tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.59830 (110 seq.)
>W1711125578 LUNK01000057 Gammaproteobacteria Alteromonas macleodii [LUNK] 1250 1164 - Leu CAA [ENA] ¡û
>W1711125612 LUNM01000151 Gammaproteobacteria Alteromonas macleodii [LUNM] 1224 1138 - Leu CAA [ENA] ¡û
>W131177997 ARLF01000001 Gammaproteobacteria Thiomicrorhabdus arctica DSM 13458 [ARLF] 1350137 1350223 + Leu CAA [ENA] ¡û
>W131186687 ARWI01000001 Gammaproteobacteria Thiomicrorhabdus sp. Kp2 Kp2 [ARWI] 885684 885770 + Leu CAA [ENA] ¡û
>W1711389187 MEJI01000117 Gammaproteobacteria Alteromonas abrolhosensis PEL 68C [MEJI] 12173 12259 + Leu CAA [ENA] ¡û
>W1711585460 MNZS01000054 Gammaproteobacteria Thiomicrospira sp. CG2_30_44_34 [MNZS] 21164 21078 - Leu CAA [ENA] ¡û
>W1711589005 MODU01000004 Gammaproteobacteria Alteromonas sp. V450 [MODU] 2475860 2475946 + Leu CAA [ENA] ¡û
>C171071512 CP018023 Gammaproteobacteria Alteromonas sp. Mex14 [CP018023] 3536535 3536621 + Leu CAA - ¡û
>C171071807 CP018031 Gammaproteobacteria Alteromonas sp. RW2A1 [CP018031] 3384711 3384797 + Leu CAA - ¡û
>WENV180109108 OAPJ01007913 [OAPJ] marine metagenome; ENVO 00002150 136 222 + Leu CAA [ENA] ¢þ
>WENV180689417 OCZA010893700 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 35 121 + Leu CAA [ENA] ¢þ
>W141242106 CAHY01000055 Gammaproteobacteria Alteromonas stellipolaris LMG 21856 [CAHY] 74225 74311 + Leu CAA [ENA] ¡û
>WENV182542423 OJAY01000903 [OJAY] seawater metagenome; Sea water 4170 4256 + Leu CAA [ENA] ¢þ
>WENV182543383 OJBB01000007 [OJBB] seawater metagenome; Sea water 87661 87747 + Leu CAA [ENA] ¢þ
>WENV182543657 OJBC01000106 [OJBC] seawater metagenome; Sea water 15978 16064 + Leu CAA [ENA] ¢þ
>WENV182547032 OJBR01000212 [OJBR] seawater metagenome; Sea water 15393 15479 + Leu CAA [ENA] ¢þ
>WENV182552501 OJCK01000954 [OJCK] seawater metagenome; Sea water 118 32 - Leu CAA [ENA] ¢þ
>WENV182553264 OJCR01001055 [OJCR] seawater metagenome; Sea water 1734 1820 + Leu CAA [ENA] ¢þ
>WENV182557153 OJDI01001350 [OJDI] seawater metagenome; Sea water 748 834 + Leu CAA [ENA] ¢þ
>WENV182557272 OJDI01003931 [OJDI] seawater metagenome; Sea water 2624 2538 - Leu CAA [ENA] ¢þ
>WENV182559301 OJDO01013038 [OJDO] seawater metagenome; Sea water 733 647 - Leu CAA [ENA] ¢þ
>WENV182562285 OJDZ01000431 [OJDZ] seawater metagenome; Sea water 11632 11546 - Leu CAA [ENA] ¢þ
>WENV182564867 OJEF01011466 [OJEF] seawater metagenome; Sea water 1132 1218 + Leu CAA [ENA] ¢þ
>WENV182566242 OJEJ01002799 [OJEJ] seawater metagenome; Sea water 522 436 - Leu CAA [ENA] ¢þ
>WENV182566710 OJEM01000614 [OJEM] seawater metagenome; Sea water 4848 4934 + Leu CAA [ENA] ¢þ
>WENV182567651 OJEP01000011 [OJEP] seawater metagenome; Sea water 81047 81133 + Leu CAA [ENA] ¢þ
>WENV182568746 OJEW01005627 [OJEW] seawater metagenome; Sea water 341 255 - Leu CAA [ENA] ¢þ
>WENV182571050 OJFG01000140 [OJFG] seawater metagenome; Sea water 16283 16369 + Leu CAA [ENA] ¢þ
>WENV182572049 OJFL01000174 [OJFL] seawater metagenome; Sea water 14009 14095 + Leu CAA [ENA] ¢þ
>WENV182572338 OJFL01003815 [OJFL] seawater metagenome; Sea water 2298 2212 - Leu CAA [ENA] ¢þ
>WENV182573179 OJFP01000290 [OJFP] seawater metagenome; Sea water 14009 14095 + Leu CAA [ENA] ¢þ
>WENV182574956 OJFS01011128 [OJFS] seawater metagenome; Sea water 87 1 - Leu CAA [ENA] ¢þ
>WENV182575007 OJFS01019681 [OJFS] seawater metagenome; Sea water 806 720 - Leu CAA [ENA] ¢þ
>WENV182577041 OJGC01000967 [OJGC] seawater metagenome; Sea water 3640 3726 + Leu CAA [ENA] ¢þ
>WENV182579446 OJGS01010408 [OJGS] seawater metagenome; Sea water 475 561 + Leu CAA [ENA] ¢þ
>WENV182581128 OJGX01000201 [OJGX] seawater metagenome; Sea water 5049 4963 - Leu CAA [ENA] ¢þ
>WENV182582790 OJHC01000113 [OJHC] seawater metagenome; Sea water 24661 24575 - Leu CAA [ENA] ¢þ
>WENV182584474 OJHG01000461 [OJHG] seawater metagenome; Sea water 118 32 - Leu CAA [ENA] ¢þ
>WENV182585745 OJHI01004346 [OJHI] seawater metagenome; Sea water 1110 1024 - Leu CAA [ENA] ¢þ
>WENV182586131 OJHJ01002805 [OJHJ] seawater metagenome; Sea water 1077 991 - Leu CAA [ENA] ¢þ
>WENV182586336 OJHK01000083 [OJHK] seawater metagenome; Sea water 29626 29540 - Leu CAA [ENA] ¢þ
>WENV182591017 OJIK01011946 [OJIK] seawater metagenome; Sea water 1122 1208 + Leu CAA [ENA] ¢þ
>WENV182592016 OJIO01044819 [OJIO] seawater metagenome; Sea water 509 423 - Leu CAA [ENA] ¢þ
>WENV183055301 OLGX01001579 [OLGX] seawater metagenome; Sea water 1193 1279 + Leu CAA [ENA] ¢þ
>WENV183057421 OLHL01001738 [OLHL] seawater metagenome; Sea water 6631 6717 + Leu CAA [ENA] ¢þ
>WENV183058064 OLHN01001967 [OLHN] seawater metagenome; Sea water 1601 1687 + Leu CAA [ENA] ¢þ
>WENV183060794 OLHY01005220 [OLHY] seawater metagenome; Sea water 323 237 - Leu CAA [ENA] ¢þ
>WENV183746790 PPCM01000008 [PPCM] marine sediment metagenome; marine sediment 156059 155973 - Leu CAA [ENA] ¢þ
>WENV170014741 AYSL01008401 [AYSL] marine sediment metagenome; marine sediment samples in the proximity of a phosphate-oil terminal 163 77 - Leu CAA [ENA] ¢þ
>WENV170014777 AYSL01010788 [AYSL] marine sediment metagenome; marine sediment samples in the proximity of a phosphate-oil terminal 305 219 - Leu CAA [ENA] ¢þ
>WENV170132275 CENT01054502 [CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 175 261 + Leu CAA [ENA] ¢þ
>WENV170162107 CEOM01003749 [CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 180 94 - Leu CAA [ENA] ¢þ
>WENV170162418 CEOM01028958 [CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 260 - Leu CAA [ENA] ¢þ
>WENV170279253 CERR01008503 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1333 1419 + Leu CAA [ENA] ¢þ
>WENV170298742 CESF01235643 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 287 373 + Leu CAA [ENA] ¢þ
>WENV170304352 CESI01036789 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3809 3723 - Leu CAA [ENA] ¢þ
>WENV170310587 CESM01052599 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 524 610 + Leu CAA [ENA] ¢þ
>WENV170321219 CESR01039240 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 359 445 + Leu CAA [ENA] ¢þ
>WENV170328491 CESV01018785 [CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14755 14669 - Leu CAA [ENA] ¢þ
>WENV170340840 CETC01039497 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 171 257 + Leu CAA [ENA] ¢þ
>WENV170341845 CETD01044778 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2180 2266 + Leu CAA [ENA] ¢þ
>WENV170343815 CETE01040869 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 12732 12818 + Leu CAA [ENA] ¢þ
>WENV170368305 CETQ01038377 [CETQ] marine metagenome genome assembly TARA_110_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1735 1821 + Leu CAA [ENA] ¢þ
>WENV170374497 CETT01093703 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3770 3684 - Leu CAA [ENA] ¢þ
>WENV170387729 CETZ01006363 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 846 932 + Leu CAA [ENA] ¢þ
>WENV170392544 CEUB01048775 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 198 112 - Leu CAA [ENA] ¢þ
>WENV170434509 CEUS01264914 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 564 478 - Leu CAA [ENA] ¢þ
>WENV170444121 CEUX01057400 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 171 257 + Leu CAA [ENA] ¢þ
>WENV170445589 CEUY01048751 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 639 725 + Leu CAA [ENA] ¢þ
>WENV170468509 CEVF01038811 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 638 724 + Leu CAA [ENA] ¢þ
>WENV170664084 JYMV01012689 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 215 301 + Leu CAA [ENA] ¢þ
>WENV170665952 JYMV01031820 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 10594 10508 - Leu CAA [ENA] ¢þ
>W141451808 JFBK01000001 Gammaproteobacteria Alteromonas sp. ALT199 [JFBK] 2983062 2983148 + Leu CAA [ENA] ¡û
>WENV170748243 LUMD01008746 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 179 265 + Leu CAA [ENA] ¢þ
>WENV170750217 LUMG01001256 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 1224 1138 - Leu CAA [ENA] ¢þ
>WENV170751139 LUMH01025579 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 179 265 + Leu CAA [ENA] ¢þ
>WENV170751971 LUMI01020418 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 578 664 + Leu CAA [ENA] ¢þ
>WENV170752262 LUMJ01000146 [LUMJ] marine metagenome; Red Sea water column Station 22 - depth 500m 1250 1164 - Leu CAA [ENA] ¢þ
>WENV170754421 LUML01007365 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 662 748 + Leu CAA [ENA] ¢þ
>WENV170754995 LUMM01008344 [LUMM] marine metagenome; Red Sea water column Station 22 - depth 50m 445 531 + Leu CAA [ENA] ¢þ
>WENV170823398 MDSY01056919 [MDSY] marine metagenome; seawater 47 133 + Leu CAA [ENA] ¢þ
>WENV170847569 MDTA01063561 [MDTA] marine metagenome; seawater 4874 4788 - Leu CAA [ENA] ¢þ
>WENV170891906 MDTD01030985 [MDTD] marine metagenome; seawater 23 109 + Leu CAA [ENA] ¢þ
>WENV170933110 MDTG01215505 [MDTG] marine metagenome; seawater 11369 11283 - Leu CAA [ENA] ¢þ
>WENV170940789 MDTG01349193 [MDTG] marine metagenome; seawater 7126 7040 - Leu CAA [ENA] ¢þ
>C181031498 CP018321 Gammaproteobacteria Alteromonas macleodii Te101 [CP018321] 3622506 3622592 + Leu CAA - ¡û
>C181113243 CP025115 Gammaproteobacteria Alteromonas sp. MB-3u-76 [CP025115] 3482253 3482339 + Leu CAA - ¡û
>C191083639 CP031967 Gammaproteobacteria Alteromonas sp. BL110 [CP031967] 2728405 2728319 - Leu CAA - ¡û
>W09107856 ABQB01000039 Gammaproteobacteria Alteromonas macleodii ATCC 27126 [ABQB] 1651 1565 - Leu CAA [ENA] ¡û
>W141733803 JNLD01000003 Gammaproteobacteria Thiomicrorhabdus sp. Milos-T2 Milos-T2 [JNLD] 125947 125861 - Leu CAA [ENA] ¡û
>W1910179914 BJKJ01000011 Gammaproteobacteria Alteromonas sp. KUL17 [BJKJ] 105122 105036 - Leu CAA [ENA] ¡û
>W1910179945 BJKK01000001 Gammaproteobacteria Alteromonas sp. KUL42 [BJKK] 7599 7513 - Leu CAA [ENA] ¡û
>W1810185537 PKGB01000009 Gammaproteobacteria Hydrogenovibrio sp. SC-1 [PKGB] 62794 62880 + Leu CAA [ENA] ¡û
>W1810357319 PVNO01000002 Gammaproteobacteria Alteromonas gracilis 9a2 [PVNO] 1467 1381 - Leu CAA [ENA] ¡û
>W1810658741 QJJN01000002 Gammaproteobacteria Alteromonas sp. I10 [QJJN] 153705 153619 - Leu CAA [ENA] ¡û
>C11100882 CP002339 Gammaproteobacteria Alteromonas naphthalenivorans SN2 [CP002339] 331154 331068 - Leu CAA [Ensembl] ¡û
>W1511483583 JWLX01000007 Gammaproteobacteria Alteromonas macleodii AD006 [JWLX] 162983 162897 - Leu CAA [ENA] ¡û
>W1511483678 JWLY01000034 Gammaproteobacteria Alteromonas macleodii AD037 [JWLY] 106200 106286 + Leu CAA [ENA] ¡û
>C161040556 CP012202 Gammaproteobacteria Alteromonas macleodii HOT1A3 [CP012202] 3612950 3613036 + Leu CAA - ¡û
>C161062235 CP013932 Gammaproteobacteria Alteromonas sp. Mac1 [CP013932] 3791750 3791836 + Leu CAA - ¡û
>C161062283 CP013933 Gammaproteobacteria Alteromonas sp. Mac2 [CP013933] 3767568 3767654 + Leu CAA - ¡û
>C161071051 CP014322 Gammaproteobacteria Alteromonas stellipolaris R10SW13 [CP014322] 3763038 3763124 + Leu CAA - ¡û
>C161086285 CP015345 Gammaproteobacteria Alteromonas stellipolaris PQQ-42 [CP015345] 2048763 2048677 - Leu CAA - ¡û
>C161086291 CP015346 Gammaproteobacteria Alteromonas stellipolaris PQQ-44 [CP015346] 1417226 1417312 + Leu CAA - ¡û
>C131007876 CP003841 Gammaproteobacteria Alteromonas macleodii ATCC 27126 [CP003841] 3528744 3528830 + Leu CAA [Ensembl] ¡û
>C131007931 CP003844 Gammaproteobacteria Alteromonas macleodii str. 'English Channel 673' [CP003844] 3609502 3609588 + Leu CAA [Ensembl] ¡û
>C131008006 CP003845 Gammaproteobacteria Alteromonas macleodii str. 'Black Sea 11' [CP003845] 3507360 3507446 + Leu CAA [Ensembl] ¡û
>C131008727 CP003873 Gammaproteobacteria Alteromonas macleodii str. 'Balearic Sea AD45' [CP003873] 3677803 3677889 + Leu CAA [Ensembl] ¡û
>W1610936511 LUNK01000057 Gammaproteobacteria Alteromonas macleodii [LUNK] 1250 1164 - Leu CAA [ENA] ¡û
>W1610936545 LUNM01000151 Gammaproteobacteria Alteromonas macleodii [LUNM] 1224 1138 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK