
25214
-
Ser
TGA
[ENA]
¢þ
>WENV183270125
OLRV01003583
[OLRV] human gut metagenome; faeces
621
706
+
Ser
TGA
[ENA]
¢þ
>WENV183297352
OLSM01002409
[OLSM] human gut metagenome; faeces
11416
11501
+
Ser
TGA
[ENA]
¢þ
>WENV183307389
OLTF01002813
[OLTF] human gut metagenome; faeces
180
95
-
Ser
TGA
[ENA]
¢þ
>WENV183329448
OLWB01000339
[OLWB] human gut metagenome; faeces
24773
24858
+
Ser
TGA
[ENA]
¢þ
>WENV183501506
OMGS01000415
[OMGS] human gut metagenome; human gut
25279
25194
-
Ser
TGA
[ENA]
¢þ
>WENV183522503
ONZR01000115
[ONZR] human gut metagenome; human gut
31466
31551
+
Ser
TGA
[ENA]
¢þ
>WENV183527493
ONZW01000672
[ONZW] human gut metagenome; human gut
16170
16085
-
Ser
TGA
[ENA]
¢þ
>WENV183560016
OOBT01003424
[OOBT] human gut metagenome; human gut
5972
6057
+
Ser
TGA
[ENA]
¢þ
>WENV183561032
OOBU01008609
[OOBU] human gut metagenome; human gut
620
535
-
Ser
TGA
[ENA]
¢þ
>WENV183567315
OOCB01000377
[OOCB] human gut metagenome; human gut
39960
39875
-
Ser
TGA
[ENA]
¢þ
>WENV183575613
OOCI01003976
[OOCI] human gut metagenome; human gut
2697
2782
+
Ser
TGA
[ENA]
¢þ
>WENV183580968
OOCN01001295
[OOCN] human gut metagenome; human gut
938
1023
+
Ser
TGA
[ENA]
¢þ
>WENV183590270
OOCX01000137
[OOCX] human gut metagenome; human gut
54947
54862
-
Ser
TGA
[ENA]
¢þ
>WENV183601540
OODJ01001793
[OODJ] human gut metagenome; human gut
6762
6847
+
Ser
TGA
[ENA]
¢þ
>WENV183655452
OQWD01020824
[OQWD] human gut metagenome; human gut
719
634
-
Ser
TGA
[ENA]
¢þ
>WENV183751488
PPYE01015910
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
1272
1187
-
Ser
TGA
[ENA]
¢þ
>C181071732
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
652320
652405
+
Ser
TGA
-
¡û
>C191000955
AP018131
Actinomycetota
Bifidobacterium bifidum LMG 13195 JCM 7004 [AP018131]
486620
486535
-
Ser
TGA
-
¡û
>C191000995
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
948026
947941
-
Ser
TGA
-
¡û
>W141523764
JGYO01000001
Actinomycetota
Bifidobacterium bifidum [JGYO]
196920
196835
-
Ser
TGA
[ENA]
¡û
>C191207976
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
892691
892776
+
Ser
TGA
-
¡û
>W1910829250
MWWY01000013
Actinomycetota
Bifidobacterium hapali DSM 100202 [MWWY]
89437
89522
+
Ser
TGA
[ENA]
¡û
>W1810541456
QDIH01000068
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
25275
25360
+
Ser
TGA
[ENA]
¡û
>W1810541473
QDII01000006
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
13282
13367
+
Ser
TGA
[ENA]
¡û
>W1810541696
QDIM01000069
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
25213
25298
+
Ser
TGA
[ENA]
¡û
>W1810542369
QDJA01000014
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
25280
25195
-
Ser
TGA
[ENA]
¡û
>W1810792874
QRJI01000001
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
380207
380292
+
Ser
TGA
[ENA]
¡û
>W1810793081
QRJM01000001
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
380496
380581
+
Ser
TGA
[ENA]
¡û
>W1810793231
QRJP01000001
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
380247
380332
+
Ser
TGA
[ENA]
¡û
>W1810795943
QRLK01000003
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
157586
157671
+
Ser
TGA
[ENA]
¡û
>W1810796334
QRLR01000002
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
190033
189948
-
Ser
TGA
[ENA]
¡û
>W1810798796
QRNM01000010
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
33815
33900
+
Ser
TGA
[ENA]
¡û
>W1810824920
QSHW01000002
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
407238
407323
+
