tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.530047 (72 seq.)
>W1711229430 LXYK01000044 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 95280 95353 + Gly TCC [ENA] ¡û
>w012012 AALZ01000008 Alphaproteobacteria Sulfitobacter sp. NAS-14.1 [AALZ] 111007 111080 + Gly TCC [ENA] ¡û
>w011803 AALV01000005 Alphaproteobacteria Sulfitobacter sp. EE-36 [AALV] 226707 226780 + Gly TCC [ENA] ¡û
>WENV180052437 MPLU02298802 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 14644 14571 - Gly TCC [ENA] ¡û
>WENV180055555 MPLV02168238 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 867 794 - Gly TCC [ENA] ¡û
>W141171297 AXZR01000001 Alphaproteobacteria Sulfitobacter pontiacus 3SOLIMAR09 [AXZR] 468900 468827 - Gly TCC [ENA] ¡û
>WENV182541789 OJAU01002014 [OJAU] seawater metagenome; Sea water 7 80 + Gly TCC [ENA] ¡û
>WENV182543024 OJAZ01017347 [OJAZ] seawater metagenome; Sea water 733 660 - Gly TCC [ENA] ¡û
>WENV182544071 OJBE01000174 [OJBE] seawater metagenome; Sea water 2734 2807 + Gly TCC [ENA] ¡û
>WENV182544851 OJBK01000523 [OJBK] seawater metagenome; Sea water 2417 2344 - Gly TCC [ENA] ¡û
>WENV182546793 OJBP01003506 [OJBP] seawater metagenome; Sea water 855 782 - Gly TCC [ENA] ¡û
>WENV182547144 OJBR01002310 [OJBR] seawater metagenome; Sea water 2716 2789 + Gly TCC [ENA] ¡û
>WENV182547976 OJBU01006477 [OJBU] seawater metagenome; Sea water 1054 981 - Gly TCC [ENA] ¡û
>WENV182549602 OJBY01003161 [OJBY] seawater metagenome; Sea water 2128 2055 - Gly TCC [ENA] ¡û
>WENV182549923 OJBZ01000460 [OJBZ] seawater metagenome; Sea water 9199 9126 - Gly TCC [ENA] ¡û
>WENV182555487 OJDA01005188 [OJDA] seawater metagenome; Sea water 865 792 - Gly TCC [ENA] ¡û
>WENV182555775 OJDD01000626 [OJDD] seawater metagenome; Sea water 8267 8340 + Gly TCC [ENA] ¡û
>WENV182557667 OJDK01001561 [OJDK] seawater metagenome; Sea water 2608 2535 - Gly TCC [ENA] ¡û
>WENV182562624 OJDZ01027068 [OJDZ] seawater metagenome; Sea water 368 441 + Gly TCC [ENA] ¡û
>WENV182566992 OJEN01000303 [OJEN] seawater metagenome; Sea water 14639 14566 - Gly TCC [ENA] ¡û
>WENV182583728 OJHE01000700 [OJHE] seawater metagenome; Sea water 1738 1665 - Gly TCC [ENA] ¡û
>WENV182586030 OJHJ01000336 [OJHJ] seawater metagenome; Sea water 13412 13485 + Gly TCC [ENA] ¡û
>WENV182588150 OJHO01008814 [OJHO] seawater metagenome; Sea water 1188 1261 + Gly TCC [ENA] ¡û
>WENV183055364 OLGX01008656 [OLGX] seawater metagenome; Sea water 335 262 - Gly TCC [ENA] ¡û
>WENV183057229 OLHK01021089 [OLHK] seawater metagenome; Sea water 81 154 + Gly TCC [ENA] ¡û
>WENV183057590 OLHL01014309 [OLHL] seawater metagenome; Sea water 581 654 + Gly TCC [ENA] ¡û
>WENV183748904 PPFU01095580 [PPFU] hypolithon metagenome; Antarctic Hypolithon 743 816 + Gly TCC [ENA] ¡û
>WENV183807183 PVBE011177997 [PVBE] marine metagenome; water 43856 43783 - Gly TCC [ENA] ¡û
>WENV170015426 AZIG01006464 [AZIG] marine sediment metagenome; enrichment culture of sample MGS-AQ(UA) from oil contaminated terminal site at a crude oil 534 461 - Gly TCC [ENA] ¡û
>WENV170120200 CENJ01218808 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 67 140 + Gly TCC [ENA] ¡û
>WENV170228372 CEQG01006050 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1560 1487 - Gly TCC [ENA] ¡û
>WENV170234228 CEQK01024690 [CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 399 326 - Gly TCC [ENA] ¡û
>WENV170257357 CEQX01270803 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 11 - Gly TCC [ENA] ¡û
>WENV170260299 CEQZ01008586 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 274 + Gly TCC [ENA] ¡û
>WENV170265527 CERD01208545 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 244 317 + Gly TCC [ENA] ¡û
>WENV170265951 CERE01026191 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6130 6057 - Gly TCC [ENA] ¡û
>WENV170276310 CERN01021505 [CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 250 177 - Gly TCC [ENA] ¡û
>WENV170276948 CERO01081472 [CERO] marine metagenome genome assembly TARA_068_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 320 393 + Gly TCC [ENA] ¡û
>WENV170307972 CESK01039758 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1309 1382 + Gly TCC [ENA] ¡û
>WENV170672358 LAZR01000077 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 37949 37876 - Gly TCC [ENA] ¡û
>WENV170672835 LAZR01002599 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 8036 7963 - Gly TCC [ENA] ¡û
>WENV170710893 LNFM01002966 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 914 841 - Gly TCC [ENA] ¡û
>WENV170715031 LNFM01126919 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 331 404 + Gly TCC [ENA] ¡û
>WENV170759287 LUMS01009968 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 875 802 - Gly TCC [ENA] ¡û
>WENV170762213 LUMW01002297 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 1046 973 - Gly TCC [ENA] ¡û
>WENV170782985 MAAC01012567 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 3399 3326 - Gly TCC [ENA] ¡û
>C181123380 CP025808 Alphaproteobacteria Sulfitobacter sp. SK025 [CP025808] 1352243 1352316 + Gly TCC - ¡û
>C191182618 CP040753 Alphaproteobacteria Sulfitobacter sp. BSw21498 [CP040753] 1632541 1632468 - Gly TCC - ¡û
>W141807892 JPOY01000011 Alphaproteobacteria Sulfitobacter sp. CB2047 [JPOY] 802082 802155 + Gly TCC [ENA] ¡û
>W1910500573 FXZK01000007 Alphaproteobacteria Flavimaricola marinus CECT 8899 [FXZK] 182018 181945 - Gly TCC [ENA] ¡û
>W1910814097 MVIP01000001 Alphaproteobacteria Sulfitobacter pontiacus SAORIC-395 [MVIP] 851651 851578 - Gly TCC [ENA] ¡û
>W1810424131 PYUG01000007 Alphaproteobacteria Sulfitobacter sp. CB-A [PYUG] 802082 802155 + Gly TCC [ENA] ¡û
>W2010420305 FXZK01000007 Alphaproteobacteria Flavimaricola marinus CECT 8899 [FXZK] 182018 181945 - Gly TCC [ENA] ¡û
>W2010582850 JAAZTC010000037 Alphaproteobacteria Rhodobacteraceae bacterium R_SAG8 [JAAZTC] 9811 9738 - Gly TCC [ENA] ¡û
>W2010727295 JACIFR010000001 Alphaproteobacteria Sulfitobacter sp. N5S [JACIFR] 1672978 1672905 - Gly TCC [ENA] ¡û
>W2010917726 MVIP01000001 Alphaproteobacteria Sulfitobacter pontiacus SAORIC-395 [MVIP] 851651 851578 - Gly TCC [ENA] ¡û
>W2011694727 STGH01000002 Alphaproteobacteria Rhodobacter sp. SY28-1 [STGH] 323646 323573 - Gly TCC [ENA] ¡û
>SRA1052671 SRR035098.250396 454 Sequencing (SRP001819) 279 352 + Gly TCC [SRA]
>C211206632 CP065429 Alphaproteobacteria Sulfitobacter sp. B30-2 [CP065429] 1246967 1247040 + Gly TCC - ¡û
>C231127696 CP072613 Alphaproteobacteria Sulfitobacter sp. CB2047 [CP072613] 2462114 2462041 - Gly TCC - ¡û
>C231169552 CP081116 Alphaproteobacteria Sulfitobacter pontiacus W028 [CP081116] 1261264 1261337 + Gly TCC - ¡û
>C231201448 CP084959 Alphaproteobacteria Sulfitobacter pontiacus DSM 110277 [CP084959] 1234424 1234497 + Gly TCC - ¡û
>C241011767 AP027373 Alphaproteobacteria Sulfitobacter pontiacus BL28 [AP027373] 1268320 1268393 + Gly TCC - ¡û
>C241135958 CP049344 Alphaproteobacteria Sulfitobacter pontiacus S1704 [CP049344] 1325868 1325941 + Gly TCC - ¡û
>W2310023597 BSKR01000001 Alphaproteobacteria Sulfitobacter pontiacus 191114_B17 [BSKR] 1221066 1221139 + Gly TCC [ENA] ¡û
>W1511640260 LDPY01000001 Alphaproteobacteria Puniceibacterium sp. IMCC21224 [LDPY] 2217454 2217381 - Gly TCC [ENA] ¡û
>W1511698434 LGHU01000014 Alphaproteobacteria Pseudorhodobacter antarcticus KCTC 23700 [LGHU] 36979 37052 + Gly TCC [ENA] ¡û
>W1611013300 LXYK01000044 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 95280 95353 + Gly TCC [ENA] ¡û
>W1710524971 FNJD01000017 Alphaproteobacteria Sulfitobacter litoralis [FNJD] 32095 32168 + Gly TCC [ENA] ¡û
>W1710528258 FNNB01000003 Alphaproteobacteria Sulfitobacter pontiacus [FNNB] 299726 299799 + Gly TCC [ENA] ¡û
>W1710546969 FOCO01000025 Alphaproteobacteria Pseudorhodobacter antarcticus [FOCO] 38090 38163 + Gly TCC [ENA] ¡û
>W1710594768 FSRL01000001 Alphaproteobacteria Vannielia litorea litoreus [FSRL] 2577358 2577431 + Gly TCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK