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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.55597 (6 seq.)
>C181001220
AP017312
Bacillota
Aneurinibacillus soli CB4 [AP017312]
470231
470319
+
Ser
TGA
-
¡û
>C181001253
AP017312
Bacillota
Aneurinibacillus soli CB4 [AP017312]
886628
886716
+
Ser
TGA
-
¡û
>C181001288
AP017312
Bacillota
Aneurinibacillus soli CB4 [AP017312]
3973585
3973497
-
Ser
TGA
-
¡û
>C181001314
AP017312
Bacillota
Aneurinibacillus soli CB4 [AP017312]
3706075
3705987
-
Ser
TGA
-
¡û
>C181001327
AP017312
Bacillota
Aneurinibacillus soli CB4 [AP017312]
3464833
3464745
-
Ser
TGA
-
¡û
>ENV09003257
ADGO01013839
Compost metagenome contig00001
475
387
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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