This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.67023 (14 seq.)
>C181143164
CP026847
Bacillota
Weissella koreensis WiKim0080 [CP026847]
1136373
1136459
+
Leu
AAG
-
¡û
>C191013642
CP017326
Bacillota
Weissella soli KACC 11848 [CP017326]
1304690
1304605
-
Leu
AAG
-
¡û
>W1810784498
QRAS01000003
Bacillota
Weissella soli CECT 7031 [QRAS]
173792
173877
+
Leu
AAG
[ENA]
¡û
>W2010104410
BJYO01000004
Bacillota
Weissella soli NBRC 106074 [BJYO]
77924
77839
-
Leu
AAG
[ENA]
¡û
>W2010581019
JAAXPL010000002
Bacillota
Weissella soli CCUG 46608 [JAAXPL]
78052
77967
-
Leu
AAG
[ENA]
¡û
>C211059778
CP043431
Bacillota
Weissella koreensis SK [CP043431]
1095024
1095110
+
Leu
AAG
-
¡û
>C211137951
CP060724
Bacillota
Weissella diestrammenae KACC 16890 [CP060724]
397301
397218
-
Leu
AAG
-
¡û
>C241138632
CP049888
Bacillota
Weissella coleopterorum HDW19 [CP049888]
1373353
1373267
-
Leu
AAG
-
¡û
>C241378279
CP144279
Bacillota
Weissella koreensis DMW12 [CP144279]
1114356
1114442
+
Leu
AAG
-
¡û
>WENV11100292
AEKF01000024
Food metagenome, Jonggazip commercial cabbage kimchi
8246
8160
-
Leu
AAG
[ENA]
¡û
>C11123748
CP002899
Bacillota
Weissella koreensis KACC 15510 [CP002899]
1058182
1058269
+
Leu
AAG
[Ensembl]
¡û
>W121082015
AKGG01000005
Bacillota
Weissella koreensis KCTC 3621 [AKGG]
130122
130208
+
Leu
AAG
[ENA]
¡û
>W1610528840
JQBP01000002
Bacillota
Weissella kandleri [JQBP]
229982
230069
+
Leu
AAG
[ENA]
¡û
>W1710630430
JQBP01000002
Bacillota
Weissella kandleri [JQBP]
229982
230069
+
Leu
AAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK