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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.663157 (6 seq.)
>C191123429
CP034346
Bacillota
Paenibacillus lutimineralis MBLB1234 [CP034346]
152362
152437
+
Ala
TGC
-
¡û
>C191123488
CP034346
Bacillota
Paenibacillus lutimineralis MBLB1234 [CP034346]
5452885
5452810
-
Ala
TGC
-
¡û
>W2010741113
JACJIP010000086
Bacillota
Fontibacillus solani CECT 8693 [JACJIP]
452
527
+
Ala
TGC
[ENA]
¡û
>C241310752
CP133605
Bacillota
Paenibacillus sp. D2_2 [CP133605]
66008
66083
+
Ala
TGC
-
¡û
>C241310795
CP133605
Bacillota
Paenibacillus sp. D2_2 [CP133605]
5063166
5063091
-
Ala
TGC
-
¡û
>C241310808
CP133605
Bacillota
Paenibacillus sp. D2_2 [CP133605]
4749543
4749468
-
Ala
TGC
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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