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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.663168 (5 seq.)
>W2011760813
UASY01000012
Gammaproteobacteria
Morganella morganii NCTC12289 [UASY]
219827
219752
-
Val
TAC
[ENA]
¡û
>W2110001166
AAXVKJ010000007
Gammaproteobacteria
Morganella morganii IFSH00433 [AAXVKJ]
108412
108487
+
Val
TAC
[ENA]
¡û
>W2110001167
AAXVKJ010000007
Gammaproteobacteria
Morganella morganii IFSH00433 [AAXVKJ]
108543
108618
+
Val
TAC
[ENA]
¡û
>W2110001168
AAXVKJ010000007
Gammaproteobacteria
Morganella morganii IFSH00433 [AAXVKJ]
108656
108731
+
Val
TAC
[ENA]
¡û
>W2110773945
VKKS01000001
Gammaproteobacteria
Morganella morganii Mm1 [VKKS]
778992
779067
+
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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