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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.659884 (4 seq.)
>W1711713329
MTCZ01000006
Bacteroidota
Flavobacterium davisii columnare [MTCZ]
46966
47041
+
Arg
CCG
[ENA]
¡û
>W1911533971
OLKH01000055
Bacteroidota
Flavobacterium columnare [OLKH]
65166
65239
+
Arg
CCG
[ENA]
¡û
>W2011166728
OLKH01000055
Bacteroidota
Flavobacterium columnare [OLKH]
65166
65239
+
Arg
CCG
[ENA]
¡û
>W2011479777
RQSM01000003
Bacteroidota
Flavobacterium columnare ARS1 [RQSM]
1992035
1992108
+
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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