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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.57026 (261 seq.)
>W1710870409
LMKM01000011
Bacteroidota
Pedobacter sp. Leaf216 [LMKM]
68492
68405
-
Ser
TGA
[ENA]
¡û
>W1710871289
LMLE01000012
Bacteroidota
Pedobacter sp. Leaf41 [LMLE]
100914
100999
+
Ser
TGA
[ENA]
¡û
>W1711069166
LSFL01000007
Bacteroidota
Polaribacter reichenbachii [LSFL]
1248
1163
-
Ser
TGA
[ENA]
¡û
>W1711168260
LVXG01000020
Bacteroidota
Niastella yeongjuensis [LVXG]
66170
66255
+
Ser
TGA
[ENA]
¡û
>W1711413552
MGWI01000014
Bacteroidota
Flavobacteria bacterium GWF1_32_7 [MGWI]
8630
8545
-
Ser
TGA
[ENA]
¡û
>W1711502843
MKTB01000018
Bacteroidota
Bacteroidetes bacterium 43-16 [MKTB]
80308
80223
-
Ser
TGA
[ENA]
¡û
>W1711504401
MKUN01000029
Bacteroidota
Bacteroidetes bacterium 46-16 [MKUN]
203415
203330
-
Ser
TGA
[ENA]
¡û
>W1711506244
MKWF01000067
Bacteroidota
Sphingobacteriales bacterium 40-81 [MKWF]
43110
43023
-
Ser
TGA
[ENA]
¡û
>W1711713305
MTCY01000034
Bacteroidota
Flavobacterium oreochromis columnare [MTCY]
13812
13725
-
Ser
TGA
[ENA]
¡û
>W1711713312
MTCY01000043
Bacteroidota
Flavobacterium oreochromis columnare [MTCY]
24371
24458
+
Ser
TGA
[ENA]
¡û
>W1711713342
MTCZ01000016
Bacteroidota
Flavobacterium davisii columnare [MTCZ]
17917
17832
-
Ser
TGA
[ENA]
¡û
>W1711713357
MTCZ01000052
Bacteroidota
Flavobacterium davisii columnare [MTCZ]
12721
12634
-
Ser
TGA
[ENA]
¡û
>W1711713411
MTDA01000017
Bacteroidota
Flavobacterium covae columnare [MTDA]
40399
40486
+
Ser
TGA
[ENA]
¡û
>W1711713415
MTDA01000023
Bacteroidota
Flavobacterium covae columnare [MTDA]
20145
20230
+
Ser
TGA
[ENA]
¡û
>W1711713459
MTDC01000038
Bacteroidota
Flavobacterium covae columnare [MTDC]
11278
11193
-
Ser
TGA
[ENA]
¡û
>W1711713462
MTDC01000056
Bacteroidota
Flavobacterium covae columnare [MTDC]
12060
12147
+
Ser
TGA
[ENA]
¡û
>W1711737975
MUAW01000001
Bacteroidota
Flavobacterium columnare [MUAW]
456321
456408
+
Ser
TGA
[ENA]
¡û
>W1711738000
MUAW01000002
Bacteroidota
Flavobacterium columnare [MUAW]
563453
563540
+
Ser
TGA
[ENA]
¡û
>W1712082047
NHOT01000002
Bacteroidota
Pedobacter sp. AJM [NHOT]
203190
203275
+
Ser
TGA
[ENA]
¡û
>C171094194
CP019419
Bacteroidota
Polaribacter reichenbachii 6Alg 8T [CP019419]
2442766
2442851
+
Ser
TGA
-
¡û
>C171117364
CP021237
Bacteroidota
Sphingobacteriaceae bacterium GW460-11-11-14-LB5 [CP021237]
373736
373649
-
Ser
TGA
-
¡û
>w023492
AAXX01000001
Bacteroidota
Flavobacteria bacterium BAL38 [AAXX]
23789
23700
-
Ser
TGA
[ENA]
¡û
>WENV180041348
LLBZ010102467
[LLBZ] soil metagenome; soil from tomato rhizosphere
11592
11677
+
Ser
TGA
[ENA]
¡û
>W141007846
AGYB01000032
Bacteroidota
Bergeyella zoohelcum CCUG 30536 [AGYB]
37520
37607
+
Ser
TGA
[ENA]
¡û
>WENV180375449
OBOL01011821
[OBOL] marine metagenome; Surface water
271
356
+
Ser
TGA
[ENA]
¡û
>WENV180398031
OBPZ01057473
[OBPZ] marine metagenome; ENVO:00002010
53
138
+
Ser
TGA
[ENA]
¡û
>WENV180593888
OCOY01002121
[OCOY] marine metagenome; ENVO:00002010
1825
1740
-
Ser
TGA
[ENA]
¡û
>WENV180694693
OCZS012576929
[OCZS] soil metagenome; soil
235
150
-
Ser
TGA
[ENA]
¡û
>WENV181168190
OEIU01196263
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
398
484
+
Ser
TGA
[ENA]
¡û
>WENV181170465
OEIV010049350
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
893
978
+
Ser
TGA
[ENA]
¡û
>WENV181368078
OFQG01003544
[OFQG] freshwater metagenome; Freshwater Lake
463
376
-
Ser
TGA
[ENA]
¡û
>WENV181376413
OFQZ01042324
[OFQZ] wastewater metagenome; Exp Tend NO 0WW
701
788
+
Ser
TGA
[ENA]
¡û
>W141142858
AWRU01000008
Bacteroidota
Pedobacter sp. V48 [AWRU]
16149
16062
-
Ser
TGA
[ENA]
¡û
>WENV181838766
OGVN01017250
[OGVN] freshwater metagenome; freshwater
290
203
-
Ser
TGA
[ENA]
¡û
>WENV181841135
OGVQ01006021
[OGVQ] freshwater metagenome; freshwater
444
529
+
Ser
TGA
[ENA]
¡û
>WENV181843444
OGVU01015505
[OGVU] freshwater metagenome; freshwater
719
804
+
Ser
TGA
[ENA]
¡û
>WENV181855453
OGWL01020131
[OGWL] freshwater metagenome; freshwater
48
133
+
Ser
TGA
[ENA]
¡û
>WENV181857436
OGWO01005125
[OGWO] freshwater metagenome; freshwater
118
33
-
Ser
TGA
[ENA]
¡û
>WENV182550474
OJCA01003771
[OJCA] seawater metagenome; Sea water
2092
2177
+
Ser
TGA
[ENA]
¡û
>WENV182550763
OJCB01000026
[OJCB] seawater metagenome; Sea water
73044
72959
-
Ser
TGA
[ENA]
¡û
>WENV182553680
OJCR01021128
[OJCR] seawater metagenome; Sea water
292
377
+
Ser
TGA
[ENA]
¡û
>WENV182555170
OJCY01006677
[OJCY] seawater metagenome; Sea water
500
585
+
Ser
TGA
[ENA]
¡û
>WENV182557969
OJDL01001131
[OJDL] seawater metagenome; Sea water
6964
6879
-
Ser
TGA
[ENA]
¡û
>WENV182565443
OJEH01005366
[OJEH] seawater metagenome; Sea water
2127
2212
+
Ser
TGA
[ENA]
¡û
>WENV182569252
OJEY01004393
[OJEY] seawater metagenome; Sea water
791
876
+
Ser
TGA
[ENA]
¡û
>WENV182570352
OJFC01002771
[OJFC] seawater metagenome; Sea water
1331
1416
+
Ser
TGA
[ENA]
¡û
>WENV182571789
OJFK01011148
[OJFK] seawater metagenome; Sea water
184
269
+
Ser
TGA
[ENA]
¡û
>WENV182573506
OJFP01002911
[OJFP] seawater metagenome; Sea water
4363
4448
+
Ser
TGA
[ENA]
¡û
>WENV182574358
OJFR01006189
[OJFR] seawater metagenome; Sea water
615
530
-
Ser
TGA
[ENA]
¡û
>WENV182579059
OJGS01000096
[OJGS] seawater metagenome; Sea water
33104
33019
-
Ser
TGA
[ENA]
¡û
>WENV182580932
OJGW01031005
[OJGW] seawater metagenome; Sea water
612
527
-
Ser
TGA
[ENA]
¡û
>WENV182581000
OJGW01048377
[OJGW] seawater metagenome; Sea water
194
279
+
Ser
TGA
[ENA]
¡û
>WENV182584458
OJHG01000344
[OJHG] seawater metagenome; Sea water
547
632
+
Ser
TGA
[ENA]
¡û
>WENV182587820
OJHN01015074
[OJHN] seawater metagenome; Sea water
483
568
+
Ser
TGA
[ENA]
¡û
>WENV182590694
OJIK01000025
[OJIK] seawater metagenome; Sea water
24246
24331
+
Ser
TGA
[ENA]
¡û
>WENV182591616
OJIO01000849
[OJIO] seawater metagenome; Sea water
1120
1035
-
Ser
TGA
[ENA]
¡û
>WENV182594069
OJIV01000208
[OJIV] seawater metagenome; Sea water
20620
20705
+
Ser
TGA
[ENA]
¡û
>WENV183056104
OLHI01000081
[OLHI] seawater metagenome; Sea water
1814
1899
+
Ser
TGA
[ENA]
¡û
>WENV183058713
OLHR01005991
[OLHR] seawater metagenome; Sea water
159
74
-
Ser
TGA
[ENA]
¡û
>WENV183060740
OLHY01003299
[OLHY] seawater metagenome; Sea water
900
985
+
Ser
TGA
[ENA]
¡û
>WENV183061295
OLHZ01003009
[OLHZ] seawater metagenome; Sea water
1234
1149
-
Ser
TGA
[ENA]
¡û
>WENV183062142
OLID01000145
[OLID] seawater metagenome; Sea water
4552
4637
+
Ser
TGA
[ENA]
¡û
>WENV183064911
OLII01003275
[OLII] seawater metagenome; Sea water
47
132
+
Ser
TGA
[ENA]
¡û
>WENV183065058
OLII01016447
[OLII] seawater metagenome; Sea water
591
506
-
Ser
TGA
[ENA]
¡û
>W141350112
JCKI01000006
Bacteroidota
Pedobacter sp. R20-19 [JCKI]
46887
46802
-
Ser
TGA
[ENA]
¡û
>WENV183708630
PDWI01018238
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1017
932
-
Ser
TGA
[ENA]
¡û
>WENV183714533
PDWI01189402
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1166
1081
-
Ser
TGA
[ENA]
¡û
>WENV183728261
PJTQ01000006
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
257672
257757
+
Ser
TGA
[ENA]
¡û
>WENV183729165
PJTQ01007854
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
226
141
-
Ser
TGA
[ENA]
¡û
>WENV183730895
PJTS01001857
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
3566
3651
+
Ser
TGA
[ENA]
¡û
>WENV183731060
PJTS01006023
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
1781
1867
+
Ser
TGA
[ENA]
¡û
>WENV183734826
PJUA01000037
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
76799
76884
+
Ser
TGA
[ENA]
¡û
>WENV183736018
PJUC01000001
[PJUC] soil metagenome; Soil enriched on filter paper
257672
257757
+
Ser
TGA
[ENA]
¡û
>WENV183736835
PJUD01000052
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
178017
178104
+
Ser
TGA
[ENA]
¡û
>WENV183737060
PJUD01000321
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
8119
8206
+
Ser
TGA
[ENA]
¡û
>WENV183738629
PJUE01000052
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
178017
178104
+
Ser
TGA
[ENA]
¡û
>WENV183738904
PJUE01000402
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
8119
8206
+
Ser
TGA
[ENA]
¡û
>WENV170229469
CEQG01123306
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
902
989
+
Ser
TGA
[ENA]
¡û
>WENV170920242
MDTF01016356
[MDTF] marine metagenome; seawater
40
127
+
Ser
TGA
[ENA]
¡û
>WENV170937335
MDTG01289899
[MDTG] marine metagenome; seawater
523
436
-
Ser
TGA
[ENA]
¡û
>WENV170980890
MWVT01006231
[MWVT] soil metagenome; TG5-1 sample; Antarctic (ecotone) soil
2156
2243
+
Ser
TGA
[ENA]
¡û
>WENV170983777
MWVV01088207
[MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil
375
462
+
Ser
TGA
[ENA]
¡û
>WENV170985069
MWVW01017488
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
285
370
+
Ser
TGA
[ENA]
¡û
>WENV170985114
MWVW01024306
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
817
730
-
Ser
TGA
[ENA]
¡û
>WENV170985360
MWVW01077353
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
6
91
+
Ser
TGA
[ENA]
¡û
>WENV170985412
MWVW01095600
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
86
-1
-
Ser
TGA
[ENA]
¡û
>WENV170992159
MWWB01003754
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
252
165
-
Ser
TGA
[ENA]
¡û
>WENV170994602
MWWE01014342
[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil
301
216
-
Ser
TGA
[ENA]
¡û
>WENV170996907
MWWG01004445
[MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil
281
196
-
Ser
TGA
[ENA]
¡û
>WENV170999247
MWWK01009618
[MWWK] soil metagenome; BG12-3 sample; Antarctic (ecotone) soil
1000
1085
+
Ser
TGA
[ENA]
¡û
>WENV171003111
NNBT01001364
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
198994
198907
-
Ser
TGA
[ENA]
¡û
>C181047429
CP020918
Bacteroidota
Flavobacterium faecale WV33 [CP020918]
3907757
3907844
+
Ser
TGA
-
¡û
>C181047436
CP020918
Bacteroidota
Flavobacterium faecale WV33 [CP020918]
2783431
2783346
-
Ser
TGA
-
¡û
>C181094347
CP024091
Bacteroidota
Pedobacter ginsengisoli T01R-27 [CP024091]
2347560
2347645
+
Ser
TGA
-
¡û
>C191008577
CP010992
Bacteroidota
Flavobacterium columnare B185 [CP010992]
1987154
1987239
+
Ser
TGA
-
¡û
>C191008630
CP010992
Bacteroidota
Flavobacterium columnare B185 [CP010992]
943687
943602
-
Ser
TGA
-
¡û
>C191065613
CP029760
Bacteroidota
Riemerella anatipestifer RCAD0133 [CP029760]
508098
508013
-
Ser
TGA
-
¡û
>C191099834
CP033068
Bacteroidota
Flavobacterium sp. 140616W15 [CP033068]
2779254
2779167
-
Ser
TGA
-
¡û
>C191157519
CP038029
Bacteroidota
Sphingobacterium psychroaquaticum SJ-25 [CP038029]
1726029
1726114
+
Ser
TGA
-
¡û
>C191157553
CP038029
Bacteroidota
Sphingobacterium psychroaquaticum SJ-25 [CP038029]
1886709
1886624
-
Ser
TGA
-
¡û
>C191181544
CP040694
Bacteroidota
Elizabethkingia sp. JS20170427COW [CP040694]
1712278
1712363
+
Ser
TGA
-
¡û
>C191226447
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
5089012
5089097
+
Ser
TGA
-
¡û
>C191226448
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
5101131
5101218
+
Ser
TGA
-
¡û
>C191226449
LS999839
Bacteroidota
Pedobacter schmidteae eg [LS999839]
5121492
5121577
+
Ser
TGA
-
¡û
>W09123587
ACHA01000105
Bacteroidota
Sphingobacterium spiritivorum ATCC 33861 [ACHA]
3619
3704
+
Ser
TGA
[ENA]
¡û
>W09123594
ACHA01000117
Bacteroidota
Sphingobacterium spiritivorum ATCC 33861 [ACHA]
23722
23809
+
Ser
TGA
[ENA]
¡û
>W1910183383
BJNR01000008
Bacteroidota
Flavobacterium aquatile NBRC 15052 [BJNR]
156
69
-
Ser
TGA
[ENA]
¡û
>W1910808985
MUGU01000038
Bacteroidota
Flavobacterium columnare NBRC 100251 = ATCC 23463 [MUGU]
13234
13149
-
Ser
TGA
[ENA]
¡û
>W1910809018
MUGU01000117
Bacteroidota
Flavobacterium columnare NBRC 100251 = ATCC 23463 [MUGU]
20151
20236
+
Ser
TGA
[ENA]
¡û
>W1911533969
OLKH01000052
Bacteroidota
Flavobacterium columnare [OLKH]
18556
18641
+
Ser
TGA
[ENA]
¡û
>W1911534015
OLKH01000115
Bacteroidota
Flavobacterium columnare [OLKH]
7481
7566
+
Ser
TGA
[ENA]
¡û
>W1810503628
QBKH01000001
Bacteroidota
Sphingobacterium faecium DSM 11690 [QBKH]
750133
750046
-
Ser
TGA
[ENA]
¡û
>W1810503639
QBKH01000001
Bacteroidota
Sphingobacterium faecium DSM 11690 [QBKH]
127579
127492
-
Ser
TGA
[ENA]
¡û
>W1810503640
QBKH01000001
Bacteroidota
Sphingobacterium faecium DSM 11690 [QBKH]
85658
85571
-
Ser
TGA
[ENA]
¡û
>W1810543360
QDKG01000001
Bacteroidota
Sphingobacterium corticibacter 2c-3 [QDKG]
540642
540557
-
Ser
TGA
[ENA]
¡û
>W1810543372
QDKG01000003
Bacteroidota
Sphingobacterium corticibacter 2c-3 [QDKG]
5818
5733
-
Ser
TGA
[ENA]
¡û
>W1810692636
QLKR01000003
Bacteroidota
Niabella yanshanensis HAMBI_3031 [QLKR]
507719
507634
-
Ser
TGA
[ENA]
¡û
>W1810720073
QNQU01000004
Bacteroidota
Pedobacter miscanthi RS10 [QNQU]
113819
113734
-
Ser
TGA
[ENA]
¡û
>W1810885481
QUNJ01000002
Bacteroidota
Pedobacter sp. YR510 [QUNJ]
1193601
1193688
+
Ser
TGA
[ENA]
¡û
>W1810885520
QUNJ01000004
Bacteroidota
Pedobacter sp. YR510 [QUNJ]
341150
341063
-
Ser
TGA
[ENA]
¡û
>C151047396
CP009278
Bacteroidota
Sphingobacterium sp. ML3W [CP009278]
1871793
1871708
-
Ser
TGA
[Ensembl]
¡û
>C151047407
CP009278
Bacteroidota
Sphingobacterium sp. ML3W [CP009278]
1350065
1349978
-
Ser
TGA
[Ensembl]
¡û
>C151047408
CP009278
Bacteroidota
Sphingobacterium sp. ML3W [CP009278]
1298961
1298874
-
Ser
TGA
[Ensembl]
¡û
>W2010096998
BJNR01000008
Bacteroidota
Flavobacterium aquatile NBRC 15052 [BJNR]
156
69
-
Ser
TGA
[ENA]
¡û
>W2010102873
BJXG01000008
Bacteroidota
Sphingobacterium faecium NBRC 15299 [BJXG]
239650
239563
-
Ser
TGA
[ENA]
¡û
>W2010369040
CAESCM010000001
Bacteroidota
Pedobacter sp. Marseille-Q2390 [CAESCM]
497187
497272
+
Ser
TGA
[ENA]
¡û
>W2010402876
FUKX01000011
Bacteroidota
Sphingobacterium faecium PCAi_F2.5 [FUKX]
120156
120243
+
Ser
TGA
[ENA]
¡û
>W2010402913
FUKX01000040
Bacteroidota
Sphingobacterium faecium PCAi_F2.5 [FUKX]
178343
178430
+
Ser
TGA
[ENA]
¡û
>W2010402914
FUKX01000040
Bacteroidota
Sphingobacterium faecium PCAi_F2.5 [FUKX]
222253
222340
+
Ser
TGA
[ENA]
¡û
>W2010570739
JAAUVN010000001
Bacteroidota
Sphingobacterium kitahiroshimense B16 [JAAUVN]
310289
310204
-
Ser
TGA
[ENA]
¡û
>W2010570774
JAAUVN010000005
Bacteroidota
Sphingobacterium kitahiroshimense B16 [JAAUVN]
63873
63788
-
Ser
TGA
[ENA]
¡û
>W2010570775
JAAUVN010000005
Bacteroidota
Sphingobacterium kitahiroshimense B16 [JAAUVN]
23743
23656
-
Ser
TGA
[ENA]
¡û
>W2010609553
JABMKV010000001
Bacteroidota
Pedobacter boryungensis LMG 31300 [JABMKV]
1021561
1021646
+
Ser
TGA
[ENA]
¡û
>W2010696188
JACHCQ010000001
Bacteroidota
Pedobacter sp. AK013 [JACHCQ]
171722
171807
+
Ser
TGA
[ENA]
¡û
>W2010725538
JACIEF010000002
Bacteroidota
Pedobacter zeae DSM 100774 [JACIEF]
434967
434882
-
Ser
TGA
[ENA]
¡û
>W2010762240
JUIX01000011
Bacteroidota
Flavobacterium sp. TCH3-2 [JUIX]
82768
82853
+
Ser
TGA
[ENA]
¡û
>W2010762247
JUIX01000016
Bacteroidota
Flavobacterium sp. TCH3-2 [JUIX]
36967
37052
+
Ser
TGA
[ENA]
¡û
>W2010904293
MSCN01000001
Bacteroidota
Polaribacter porphyrae NBRC 108759 [MSCN]
1640882
1640797
-
Ser
TGA
[ENA]
¡û
>W2010913663
MUGQ01000006
Bacteroidota
Flavobacterium aquatile ATCC 11947 [MUGQ]
149965
150052
+
Ser
TGA
[ENA]
¡û
>W2011157446
OCMT01000001
Bacteroidota
Pedobacter xixiisoli CGMCC 1.12803 [OCMT]
1251288
1251203
-
Ser
TGA
[ENA]
¡û
>W2011157447
OCMT01000001
Bacteroidota
Pedobacter xixiisoli CGMCC 1.12803 [OCMT]
1250816
1250730
-
Ser
TGA
[ENA]
¡û
>W2011402477
RCSU01000016
Bacteroidota
Pseudoflavitalea rhizosphaerae KACC 18655 [RCSU]
22186
22101
-
Ser
TGA
[ENA]
¡û
>W2011529273
SAYW01000001
Bacteroidota
Pedobacter chitinilyticus CM134L-2 [SAYW]
742696
742781
+
Ser
TGA
[ENA]
¡û
>W2011529274
SAYW01000001
Bacteroidota
Pedobacter chitinilyticus CM134L-2 [SAYW]
743599
743684
+
Ser
TGA
[ENA]
¡û
>W2011532244
SBKO01000002
Bacteroidota
Flavobacterium sp. LLJ-11 [SBKO]
508757
508842
+
Ser
TGA
[ENA]
¡û
>W2011638517
SMNH02000002
Bacteroidota
Kordia sp. TARA_039_SRF [SMNH]
82844
82759
-
Ser
TGA
[ENA]
¡û
>W2011652590
SNZV01000005
Bacteroidota
Sphingobacterium paludis CGMCC 1.12801 [SNZV]
441824
441911
+
Ser
TGA
[ENA]
¡û
>W2011652608
SNZV01000013
Bacteroidota
Sphingobacterium paludis CGMCC 1.12801 [SNZV]
45402
45489
+
Ser
TGA
[ENA]
¡û
>W2011666194
SOSG01000001
Bacteroidota
Pedobacter borealis 19a [SOSG]
1210533
1210618
+
Ser
TGA
[ENA]
¡û
>W2011666197
SOSG01000001
Bacteroidota
Pedobacter borealis 19a [SOSG]
2638787
2638872
+
Ser
TGA
[ENA]
¡û
>W2011679559
SRMP01000004
Bacteroidota
Pedobacter sp. P-25 [SRMP]
220964
221049
+
Ser
TGA
[ENA]
¡û
>W2011679576
SRMP01000007
Bacteroidota
Pedobacter sp. P-25 [SRMP]
27466
27551
+
Ser
TGA
[ENA]
¡û
>W2011815954
UFTJ01000002
Bacteroidota
Bergeyella zoohelcum NCTC11661 [UFTJ]
53961
53876
-
Ser
TGA
[ENA]
¡û
>W2011816058
UFTL01000001
Bacteroidota
Bergeyella zoohelcum NCTC11660 [UFTL]
1758129
1758214
+
Ser
TGA
[ENA]
¡û
>W2011839980
UGYW01000002
Bacteroidota
Sphingobacterium spiritivorum NCTC11388 [UGYW]
86355
86440
+
Ser
TGA
[ENA]
¡û
>W2011840004
UGYW01000002
Bacteroidota
Sphingobacterium spiritivorum NCTC11388 [UGYW]
3824421
3824506
+
Ser
TGA
[ENA]
¡û
>W2011955277
UYIV01000001
Bacteroidota
Campylobacter insulaenigrae NCTC12929 [UYIV]
1604346
1604431
+
Ser
TGA
[ENA]
¡û
>W2011961846
VANR01000001
Bacteroidota
Polaribacter sp. DBTF-3 [VANR]
62679
62594
-
Ser
TGA
[ENA]
¡û
>W2012047576
VIVW01000002
Bacteroidota
Pedobacter terrae 518 [VIVW]
419591
419677
+
Ser
TGA
[ENA]
¡û
>W2012047604
VIVW01000006
Bacteroidota
Pedobacter terrae 518 [VIVW]
17524
17611
+
Ser
TGA
[ENA]
¡û
>W2012198224
VWSG01000002
Bacteroidota
Flavobacterium sp. SNL9 [VWSG]
279790
279875
+
Ser
TGA
[ENA]
¡û
>W2012198247
VWSG01000005
Bacteroidota
Flavobacterium sp. SNL9 [VWSG]
46677
46762
+
Ser
TGA
[ENA]
¡û
>W2012332491
WIBH01000005
Bacteroidota
Flavobacterium sp. LMO6 [WIBH]
238965
238880
-
Ser
TGA
[ENA]
¡û
>W2012332710
WIDM01000010
Bacteroidota
Sphingobacterium faecium MYb181 [WIDM]
111521
111434
-
Ser
TGA
[ENA]
¡û
>W2012332746
WIDM01000043
Bacteroidota
Sphingobacterium faecium MYb181 [WIDM]
3440
3527
+
Ser
TGA
[ENA]
¡û
>W2012332756
WIDM01000059
Bacteroidota
Sphingobacterium faecium MYb181 [WIDM]
18761
18676
-
Ser
TGA
[ENA]
¡û
>W2012373552
WLYS01000002
Bacteroidota
Sphingobacterium sp. IMCC25678 [WLYS]
712527
712612
+
Ser
TGA
[ENA]
¡û
>W2012373582
WLYS01000010
Bacteroidota
Sphingobacterium sp. IMCC25678 [WLYS]
6207
6122
-
Ser
TGA
[ENA]
¡û
>W2012377982
WMHF01000032
Bacteroidota
Flavobacterium columnare SP1809 [WMHF]
19704
19789
+
Ser
TGA
[ENA]
¡û
>W2012377991
WMHF01000038
Bacteroidota
Flavobacterium columnare SP1809 [WMHF]
13536
13451
-
Ser
TGA
[ENA]
¡û
>W2012378145
WMHI01000013
Bacteroidota
Flavobacterium columnare CC1805 [WMHI]
23156
23070
-
Ser
TGA
[ENA]
¡û
>W2012378146
WMHI01000015
Bacteroidota
Flavobacterium columnare CC1805 [WMHI]
71823
71910
+
Ser
TGA
[ENA]
¡û
>W2012378196
WMHJ01000012
Bacteroidota
Flavobacterium columnare CC1803 [WMHJ]
23156
23070
-
Ser
TGA
[ENA]
¡û
>W2012378199
WMHJ01000015
Bacteroidota
Flavobacterium columnare CC1803 [WMHJ]
71823
71910
+
Ser
TGA
[ENA]
¡û
>W2012398613
WNKE01000032
Bacteroidota
Flavobacterium columnare SP1805 [WNKE]
19238
19153
-
Ser
TGA
[ENA]
¡û
>W2012398623
WNKE01000038
Bacteroidota
Flavobacterium columnare SP1805 [WNKE]
13536
13451
-
Ser
TGA
[ENA]
¡û
>W2012429501
WSPZ01000011
Bacteroidota
Sphingobacterium sp. DK4209 [WSPZ]
124825
124910
+
Ser
TGA
[ENA]
¡û
>W2012429509
WSPZ01000016
Bacteroidota
Sphingobacterium sp. DK4209 [WSPZ]
42866
42781
-
Ser
TGA
[ENA]
¡û
>W2012457882
WVHT01000002
Bacteroidota
Pedobacter sp. HMF7647 [WVHT]
424756
424671
-
Ser
TGA
[ENA]
¡û
>W2110025926
BMHZ01000001
Bacteroidota
Pedobacter zeae CGMCC 1.15287 [BMHZ]
1082271
1082356
+
Ser
TGA
[ENA]
¡û
>W2110315571
JADFTZ010000004
Bacteroidota
Flavobacterium aquaticum 1Y8A [JADFTZ]
123893
123978
+
Ser
TGA
[ENA]
¡û
>W2110425154
JAELTN010000060
Bacteroidota
Pedobacter sp. ASV28 [JAELTN]
21959
21872
-
Ser
TGA
[ENA]
¡û
>W2110612600
JAHKQL010000002
Bacteroidota
Polaribacter vadi B2M17 [JAHKQL]
230919
230834
-
Ser
TGA
[ENA]
¡û
>C201163052
CP045652
Bacteroidota
Sphingobacterium sp. dk4302 [CP045652]
2294006
2294091
+
Ser
TGA
-
¡û
>C201163072
CP045652
Bacteroidota
Sphingobacterium sp. dk4302 [CP045652]
2528499
2528414
-
Ser
TGA
-
¡û
>C201302348
CP059431
Bacteroidota
Flavobacterium sp. xlx-214 [CP059431]
2636458
2636373
-
Ser
TGA
-
¡û
>C201302373
CP059431
Bacteroidota
Flavobacterium sp. xlx-214 [CP059431]
161964
161879
-
Ser
TGA
-
¡û
>C211026243
AP024749
Bacteroidota
Flavobacterium sp. KK2020170 [AP024749]
2510800
2510885
+
Ser
TGA
-
¡û
>C211030178
CP013012
Bacteroidota
Flavobacterium columnare B185R [CP013012]
1993427
1993512
+
Ser
TGA
-
¡û
>C211030231
CP013012
Bacteroidota
Flavobacterium columnare B185R [CP013012]
946070
945985
-
Ser
TGA
-
¡û
>C211097435
CP054495
Bacteroidota
Flavobacterium columnare F2S4 [CP054495]
2774511
2774598
+
Ser
TGA
-
¡û
>C211097462
CP054495
Bacteroidota
Flavobacterium columnare F2S4 [CP054495]
1715624
1715539
-
Ser
TGA
-
¡û
>C211097860
CP054500
Bacteroidota
Flavobacterium columnare F2R67 [CP054500]
2774510
2774597
+
Ser
TGA
-
¡û
>C211097887
CP054500
Bacteroidota
Flavobacterium columnare F2R67 [CP054500]
1715619
1715534
-
Ser
TGA
-
¡û
>C211098285
CP054505
Bacteroidota
Flavobacterium columnare F2R60 [CP054505]
2774528
2774615
+
Ser
TGA
-
¡û
>C211098312
CP054505
Bacteroidota
Flavobacterium columnare F2R60 [CP054505]
1715630
1715545
-
Ser
TGA
-
¡û
>C211098370
CP054506
Bacteroidota
Flavobacterium columnare F2R58 [CP054506]
2774528
2774615
+
Ser
TGA
-
¡û
>C211098397
CP054506
Bacteroidota
Flavobacterium columnare F2R58 [CP054506]
1715631
1715546
-
Ser
TGA
-
¡û
>C211098726
CP054510
Bacteroidota
Flavobacterium columnare F9R75 [CP054510]
1987110
1987195
+
Ser
TGA
-
¡û
>C211098779
CP054510
Bacteroidota
Flavobacterium columnare F9R75 [CP054510]
943642
943557
-
Ser
TGA
-
¡û
>C211098815
CP054511
Bacteroidota
Flavobacterium columnare F9R72 [CP054511]
1987115
1987200
+
Ser
TGA
-
¡û
>C211098868
CP054511
Bacteroidota
Flavobacterium columnare F9R72 [CP054511]
943647
943562
-
Ser
TGA
-
¡û
>C211098993
CP054513
Bacteroidota
Flavobacterium columnare F9R66 [CP054513]
1987115
1987200
+
Ser
TGA
-
¡û
>C211099046
CP054513
Bacteroidota
Flavobacterium columnare F9R66 [CP054513]
943647
943562
-
Ser
TGA
-
¡û
>C211099082
CP054514
Bacteroidota
Flavobacterium columnare F9R64 [CP054514]
1987115
1987200
+
Ser
TGA
-
¡û
>C211099135
CP054514
Bacteroidota
Flavobacterium columnare F9R64 [CP054514]
943647
943562
-
Ser
TGA
-
¡û
>C211099171
CP054516
Bacteroidota
Flavobacterium columnare F9R58 [CP054516]
1987110
1987195
+
Ser
TGA
-
¡û
>C211099224
CP054516
Bacteroidota
Flavobacterium columnare F9R58 [CP054516]
943642
943557
-
Ser
TGA
-
¡û
>C211099349
CP054518
Bacteroidota
Flavobacterium columnare FCO-F9 [CP054518]
1987148
1987233
+
Ser
TGA
-
¡û
>C211099402
CP054518
Bacteroidota
Flavobacterium columnare FCO-F9 [CP054518]
943680
943595
-
Ser
TGA
-
¡û
>C211195886
CP064939
Bacteroidota
Pedobacter sp. JBR3-12 [CP064939]
2120022
2120109
+
Ser
TGA
-
¡û
>C211241177
CP068082
Bacteroidota
Sphingobacterium spiritivorum FDAARGOS_1146 [CP068082]
251037
251122
+
Ser
TGA
-
¡û
>C211241216
CP068082
Bacteroidota
Sphingobacterium spiritivorum FDAARGOS_1146 [CP068082]
5079336
5079251
-
Ser
TGA
-
¡û
>C211241305
CP068084
Bacteroidota
Sphingobacterium spiritivorum FDAARGOS_1144 [CP068084]
4824647
4824562
-
Ser
TGA
-
¡û
>C211241308
CP068084
Bacteroidota
Sphingobacterium spiritivorum FDAARGOS_1144 [CP068084]
3911271
3911186
-
Ser
TGA
-
¡û
>C231172747
CP081934
Bacteroidota
Riemerella anatipestifer 20190507E1-1 [CP081934]
598290
598205
-
Ser
TGA
-
¡û
>C231256945
CP089095
Bacteroidota
Flavobacterium cyclinae KSM-R2A25 [CP089095]
1532198
1532283
+
Ser
TGA
-
¡û
>C231353681
CP094931
Bacteroidota
Sphingobacterium faecium WB1 [CP094931]
2315192
2315279
+
Ser
TGA
-
¡û
>C231353692
CP094931
Bacteroidota
Sphingobacterium faecium WB1 [CP094931]
3004406
3004493
+
Ser
TGA
-
¡û
>C231353693
CP094931
Bacteroidota
Sphingobacterium faecium WB1 [CP094931]
3048361
3048448
+
Ser
TGA
-
¡û
>W2110757437
PRDK01000009
Bacteroidota
Sphingobacterium sp. KB22 [PRDK]
462090
462175
+
Ser
TGA
[ENA]
¡û
>W2110757438
PRDK01000009
Bacteroidota
Sphingobacterium sp. KB22 [PRDK]
462927
463012
+
Ser
TGA
[ENA]
¡û
>C231452612
CP102382
Bacteroidota
Myroides sp. SCSIO 72103 [CP102382]
2321753
2321668
-
Ser
TGA
-
¡û
>C231452631
CP102382
Bacteroidota
Myroides sp. SCSIO 72103 [CP102382]
1955484
1955399
-
Ser
TGA
-
¡û
>C231524987
CP110002
Bacteroidota
Flavobacterium sp. N2155 [CP110002]
1019464
1019549
+
Ser
TGA
-
¡û
>C231525047
CP110002
Bacteroidota
Flavobacterium sp. N2155 [CP110002]
302728
302643
-
Ser
TGA
-
¡û
>C231525305
CP110010
Bacteroidota
Flavobacterium sp. N501239 [CP110010]
1852230
1852315
+
Ser
TGA
-
¡û
>C231604567
CP117969
Bacteroidota
Imtechella halotolerans JCM 17677 [CP117969]
647045
647130
+
Ser
TGA
-
¡û
>C231619958
CP119313
Bacteroidota
Pedobacter sp. [CP119313]
1902314
1902229
-
Ser
TGA
-
¡û
>C231619959
CP119313
Bacteroidota
Pedobacter sp. [CP119313]
1830762
1830677
-
Ser
TGA
-
¡û
>C241063071
CP042171
Bacteroidota
Pedobacter sp. KBS0701 [CP042171]
1928188
1928103
-
Ser
TGA
-
¡û
>C241063075
CP042171
Bacteroidota
Pedobacter sp. KBS0701 [CP042171]
378677
378591
-
Ser
TGA
-
¡û
>C241066000
CP042433
Bacteroidota
Flavisolibacter ginsenosidimutans Gsoil 636 [CP042433]
1275547
1275462
-
Ser
TGA
-
¡û
>C241115253
CP047050
Bacteroidota
Myroides phaeus 18QD1AZ29W [CP047050]
26810
26895
+
Ser
TGA
-
¡û
>C241115289
CP047050
Bacteroidota
Myroides phaeus 18QD1AZ29W [CP047050]
2900293
2900378
+
Ser
TGA
-
¡û
>C241115303
CP047050
Bacteroidota
Myroides phaeus 18QD1AZ29W [CP047050]
1968679
1968594
-
Ser
TGA
-
¡û
>C241138214
CP049868
Bacteroidota
Pedobacter sp. HDW13 [CP049868]
3517665
3517580
-
Ser
TGA
-
¡û
>C241352461
CP139960
Bacteroidota
Niabella yanshanensis HAMBI_3031 [CP139960]
5042131
5042046
-
Ser
TGA
-
¡û
>C241369519
CP142016
Bacteroidota
Riemerella anatipestifer 59RAST107 [CP142016]
648276
648191
-
Ser
TGA
-
¡û
>W1511108299
JJMU01000002
Bacteroidota
Sphingobacterium deserti ACCC 05744 [JJMU]
141151
141064
-
Ser
TGA
[ENA]
¡û
>W1511108341
JJMU01000074
Bacteroidota
Sphingobacterium deserti ACCC 05744 [JJMU]
19611
19698
+
Ser
TGA
[ENA]
¡û
>W1511346617
JRHH01000006
Bacteroidota
Flavobacterium aquatile LMG 4008 [JRHH]
151035
151122
+
Ser
TGA
[ENA]
¡û
>W1511646551
LECU01000003
Bacteroidota
Pedobacter sp. BMA [LECU]
298027
298112
+
Ser
TGA
[ENA]
¡û
>W1511694594
LGBR01000001
Bacteroidota
Polaribacter dokdonensis DSW-5 [LGBR]
3003641
3003556
-
Ser
TGA
[ENA]
¡û
>C161063699
CP013992
Bacteroidota
Flavobacterium covae 94-081 [CP013992]
913875
913960
+
Ser
TGA
[Ensembl]
¡û
>C161063714
CP013992
Bacteroidota
Flavobacterium covae 94-081 [CP013992]
3261118
3261031
-
Ser
TGA
[Ensembl]
¡û
>C161068698
CP014224
Bacteroidota
Wenyingzhuangia fucanilytica CZ1127 [CP014224]
1343469
1343556
+
Ser
TGA
[Ensembl]
¡û
>C161068712
CP014224
Bacteroidota
Wenyingzhuangia fucanilytica CZ1127 [CP014224]
2546169
2546082
-
Ser
TGA
[Ensembl]
¡û
>C131013446
CP004349
Bacteroidota
Polaribacter sp. MED152 [CP004349]
917860
917773
-
Ser
TGA
[Ensembl]
¡û
>W1610733635
LMLE01000012
Bacteroidota
Pedobacter sp. Leaf41 [LMLE]
100914
100999
+
Ser
TGA
[ENA]
¡û
>W1610748693
LMZQ01000007
Bacteroidota
Pedobacter ginsenosidimutans [LMZQ]
237138
237223
+
Ser
TGA
[ENA]
¡û
>W1610867527
LQXS01000001
Bacteroidota
Sphingobacterium sp. CFCC 11742 [LQXS]
900332
900247
-
Ser
TGA
[ENA]
¡û
>W1610867537
LQXS01000002
Bacteroidota
Sphingobacterium sp. CFCC 11742 [LQXS]
188437
188524
+
Ser
TGA
[ENA]
¡û
>W1710512298
FMZH01000007
Bacteroidota
Pedobacter soli [FMZH]
104077
103992
-
Ser
TGA
[ENA]
¡û
>W1710516038
FNCH01000001
Bacteroidota
Pedobacter terrae [FNCH]
608805
608890
+
Ser
TGA
[ENA]
¡û
>W1710516048
FNCH01000006
Bacteroidota
Pedobacter terrae [FNCH]
209920
210005
+
Ser
TGA
[ENA]
¡û
>W1710540837
FNXE01000006
Bacteroidota
Paenimyroides aquimaris marinum [FNXE]
15636
15549
-
Ser
TGA
[ENA]
¡û
>W1710540871
FNXE01000045
Bacteroidota
Paenimyroides aquimaris marinum [FNXE]
1494
1407
-
Ser
TGA
[ENA]
¡û
>W1710588428
FQZI01000003
Bacteroidota
Flavobacterium terrae [FQZI]
275928
275841
-
Ser
TGA
[ENA]
¡û
>W1710608348
FXAU01000003
Bacteroidota
Sphingobacterium psychroaquaticum [FXAU]
300368
300453
+
Ser
TGA
[ENA]
¡û
>W1710608349
FXAU01000003
Bacteroidota
Sphingobacterium psychroaquaticum [FXAU]
452099
452014
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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