This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.65265 (6 seq.)
>W1711333313
MBPP01000001
Gammaproteobacteria
Marinobacter sp. AC-23 [MBPP]
161476
161562
+
Leu
TAA
[ENA]
¡û
>WENV170673680
LAZR01022541
[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
21
107
+
Leu
TAA
[ENA]
¡û
>W1910923742
NIHD01000006
Gammaproteobacteria
Marinobacter aromaticivorans D15-8P [NIHD]
180974
181060
+
Leu
TAA
[ENA]
¡û
>W1810173510
PJNC01000001
Gammaproteobacteria
Marinobacter sp. LV10R510-8 [PJNC]
3295076
3295162
+
Leu
TAA
[ENA]
¡û
>W2010970263
NIHD01000006
Gammaproteobacteria
Marinobacter aromaticivorans D15-8P [NIHD]
180974
181060
+
Leu
TAA
[ENA]
¡û
>W2110021284
BMEJ01000005
Actinomycetota
Streptosporangium jomthongense CGMCC 1.11045 [BMEJ]
180982
181068
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK