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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.5399 (167 seq.)
>W1710785711
LJIC01000041
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
826
733
-
Ser
GCT
[ENA]
¡û
>W1710891430
LNCU01000115
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
102956
102863
-
Ser
GCT
[ENA]
¡û
>W1711129941
LUUM01000090
Alphaproteobacteria
Methylosinus sp. R-45379 [LUUM]
6964
6871
-
Ser
GCT
[ENA]
¡û
>W1711228838
LXWX01000035
Alphaproteobacteria
Methylosinus sp. 3S-1 [LXWX]
135886
135793
-
Ser
GCT
[ENA]
¡û
>W1711505823
MKVW01000003
Alphaproteobacteria
Rhizobiales bacterium 62-17 [MKVW]
150386
150293
-
Ser
GCT
[ENA]
¡û
>W1711783537
MVOD01000020
Alphaproteobacteria
Rhodopseudomonas palustris [MVOD]
632793
632886
+
Ser
GCT
[ENA]
¡û
>W131163825
ARAB01000008
Alphaproteobacteria
Methylosinus sp. LW4 [ARAB]
974657
974750
+
Ser
GCT
[ENA]
¡û
>W131186325
ARWA01000001
Alphaproteobacteria
Methyloferula stellata AR4 [ARWA]
2087958
2087865
-
Ser
GCT
[ENA]
¡û
>W131218802
ATYA01000002
Alphaproteobacteria
Methylocapsa acidiphila B2 [ATYA]
518302
518209
-
Ser
GCT
[ENA]
¡û
>W131228549
AUGA01000017
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
71317
71224
-
Ser
GCT
[ENA]
¡û
>C004050
CP000494
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [CP000494]
4931548
4931641
+
Ser
GCT
[Ensembl]
¡û
>C004110
CU234118
Alphaproteobacteria
Bradyrhizobium sp. ORS 278 ORS278 [CU234118]
4682932
4682839
-
Ser
GCT
[Ensembl]
¡û
>C018963
CP000283
Alphaproteobacteria
Rhodopseudomonas palustris BisB5 [CP000283]
2689902
2689809
-
Ser
GCT
[Ensembl]
¡û
>C019015
BX571963
Alphaproteobacteria
Rhodopseudomonas palustris [BX571963]
2744972
2744879
-
Ser
GCT
[Ensembl]
¡û
>C019046
CP000250
Alphaproteobacteria
Rhodopseudomonas palustris HaA2 [CP000250]
3462484
3462577
+
Ser
GCT
[Ensembl]
¡û
>WENV180292748
OBIV01604476
[OBIV] soil metagenome; Clay
145
52
-
Ser
GCT
[ENA]
¡û
>WENV180352952
OBLQ010458441
[OBLQ] soil metagenome; soil
148
55
-
Ser
GCT
[ENA]
¡û
>w001308
AAAF01000014
Alphaproteobacteria
Rhodopseudomonas palustris [AAAF]
775184
775279
+
Ser
GCT
[ENA]
¡û
>WENV180692975
OCZS010898404
[OCZS] soil metagenome; soil
94
187
+
Ser
GCT
[ENA]
¡û
>WENV181145608
OEHO01359089
[OEHO] metagenome; unknown
97
190
+
Ser
GCT
[ENA]
¡û
>WENV181166943
OEIU01004649
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
2760
2853
+
Ser
GCT
[ENA]
¡û
>W141149777
AWZU01000053
Alphaproteobacteria
Bradyrhizobium sp. ARR65 [AWZU]
50411
50318
-
Ser
GCT
[ENA]
¡û
>W141150258
AXAG01000003
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
507918
508011
+
Ser
GCT
[ENA]
¡û
>W141150358
AXAI01000004
Alphaproteobacteria
Bradyrhizobium sp. Tv2a-2 [AXAI]
358364
358457
+
Ser
GCT
[ENA]
¡û
>W141169203
AXVP01000053
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
35666
35573
-
Ser
GCT
[ENA]
¡û
>W141194133
AYSU01000008
Alphaproteobacteria
Rhodopseudomonas palustris JSC-3b [AYSU]
28440
28533
+
Ser
GCT
[ENA]
¡û
>W141214003
AZSJ01000007
Alphaproteobacteria
Afipia sp. P52-10 [AZSJ]
906155
906062
-
Ser
GCT
[ENA]
¡û
>W141216049
AZUO01000001
Alphaproteobacteria
Methylosinus sp. LW3 [AZUO]
1820130
1820037
-
Ser
GCT
[ENA]
¡û
>W141223336
BADD01000767
Alphaproteobacteria
Rhodopseudomonas sp. B29 [BADD]
4124
4031
-
Ser
GCT
[ENA]
¡û
>WENV182406753
OIFA01001539
[OIFA] human gut metagenome; stool
274
367
+
Ser
GCT
[ENA]
¡û
>WENV182409058
OIFG01000911
[OIFG] human gut metagenome; stool
642
735
+
Ser
GCT
[ENA]
¡û
>WENV182412642
OIFV01000460
[OIFV] human gut metagenome; stool
884
977
+
Ser
GCT
[ENA]
¡û
>W141240067
CAFK01000011
Alphaproteobacteria
Bradyrhizobium sp. STM 3843 [CAFK]
180
87
-
Ser
GCT
[ENA]
¡û
>W141278112
JAFC01000019
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
98736
98829
+
Ser
GCT
[ENA]
¡û
>WENV182954968
OKWB01000547
[OKWB] human gut metagenome; stool
560
653
+
Ser
GCT
[ENA]
¡û
>C08001586
CP001016
Alphaproteobacteria
Beijerinckia indica subsp. indica ATCC 9039 [CP001016]
2137115
2137208
+
Ser
GCT
[Ensembl]
¡û
>WENV182962989
OKWP01000063
[OKWP] human gut metagenome; stool
88848
88941
+
Ser
GCT
[ENA]
¡û
>WENV182966368
OKWV01002030
[OKWV] human gut metagenome; stool
1005
912
-
Ser
GCT
[ENA]
¡û
>WENV170002373
AGTN01011325
[AGTN] bioreactor metagenome; poplar biomass
103
10
-
Ser
GCT
[ENA]
¡û
>WENV170648804
JRHI01002441
[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
11209
11302
+
Ser
GCT
[ENA]
¡û
>C181041880
CP019966
Alphaproteobacteria
Rhodopseudomonas palustris PS3 [CP019966]
2668008
2667915
-
Ser
GCT
-
¡û
>C181041928
CP019967
Alphaproteobacteria
Rhodopseudomonas palustris YSC3 [CP019967]
2674076
2673983
-
Ser
GCT
-
¡û
>C181089615
CP023737
Alphaproteobacteria
Methylosinus trichosporium OB3b [CP023737]
537247
537340
+
Ser
GCT
-
¡û
>C191029935
CP025086
Alphaproteobacteria
Methylovirgula ligni BW863 [CP025086]
2101568
2101475
-
Ser
GCT
-
¡û
>W09103847
AAKZ01000018
Alphaproteobacteria
Rhodopseudomonas palustris BisB5 [AAKZ]
21920
21827
-
Ser
GCT
[ENA]
¡û
>W09104111
AALJ01000003
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [AALJ]
544265
544358
+
Ser
GCT
[ENA]
¡û
>W09104380
AALQ01000003
Alphaproteobacteria
Rhodopseudomonas palustris HaA2 [AALQ]
86086
85993
-
Ser
GCT
[ENA]
¡û
>W09107585
ABJR01000001
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [ABJR]
910118
910025
-
Ser
GCT
[ENA]
¡û
>C191221059
LR590083
Alphaproteobacteria
Beijerinckiaceae bacterium RH AL1 [LR590083]
1186259
1186352
+
Ser
GCT
-
¡û
>W141701421
JMKQ01000006
Alphaproteobacteria
Methylocystis sp. LW5 [JMKQ]
137225
137132
-
Ser
GCT
[ENA]
¡û
>W141815719
JQJH01000014
Alphaproteobacteria
Beijerinckia mobilis [JQJH]
742
649
-
Ser
GCT
[ENA]
¡û
>W141817281
JQKO01000008
Alphaproteobacteria
Methylocapsa aurea [JQKO]
153612
153519
-
Ser
GCT
[ENA]
¡û
>W141821199
JQNK01000002
Alphaproteobacteria
Methylosinus sp. PW1 [JQNK]
158151
158058
-
Ser
GCT
[ENA]
¡û
>W1910568887
JHAA01000002
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
359963
359870
-
Ser
GCT
[ENA]
¡û
>W1910914008
NHSJ01000074
Alphaproteobacteria
Rhodoblastus sphagnicola DSM 16996 [NHSJ]
39337
39244
-
Ser
GCT
[ENA]
¡û
>W1911148313
NPET01000007
Alphaproteobacteria
Rhodoblastus acidophilus DSM 137 [NPET]
36196
36289
+
Ser
GCT
[ENA]
¡û
>W1911219114
NRRJ01000017
Alphaproteobacteria
Rhodoblastus acidophilus DSM 137 [NRRJ]
36353
36446
+
Ser
GCT
[ENA]
¡û
>W1911219159
NRSI01000013
Alphaproteobacteria
Rhodopseudomonas palustris DSM 126 [NRSI]
70981
71074
+
Ser
GCT
[ENA]
¡û
>W1911629568
PSRS01000154
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
4434
4341
-
Ser
GCT
[ENA]
¡û
>W1911653508
QDFX01000003
Alphaproteobacteria
Rhizobiaceae bacterium CPCC 101076 [QDFX]
12050
11957
-
Ser
GCT
[ENA]
¡û
>W1911760592
QWVU01000093
Alphaproteobacteria
Rhodopseudomonas palustris R1 [QWVU]
1100
1193
+
Ser
GCT
[ENA]
¡û
>W1911809196
QYYC01000050
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.37 [QYYC]
529343
529250
-
Ser
GCT
[ENA]
¡û
>W1911809209
QYYD01000005
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.18 [QYYD]
97005
97098
+
Ser
GCT
[ENA]
¡û
>W1810089293
PGEQ01000001
Alphaproteobacteria
Bradyrhizobium lablabi GAS165 [PGEQ]
2549884
2549791
-
Ser
GCT
[ENA]
¡û
>W1810330566
PUIV01000014
Alphaproteobacteria
Methylosinus sporium DSM 17706 [PUIV]
74781
74688
-
Ser
GCT
[ENA]
¡û
>W1810368611
PVZS01000037
Alphaproteobacteria
Alsobacter soli SH9 [PVZS]
20969
21062
+
Ser
GCT
[ENA]
¡û
>W1810658599
QJJK01000007
Alphaproteobacteria
Chelatococcus asaccharovorans DSM 6462 [QJJK]
137252
137159
-
Ser
GCT
[ENA]
¡û
>W1810672307
QJTI01000006
Alphaproteobacteria
Rhodopseudomonas faecalis JCM 11668 [QJTI]
147866
147773
-
Ser
GCT
[ENA]
¡û
>W1810679432
QKQS01000016
Alphaproteobacteria
Rhodopseudomonas palustris XCP [QKQS]
198565
198472
-
Ser
GCT
[ENA]
¡û
>W1810720665
QNRK01000010
Alphaproteobacteria
Roseiarcus fermentans DSM 24875 [QNRK]
115062
114969
-
Ser
GCT
[ENA]
¡û
>W1810787525
QRDT01000030
Alphaproteobacteria
Rhodopseudomonas pentothenatexigens JA575 [QRDT]
49949
49856
-
Ser
GCT
[ENA]
¡û
>W1810884368
QUMO01000003
Alphaproteobacteria
Methylovirgula ligni BW863 [QUMO]
499411
499504
+
Ser
GCT
[ENA]
¡û
>W1810884422
QUMP01000030
Alphaproteobacteria
Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP]
49949
49856
-
Ser
GCT
[ENA]
¡û
>W2010080216
BGJX01000004
Alphaproteobacteria
Methylosinus sp. Ce-a6 [BGJX]
119215
119308
+
Ser
GCT
[ENA]
¡û
>W2010080297
BGJY01000031
Alphaproteobacteria
Methylosinus sporium DSM 17706 [BGJY]
10767
10860
+
Ser
GCT
[ENA]
¡û
>W2010162344
CABDXI020000001
Alphaproteobacteria
Beijerinckiaceae bacterium RH CH11 [CABDXI]
2231995
2232088
+
Ser
GCT
[ENA]
¡û
>W2010162391
CABDXJ020000001
Alphaproteobacteria
Beijerinckiaceae bacterium RH AL8 [CABDXJ]
2232015
2232108
+
Ser
GCT
[ENA]
¡û
>W2010530234
JAAOLE020000001
Alphaproteobacteria
Bradyrhizobium sp. 1S1 [JAAOLE]
5307261
5307354
+
Ser
GCT
[ENA]
¡û
>W2010597406
JABFDM010000008
Alphaproteobacteria
Bradyrhizobium sp. 83002 [JABFDM]
212195
212102
-
Ser
GCT
[ENA]
¡û
>W2010597467
JABFDN010000013
Alphaproteobacteria
Bradyrhizobium sp. 83012 [JABFDN]
142470
142377
-
Ser
GCT
[ENA]
¡û
>W2010597494
JABFDO010000007
Alphaproteobacteria
Bradyrhizobium sp. 81013 [JABFDO]
221787
221880
+
Ser
GCT
[ENA]
¡û
>W2010597564
JABFDP010000078
Alphaproteobacteria
Bradyrhizobium sp. LMG 8443 [JABFDP]
920
1013
+
Ser
GCT
[ENA]
¡û
>W2010640306
JABVZT010000061
Alphaproteobacteria
Rhodopseudomonas palustris 4810 [JABVZT]
8366
8273
-
Ser
GCT
[ENA]
¡û
>W2010727751
JACIGB010000007
Alphaproteobacteria
Rhodoblastus acidophilus 10050 [JACIGB]
143199
143292
+
Ser
GCT
[ENA]
¡û
>W2010727790
JACIGC010000002
Alphaproteobacteria
Rhodoblastus sphagnicola DSM 16996 [JACIGC]
7584
7677
+
Ser
GCT
[ENA]
¡û
>W2010754572
JHAA01000002
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
359963
359870
-
Ser
GCT
[ENA]
¡û
>W2010769808
LBJM01000089
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 51787 [LBJM]
76059
76152
+
Ser
GCT
[ENA]
¡û
>W2010967029
NHSJ01000074
Alphaproteobacteria
Rhodoblastus sphagnicola DSM 16996 [NHSJ]
39337
39244
-
Ser
GCT
[ENA]
¡û
>W2011021244
NPET01000007
Alphaproteobacteria
Rhodoblastus acidophilus DSM 137 [NPET]
36196
36289
+
Ser
GCT
[ENA]
¡û
>W2011063854
NRRJ01000017
Alphaproteobacteria
Rhodoblastus acidophilus DSM 137 [NRRJ]
36353
36446
+
Ser
GCT
[ENA]
¡û
>W2011063899
NRSI01000013
Alphaproteobacteria
Rhodopseudomonas palustris DSM 126 [NRSI]
70981
71074
+
Ser
GCT
[ENA]
¡û
>W2011219819
PSRS01000154
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
4434
4341
-
Ser
GCT
[ENA]
¡û
>W2011230992
PXZG01000001
Alphaproteobacteria
Bradyrhizobium sp. WBAH10 [PXZG]
652394
652487
+
Ser
GCT
[ENA]
¡û
>W2011237067
QDFX01000003
Alphaproteobacteria
Rhizobiaceae bacterium CPCC 101076 [QDFX]
12050
11957
-
Ser
GCT
[ENA]
¡û
>W2011282811
QPFS01000024
Alphaproteobacteria
Rhodopseudomonas sp. WA056 [QPFS]
43287
43194
-
Ser
GCT
[ENA]
¡û
>W2011292539
QTKI01000003
Alphaproteobacteria
Rhodopseudomonas sp. BR0C11 [QTKI]
4577
4670
+
Ser
GCT
[ENA]
¡û
>W2011305333
QUMK01000040
Alphaproteobacteria
Rhodopseudomonas sp. BR0M22 [QUMK]
11206
11299
+
Ser
GCT
[ENA]
¡û
>W2011305399
QUML01000057
Alphaproteobacteria
Rhodopseudomonas sp. BR0G17 [QUML]
3297
3204
-
Ser
GCT
[ENA]
¡û
>W2011323684
QWVU01000093
Alphaproteobacteria
Rhodopseudomonas palustris R1 [QWVU]
1100
1193
+
Ser
GCT
[ENA]
¡û
>W2011344720
QYYC01000050
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.37 [QYYC]
529343
529250
-
Ser
GCT
[ENA]
¡û
>W2011344733
QYYD01000005
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.18 [QYYD]
97005
97098
+
Ser
GCT
[ENA]
¡û
>W2011452073
RKMK01000005
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 51770 [RKMK]
160825
160918
+
Ser
GCT
[ENA]
¡û
>W2011659075
SOEJ01000007
Alphaproteobacteria
Methylosinus sp. sav-2 [SOEJ]
163796
163889
+
Ser
GCT
[ENA]
¡û
>W2011812715
UFQQ01000030
Alphaproteobacteria
Rhodopseudomonas pentothenatexigens JA575 [UFQQ]
49949
49856
-
Ser
GCT
[ENA]
¡û
>W2012061575
VJMF01000063
Alphaproteobacteria
Methylosinus sporium SM89A [VJMF]
13374
13281
-
Ser
GCT
[ENA]
¡û
>W2012398784
WNKS01000030
Alphaproteobacteria
Rhodoblastus acidophilus DSM 142 [WNKS]
23906
23999
+
Ser
GCT
[ENA]
¡û
>W2012408118
WOVC01000013
Alphaproteobacteria
Methylosinus sp. RM1 [WOVC]
19663
19570
-
Ser
GCT
[ENA]
¡û
>W2110160863
JAAVUS010000004
Alphaproteobacteria
Bradyrhizobium sp. dw_78 [JAAVUS]
221468
221561
+
Ser
GCT
[ENA]
¡û
>W2110358628
JADNQW010000005
Alphaproteobacteria
Methylosinus sp. H3A [JADNQW]
3302675
3302582
-
Ser
GCT
[ENA]
¡û
>W2110396739
JADYVX010000005
Alphaproteobacteria
Bradyrhizobium sp. BRP22 [JADYVX]
228787
228694
-
Ser
GCT
[ENA]
¡û
>W2110471936
JAFCJJ010000019
Alphaproteobacteria
Bradyrhizobium diazoefficiens SZCCT0423 [JAFCJJ]
107531
107624
+
Ser
GCT
[ENA]
¡û
>W2110472070
JAFCJM010000018
Alphaproteobacteria
Bradyrhizobium liaoningense SZCCT0420 [JAFCJM]
9414
9507
+
Ser
GCT
[ENA]
¡û
>W2110472564
JAFCJW010000011
Alphaproteobacteria
Bradyrhizobium japonicum SZCCT0395 [JAFCJW]
196089
195996
-
Ser
GCT
[ENA]
¡û
>W2110472593
JAFCJX010000006
Alphaproteobacteria
Bradyrhizobium jicamae SZCCT0349 [JAFCJX]
180716
180809
+
Ser
GCT
[ENA]
¡û
>W2110473332
JAFCKM010000013
Alphaproteobacteria
Bradyrhizobium japonicum SZCCT0280 [JAFCKM]
8742
8649
-
Ser
GCT
[ENA]
¡û
>W2110474446
JAFCLK010000023
Alphaproteobacteria
Bradyrhizobium denitrificans SZCCT0094 [JAFCLK]
88924
89017
+
Ser
GCT
[ENA]
¡û
>W2110474611
JAFCLO010000002
Alphaproteobacteria
Bradyrhizobium liaoningense SZCCT0008 [JAFCLO]
297609
297702
+
Ser
GCT
[ENA]
¡û
>W2110475663
JAFCMH010000007
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0124 [JAFCMH]
501978
502071
+
Ser
GCT
[ENA]
¡û
>W2110591507
JAHBRW010000001
Alphaproteobacteria
Chelatococcus sp. YT9 [JAHBRW]
3446361
3446454
+
Ser
GCT
[ENA]
¡û
>W2110591589
JAHBRX010000001
Alphaproteobacteria
Chelatococcus sp. HY11 [JAHBRX]
1650943
1650850
-
Ser
GCT
[ENA]
¡û
>W2110591638
JAHBRY010000001
Alphaproteobacteria
Chelatococcus asaccharovorans DSM 6462 [JAHBRY]
1256575
1256482
-
Ser
GCT
[ENA]
¡û
>W2110617613
JAHLJF010000001
Alphaproteobacteria
Methylosinus sp. KRF6 [JAHLJF]
1124008
1124101
+
Ser
GCT
[ENA]
¡û
>W2110687553
JAINDZ010000001
Alphaproteobacteria
Methylosinus sp. Sm6 [JAINDZ]
321372
321279
-
Ser
GCT
[ENA]
¡û
>C201096563
CP041387
Alphaproteobacteria
Rhodopseudomonas palustris GJ-22 [CP041387]
1696993
1696900
-
Ser
GCT
-
¡û
>C211116605
CP058354
Alphaproteobacteria
Bradyrhizobium japonicum 5038 [CP058354]
5374912
5374819
-
Ser
GCT
-
¡û
>C211230457
CP066699
Alphaproteobacteria
Rhodopseudomonas palustris RCB100 [CP066699]
2733687
2733594
-
Ser
GCT
-
¡û
>C211324983
CP073764
Alphaproteobacteria
Methylovirgula sp. HY1 [CP073764]
391847
391754
-
Ser
GCT
-
¡û
>C231107075
CP066351
Alphaproteobacteria
Bradyrhizobium japonicum S06B-BJ [CP066351]
6427754
6427661
-
Ser
GCT
-
¡û
>C231154308
CP076676
Alphaproteobacteria
Rhodopseudomonas palustris TLS06 [CP076676]
2650081
2649988
-
Ser
GCT
-
¡û
>C231154354
CP076677
Alphaproteobacteria
Rhodopseudomonas palustris PP803 [CP076677]
2718357
2718264
-
Ser
GCT
-
¡û
>C231154404
CP076678
Alphaproteobacteria
Rhodopseudomonas palustris KTSSR54 [CP076678]
2629276
2629183
-
Ser
GCT
-
¡û
>C231154453
CP076679
Alphaproteobacteria
Rhodopseudomonas palustris VNW64 [CP076679]
2825338
2825245
-
Ser
GCT
-
¡û
>W10112820
ADFI01000010
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
81617
81524
-
Ser
GCT
[ENA]
¡û
>C231250664
CP088156
Alphaproteobacteria
Bradyrhizobium sp. A19 [CP088156]
1745154
1745247
+
Ser
GCT
-
¡û
>C231252865
CP088288
Alphaproteobacteria
Bradyrhizobium septentrionale 162S2 [CP088288]
7886458
7886551
+
Ser
GCT
-
¡û
>C231485998
CP104171
Alphaproteobacteria
Bradyrhizobium sp. NC92 [CP104171]
4751472
4751379
-
Ser
GCT
-
¡û
>C231545350
CP113083
Alphaproteobacteria
Rhodopseudomonas palustris CGA0092 [CP113083]
2744295
2744202
-
Ser
GCT
-
¡û
>C231568998
CP115713
Alphaproteobacteria
Rhodopseudomonas palustris k7 [CP115713]
2824923
2824830
-
Ser
GCT
-
¡û
>C241005252
AP022332
Alphaproteobacteria
Methylosinus sp. C49 [AP022332]
2924064
2924157
+
Ser
GCT
-
¡û
>W10118822
ADVE01000007
Alphaproteobacteria
Methylosinus trichosporium OB3b [ADVE]
19053
18960
-
Ser
GCT
[ENA]
¡û
>C241174677
CP058907
Alphaproteobacteria
Rhodopseudomonas palustris CGMCC 1.2180 [CP058907]
2567466
2567373
-
Ser
GCT
-
¡û
>C241188061
CP094515
Alphaproteobacteria
Bradyrhizobium sp. ISRA426 [CP094515]
3921704
3921797
+
Ser
GCT
-
¡û
>C241188155
CP094517
Alphaproteobacteria
Bradyrhizobium sp. ISRA432 [CP094517]
3874823
3874916
+
Ser
GCT
-
¡û
>C241229968
CP116810
Alphaproteobacteria
Rhodopseudomonas palustris CGA009 [CP116810]
2744973
2744880
-
Ser
GCT
-
¡û
>C241237352
CP119869
Alphaproteobacteria
Methylosinus trichosporium OB3b [CP119869]
2594045
2593952
-
Ser
GCT
-
¡û
>C241354881
CP140155
Alphaproteobacteria
Rhodopseudomonas palustris ATCC 17000 [CP140155]
1031103
1031010
-
Ser
GCT
-
¡û
>C242000682
CP138298
Alphaproteobacteria
Bradyrhizobium japonicum CNPSo 24 [CP138298]
3937705
3937798
+
Ser
GCT
-
¡û
>C10110777
CP001096
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [CP001096]
2925586
2925493
-
Ser
GCT
[Ensembl]
¡û
>W11116047
ADFI01000010
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
81617
81524
-
Ser
GCT
[ENA]
¡û
>C11118758
CP002418
Alphaproteobacteria
Rhodopseudomonas palustris [CP002418]
3292676
3292769
+
Ser
GCT
[Ensembl]
¡û
>W11124994
ADVE01000007
Alphaproteobacteria
Methylosinus trichosporium OB3b [ADVE]
19053
18960
-
Ser
GCT
[ENA]
¡û
>W1511625957
LCZM01000258
Alphaproteobacteria
Rhodopseudomonas palustris 42OL [LCZM]
14792
14699
-
Ser
GCT
[ENA]
¡û
>C121000469
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
4711092
4711185
+
Ser
GCT
[Ensembl]
¡û
>C161107925
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
4501632
4501725
+
Ser
GCT
-
¡û
>W121127135
CAFI01000290
Alphaproteobacteria
Bradyrhizobium sp. ORS 375 [CAFI]
104
11
-
Ser
GCT
[ENA]
¡û
>W121127171
CAFJ01000251
Alphaproteobacteria
Bradyrhizobium sp. STM 3809 [CAFJ]
15686
15593
-
Ser
GCT
[ENA]
¡û
>C131000837
AP012603
Alphaproteobacteria
Bradyrhizobium oligotrophicum S58 [AP012603]
3720036
3719943
-
Ser
GCT
[Ensembl]
¡û
>W1610649517
LJIC01000041
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
826
733
-
Ser
GCT
[ENA]
¡û
>W1610941014
LUUM01000090
Alphaproteobacteria
Methylosinus sp. R-45379 [LUUM]
6964
6871
-
Ser
GCT
[ENA]
¡û
>W1611012755
LXWX01000035
Alphaproteobacteria
Methylosinus sp. 3S-1 [LXWX]
135886
135793
-
Ser
GCT
[ENA]
¡û
>W1710513031
FMZW01000001
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
348304
348397
+
Ser
GCT
[ENA]
¡û
>W1710535158
FNSI01000001
Alphaproteobacteria
Beijerinckia sp. 28-YEA-48 [FNSI]
911360
911267
-
Ser
GCT
[ENA]
¡û
>W1710536569
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
1254233
1254326
+
Ser
GCT
[ENA]
¡û
>W1710548427
FODT01000010
Alphaproteobacteria
Rhodopseudomonas pseudopalustris [FODT]
33612
33519
-
Ser
GCT
[ENA]
¡û
>W1710564293
FOQJ01000020
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
27560
27467
-
Ser
GCT
[ENA]
¡û
>W1710567161
FOSN01000002
Alphaproteobacteria
Methylocapsa palsarum [FOSN]
65134
65041
-
Ser
GCT
[ENA]
¡û
>W1710609864
FYDG01000007
Alphaproteobacteria
Rhodoblastus acidophilus [FYDG]
121976
121883
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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