Ser
TGA
[ENA]
¡û
>W1810832030
QSOS01000002
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
367443
367528
+
Ser
TGA
[ENA]
¡û
>W1810832422
QSPA01000002
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
110287
110202
-
Ser
TGA
[ENA]
¡û
>W1810834065
QSQF01000001
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
161177
161092
-
Ser
TGA
[ENA]
¡û
>W1810836187
QSRS01000002
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
312486
312571
+
Ser
TGA
[ENA]
¡û
>W1810836884
QSSD01000001
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
380449
380534
+
Ser
TGA
[ENA]
¡û
>W1810837728
QSSS01000006
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
184260
184175
-
Ser
TGA
[ENA]
¡û
>C151000523
AP012331
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [AP012331]
684911
684996
+
Ser
TGA
[Ensembl]
¡û
>C151068329
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
1842675
1842590
-
Ser
TGA
-
¡û
>C11102307
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
1776520
1776435
-
Ser
TGA
[Ensembl]
¡û
>W1511364971
JSDS01000003
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
46251
46166
-
Ser
TGA
[ENA]
¡û
>W1511365013
JSDT01000001
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
368723
368808
+
Ser
TGA
[ENA]
¡û
>W1511365117
JSDV01000001
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
180325
180240
-
Ser
TGA
[ENA]
¡û
>W1511365163
JSDW01000002
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
98366
98281
-
Ser
TGA
[ENA]
¡û
>W1511365208
JSDX01000003
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
107898
107813
-
Ser
TGA
[ENA]
¡û
>W1511365260
JSDY01000001
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
362855
362770
-
Ser
TGA
[ENA]
¡û
>W1511365356
JSEA01000004
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
33107
33022
-
Ser
TGA
[ENA]
¡û
>W1511437588
JULC01000112
Actinomycetota
Bifidobacterium scardovii 981_BLON [JULC]
12494
12409
-
Ser
TGA
[ENA]
¡û
>W1511592025
LBIB01000001
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [LBIB]
36583
36498
-
Ser
TGA
[ENA]
¡û
>W1610045702
BBBT01000077
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
6101
6186
+
Ser
TGA
[ENA]
¡û
>W1610098200
CYXQ01000003
Actinomycetota
Bifidobacterium bifidum [CYXQ]
174072
174157
+
Ser
TGA
[ENA]
¡û
>W1610516163
FMBL01000002
Actinomycetota
Bifidobacterium commune [FMBL]
9783
9698
-
Ser
TGA
[ENA]
¡û
>W1610518608
JDTN01000001
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [JDTN]
3284
3199
-
Ser
TGA
[ENA]
¡û
>W1610519775
JDUM01000006
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [JDUM]
35896
35811
-
Ser
TGA
[ENA]
¡û
>W1610921347
LSUI01000034
Actinomycetota
Bifidobacterium bifidum [LSUI]
25299
25214
-
Ser
TGA
[ENA]
¡û
>W1610921444
LSUL01000009
Actinomycetota
Bifidobacterium bifidum [LSUL]
24971
24886
-
Ser
TGA
[ENA]
¡û
>W1710042543
BBBT01000077
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
6101
6186
+
Ser
TGA
[ENA]
¡û
>W1710100955
CYXQ01000003
Actinomycetota
Bifidobacterium bifidum [CYXQ]
174072
174157
+
Ser
TGA
[ENA]
¡û
>W1710501454
FMBL01000002
Actinomycetota
Bifidobacterium commune [FMBL]
9783
9698
-
Ser
TGA
[ENA]
¡û
>W1710558360
FOLU01000002
Actinomycetota
Bifidobacterium bifidum [FOLU]
118249
118334
+
Ser
TGA
[ENA]
¡û
>W1710614128
JDTN01000001
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [JDTN]
3284
3199
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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