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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.57145 (6 seq.)
>W1711700366
MSMP01000039
Bacteroidota
Tenacibaculum agarivorans HZ1 [MSMP]
33237
33324
+
Ser
TGA
[ENA]
¡û
>C181221004
LT899436
Bacteroidota
Tenacibaculum jejuense type strain: KCTC 22618 [LT899436]
3748400
3748485
+
Ser
TGA
-
¡û
>W2011615554
SJXJ01000005
Bacteroidota
Tenacibaculum sp. M341 [SJXJ]
100247
100162
-
Ser
TGA
[ENA]
¡û
>W2011623195
SLXM01000002
Bacteroidota
Tenacibaculum skagerrakense DSM 14836 [SLXM]
99729
99644
-
Ser
TGA
[ENA]
¡û
>W2110369780
JADPIB010000001
Bacteroidota
Aureivirga marina LMG 26721 [JADPIB]
223617
223532
-
Ser
TGA
[ENA]
¡û
>W2110369781
JADPIB010000002
Bacteroidota
Aureivirga marina LMG 26721 [JADPIB]
139171
139256
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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