This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.65103 (93 seq.)
>W1711460329
MJED01000007
Bacillota
Enterococcus gallinarum [MJED]
173475
173390
-
Leu
CAA
[ENA]
¡û
>W1712069807
NGMQ01000001
Bacillota
Enterococcus gallinarum [NGMQ]
2182767
2182682
-
Leu
CAA
[ENA]
¡û
>WENV180453387
OBXM01000067
[OBXM] human gut metagenome; faeces
750
835
+
Leu
CAA
[ENA]
¡û
>WENV180497044
OCAE01000117
[OCAE] human gut metagenome; faeces
77423
77338
-
Leu
CAA
[ENA]
¡û
>W141072105
ASKG01000152
Bacillota
Enterococcus sp. HSIEG1 [ASKG]
28244
28159
-
Leu
CAA
[ENA]
¡û
>WENV182938186
OKVD01000755
[OKVD] human gut metagenome; human gut
6573
6658
+
Leu
CAA
[ENA]
¡û
>WENV182950260
OKVR01001437
[OKVR] human gut metagenome; human gut
2288
2373
+
Leu
CAA
[ENA]
¡û
>WENV182952060
OKVV01001697
[OKVV] human gut metagenome; human gut
306
391
+
Leu
CAA
[ENA]
¡û
>WENV170539883
CWGP01000089
[CWGP] human gut metagenome; ENVO:feces
1215
1300
+
Leu
CAA
[ENA]
¡û
>WENV170541160
CXPK01000372
[CXPK] human gut metagenome genome assembly hA2, contig hA2_contig001157.; ENVO:feces
1491
1576
+
Leu
CAA
[ENA]
¡û
>WENV170542711
CXQH01000550
[CXQH] human gut metagenome genome assembly hC3, contig hC3_contig001864.; ENVO:feces
3230
3145
-
Leu
CAA
[ENA]
¡û
>WENV170544473
CXRK01000410
[CXRK] human gut metagenome genome assembly hE7, contig hE7_contig003222.; ENVO:feces
3537
3452
-
Leu
CAA
[ENA]
¡û
>WENV170545217
CXRX01000095
[CXRX] human gut metagenome genome assembly hG12, contig; ENVO:feces
3394
3309
-
Leu
CAA
[ENA]
¡û
>WENV170545781
CXSH01002003
[CXSH] human gut metagenome genome assembly hG8, contig hG8_contig003709.; ENVO:feces
159
244
+
Leu
CAA
[ENA]
¡û
>WENV170548559
CXUI01001783
[CXUI] Human gut metagenome genome assembly, contig: mD1_contig003205.; ENVO:feces
384
299
-
Leu
CAA
[ENA]
¡û
>C191110800
CP033740
Bacillota
Enterococcus sp. FDAARGOS_553 [CP033740]
2029912
2029997
+
Leu
CAA
-
¡û
>C191177811
CP040461
Bacillota
Enterococcus sp. M190262 [CP040461]
2045304
2045389
+
Leu
CAA
-
¡û
>W09115414
ACAJ01000015
Bacillota
Enterococcus gallinarum EG2 [ACAJ]
1185
1270
+
Leu
CAA
[ENA]
¡û
>W141734587
JNLR01000003
Bacillota
Enterococcus gallinarum [JNLR]
2057789
2057704
-
Leu
CAA
[ENA]
¡û
>W1910609907
LERZ01000012
Bacillota
Enterococcus gallinarum 298EA1 [LERZ]
202525
202440
-
Leu
CAA
[ENA]
¡û
>W1911238655
NSCY01000002
Bacillota
Enterococcus gallinarum 9402 [NSCY]
1568
1653
+
Leu
CAA
[ENA]
¡û
>W1911710296
QPQX01000006
Bacillota
Enterococcus sp. ARL09-542 [QPQX]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W1810237756
PPHK01000002
Bacillota
Enterococcus gallinarum EG1 [PPHK]
2596
2681
+
Leu
CAA
[ENA]
¡û
>W1810907692
QVHY01000003
Bacillota
Enterococcus gallinarum OF05-6AC [QVHY]
362862
362777
-
Leu
CAA
[ENA]
¡û
>W2010149285
CAACXX010000002
Bacillota
Enterococcus saccharolyticus 3012STDY6252241 [CAACXX]
63216
63131
-
Leu
CAA
[ENA]
¡û
>W2010160255
CAAKOE010000088
Bacillota
Enterococcus gallinarum [CAAKOE]
1215
1300
+
Leu
CAA
[ENA]
¡û
>W2010165325
CABEIK010000001
Bacillota
Enterococcus gallinarum NCTC8736 [CABEIK]
1005262
1005347
+
Leu
CAA
[ENA]
¡û
>W2010195952
CABGIR010000002
Bacillota
Enterococcus gallinarum 4928STDY7071411 [CABGIR]
407039
406954
-
Leu
CAA
[ENA]
¡û
>W2010199674
CABGNS010000002
Bacillota
Enterococcus gallinarum 4928STDY7071418 [CABGNS]
407048
406963
-
Leu
CAA
[ENA]
¡û
>W2010203188
CABGTZ010000002
Bacillota
Enterococcus gallinarum 4928STDY7071615 [CABGTZ]
524660
524575
-
Leu
CAA
[ENA]
¡û
>W2010252637
CABIZP020000004
Bacillota
Enterococcus gallinarum [CABIZP]
474774
474689
-
Leu
CAA
[ENA]
¡û
>W2010446072
JAABOR010000002
Bacillota
Enterococcus gallinarum EGR748 [JAABOR]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2010608175
JABMDB010000014
Bacillota
Enterococcus gallinarum 57847415 [JABMDB]
97310
97225
-
Leu
CAA
[ENA]
¡û
>W2010644654
JABXHJ010000010
Bacillota
Enterococcus gallinarum EG6 [JABXHJ]
155132
155047
-
Leu
CAA
[ENA]
¡û
>W2010644702
JABXHK010000015
Bacillota
Enterococcus gallinarum EG5 [JABXHK]
154507
154422
-
Leu
CAA
[ENA]
¡û
>W2010644858
JABXJK010000060
Bacillota
Enterococcus gallinarum EG4 [JABXJK]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2010644901
JABXJL010000048
Bacillota
Enterococcus gallinarum EG3 [JABXJL]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2010644945
JABXJM010000045
Bacillota
Enterococcus gallinarum EG2 [JABXJM]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2010644988
JABXJN010000068
Bacillota
Enterococcus gallinarum EG1 [JABXJN]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2010667038
JACBYD010000038
Bacillota
Enterococcus gallinarum ENT [JACBYD]
132743
132658
-
Leu
CAA
[ENA]
¡û
>W2010770909
LERZ01000012
Bacillota
Enterococcus gallinarum 298EA1 [LERZ]
202525
202440
-
Leu
CAA
[ENA]
¡û
>W2011065628
NSCY01000002
Bacillota
Enterococcus gallinarum 9402 [NSCY]
1568
1653
+
Leu
CAA
[ENA]
¡û
>W2011284774
QPQX01000006
Bacillota
Enterococcus sp. ARL09-542 [QPQX]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2011342140
QYLR01000005
Bacillota
Enterococcus gallinarum N010.J-17 [QYLR]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2011342244
QYMQ01000002
Bacillota
Enterococcus gallinarum N018.G-3 [QYMQ]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2011343209
QYOK01000008
Bacillota
Enterococcus gallinarum T0181B.E-25 [QYOK]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2011452442
RKPB01000014
Bacillota
Enterococcus gallinarum P15 C A14 [RKPB]
1395
1480
+
Leu
CAA
[ENA]
¡û
>W2011452467
RKPF01000003
Bacillota
Enterococcus gallinarum P8 C A14 [RKPF]
283313
283228
-
Leu
CAA
[ENA]
¡û
>W2011452607
RKPO01000013
Bacillota
Enterococcus gallinarum P17 C A7 [RKPO]
61585
61500
-
Leu
CAA
[ENA]
¡û
>W2011452663
RKPQ01000013
Bacillota
Enterococcus gallinarum P16 C A7 [RKPQ]
61585
61500
-
Leu
CAA
[ENA]
¡û
>W2011452776
RKPX01000014
Bacillota
Enterococcus gallinarum P9 C A7 [RKPX]
1395
1480
+
Leu
CAA
[ENA]
¡û
>W2011671904
SPOW01000001
Bacillota
Enterococcus gallinarum C2 [SPOW]
1518
1603
+
Leu
CAA
[ENA]
¡û
>W2011822764
UFYU01000002
Bacillota
Enterococcus gallinarum NCTC12359 [UFYU]
1015619
1015704
+
Leu
CAA
[ENA]
¡û
>W2011822929
UFYW01000001
Bacillota
Enterococcus gallinarum NCTC12360 [UFYW]
1416429
1416344
-
Leu
CAA
[ENA]
¡û
>W2012124416
VRLO01000001
Bacillota
Enterococcus gallinarum S52016 [VRLO]
1698
1783
+
Leu
CAA
[ENA]
¡û
>W2012196429
VWOC01000005
Bacillota
Enterococcus gallinarum 25-4C [VWOC]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2012377749
WMHB01000001
Bacillota
Enterococcus gallinarum W17 [WMHB]
1517
1602
+
Leu
CAA
[ENA]
¡û
>W2012377811
WMHC01000003
Bacillota
Enterococcus gallinarum G12S [WMHC]
1315
1400
+
Leu
CAA
[ENA]
¡û
>W2012468523
WVTI01000001
Bacillota
Enterococcus gallinarum E3404 [WVTI]
470864
470779
-
Leu
CAA
[ENA]
¡û
>W2110121572
CAJSYR010000002
Bacillota
Enterococcus gallinarum [CAJSYR]
523862
523777
-
Leu
CAA
[ENA]
¡û
>W2110121916
CAJSZC010000003
Bacillota
Enterococcus gallinarum [CAJSZC]
1390
1475
+
Leu
CAA
[ENA]
¡û
>W2110158826
JAASJM010000031
Bacillota
Enterococcus gallinarum K55_2 [JAASJM]
205
120
-
Leu
CAA
[ENA]
¡û
>W2110223045
JACJKG010000015
Bacillota
Enterococcus gallinarum An774 [JACJKG]
82827
82742
-
Leu
CAA
[ENA]
¡û
>W2110316632
JADGKL010000038
Bacillota
Enterococcus gallinarum ENT.1 [JADGKL]
132743
132658
-
Leu
CAA
[ENA]
¡û
>W2110317600
JADGLH010000001
Bacillota
Enterococcus gallinarum 19428wB3_C2 [JADGLH]
1518
1603
+
Leu
CAA
[ENA]
¡û
>W2110354500
JADNKS010000001
Bacillota
Enterococcus gallinarum BSD2780061688_150302_F2 [JADNKS]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2110354955
JADNLH010000003
Bacillota
Enterococcus gallinarum BSD2780061688_150302_H8 [JADNLH]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2110355804
JADNMQ010000007
Bacillota
Enterococcus gallinarum 1001095H_141210_E7 [JADNMQ]
1324
1409
+
Leu
CAA
[ENA]
¡û
>W2110366818
JADPDT010000007
Bacillota
Enterococcus gallinarum BSD2780061687_150420_G3 [JADPDT]
188967
188882
-
Leu
CAA
[ENA]
¡û
>W2110369733
JADPHE010000002
Bacillota
Enterococcus gallinarum D52t1_170925_E8 [JADPHE]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W2110404363
JAEANO010000001
Bacillota
Enterococcus gallinarum QAU17 [JAEANO]
562271
562356
+
Leu
CAA
[ENA]
¡û
>W2110511074
JAFLJF010000001
Bacillota
Enterococcus gallinarum 74-1 [JAFLJF]
2130
2215
+
Leu
CAA
[ENA]
¡û
>W2110620624
JAHLOT010000004
Bacillota
Enterococcus gallinarum N13 [JAHLOT]
308743
308658
-
Leu
CAA
[ENA]
¡û
>C211083613
CP050485
Bacillota
Enterococcus gallinarum EGM181 [CP050485]
1248572
1248657
+
Leu
CAA
-
¡û
>W2110728843
JAJCLL010000018
Bacillota
Enterococcus gallinarum DFI.7.69 [JAJCLL]
1312
1397
+
Leu
CAA
[ENA]
¡û
>C231061431
CP050816
Bacillota
Enterococcus gallinarum EG81 [CP050816]
1538453
1538538
+
Leu
CAA
-
¡û
>C231161450
CP078505
Bacillota
Enterococcus gallinarum fecal_iso1 [CP078505]
1064650
1064735
+
Leu
CAA
-
¡û
>C231292454
CP091204
Bacillota
Enterococcus gallinarum 674 [CP091204]
1003340
1003425
+
Leu
CAA
-
¡û
>W2110768378
SIYA01000018
Bacillota
Enterococcus gallinarum 2CIL2 [SIYA]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2110768449
SIYE01000021
Bacillota
Enterococcus gallinarum 2SIJ202 [SIYE]
53085
53000
-
Leu
CAA
[ENA]
¡û
>W2110768500
SIYL01000011
Bacillota
Enterococcus gallinarum 2UPA1 [SIYL]
1206
1291
+
Leu
CAA
[ENA]
¡û
>W2110768651
SIYT01000008
Bacillota
Enterococcus gallinarum 3CPD4 [SIYT]
1204
1289
+
Leu
CAA
[ENA]
¡û
>W2110768703
SIYV01000011
Bacillota
Enterococcus gallinarum 3CPL1 [SIYV]
1205
1290
+
Leu
CAA
[ENA]
¡û
>W2110768757
SIYW01000017
Bacillota
Enterococcus gallinarum 3CPL4 [SIYW]
1450
1535
+
Leu
CAA
[ENA]
¡û
>W2110769162
SJOK01000016
Bacillota
Enterococcus gallinarum 2SIJ201 [SJOK]
1185
1270
+
Leu
CAA
[ENA]
¡û
>W2110777152
VRYP01000011
Bacillota
Enterococcus gallinarum 6-8 [VRYP]
1283
1368
+
Leu
CAA
[ENA]
¡û
>C241107403
CP046307
Bacillota
Enterococcus gallinarum FDAARGOS_728 [CP046307]
155739
155824
+
Leu
CAA
-
¡û
>W2110801048
WSZL01000004
Bacillota
Enterococcus gallinarum EG81 [WSZL]
386478
386393
-
Leu
CAA
[ENA]
¡û
>W1511187722
JMGP01000002
Bacillota
Enterococcus gallinarum A6981 [JMGP]
1346
1431
+
Leu
CAA
[ENA]
¡û
>W121001867
ADLY01000038
Bacillota
Enterococcus saccharolyticus 30_1 [ADLY]
1691
1776
+
Leu
CAA
[ENA]
¡û
>W1610066953
BCQE01000017
Bacillota
Enterococcus gallinarum NBRC 100675 [BCQE]
87969
87884
-
Leu
CAA
[ENA]
¡û
>W1710064384
BCQE01000017
Bacillota
Enterococcus gallinarum NBRC 100675 [BCQE]
87969
87884
-
Leu
CAA
[ENA]
¡û
>W1710659393
JXKP01000013
Bacillota
Enterococcus gallinarum [JXKP]
153
238
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK