This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.671343 (25 seq.)
>WENV170657896
JTFP01031467
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
511
437
-
Asn
GTT
[ENA]
¢þ
>WENV170657897
JTFP01031467
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
403
329
-
Asn
GTT
[ENA]
¢þ
>WENV170657898
JTFP01031467
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
291
217
-
Asn
GTT
[ENA]
¢þ
>C191084452
CP032097
Campylobacterota
Arcobacter ellisii LMG 26155 [CP032097]
2146561
2146487
-
Asn
GTT
-
¡û
>C191084453
CP032097
Campylobacterota
Arcobacter ellisii LMG 26155 [CP032097]
2146453
2146379
-
Asn
GTT
-
¡û
>C191084454
CP032097
Campylobacterota
Arcobacter ellisii LMG 26155 [CP032097]
2146341
2146267
-
Asn
GTT
-
¡û
>W1911426339
NXIG01000010
Campylobacterota
Arcobacter ellisii CECT 7837 [NXIG]
1850
1776
-
Asn
GTT
[ENA]
¡û
>W1911426340
NXIG01000010
Campylobacterota
Arcobacter ellisii CECT 7837 [NXIG]
1742
1668
-
Asn
GTT
[ENA]
¡û
>W1911426341
NXIG01000010
Campylobacterota
Arcobacter ellisii CECT 7837 [NXIG]
1630
1556
-
Asn
GTT
[ENA]
¡û
>W1911426382
NXIH01000013
Campylobacterota
Arcobacter defluvii CECT 7697 [NXIH]
97882
97956
+
Asn
GTT
[ENA]
¡û
>W1911426383
NXIH01000013
Campylobacterota
Arcobacter defluvii CECT 7697 [NXIH]
97990
98064
+
Asn
GTT
[ENA]
¡û
>W1911426384
NXIH01000013
Campylobacterota
Arcobacter defluvii CECT 7697 [NXIH]
98104
98178
+
Asn
GTT
[ENA]
¡û
>W1911426385
NXIH01000013
Campylobacterota
Arcobacter defluvii CECT 7697 [NXIH]
98218
98292
+
Asn
GTT
[ENA]
¡û
>W1911426438
NXII01000023
Campylobacterota
Arcobacter cloacae CECT 7834 [NXII]
948
874
-
Asn
GTT
[ENA]
¡û
>W1911426439
NXII01000023
Campylobacterota
Arcobacter cloacae CECT 7834 [NXII]
839
765
-
Asn
GTT
[ENA]
¡û
>W1911426440
NXII01000023
Campylobacterota
Arcobacter cloacae CECT 7834 [NXII]
728
654
-
Asn
GTT
[ENA]
¡û
>W1911426493
NXIJ01000034
Campylobacterota
Arcobacter aquimarinus CECT 8442 [NXIJ]
791
717
-
Asn
GTT
[ENA]
¡û
>W1911426494
NXIJ01000034
Campylobacterota
Arcobacter aquimarinus CECT 8442 [NXIJ]
683
609
-
Asn
GTT
[ENA]
¡û
>W1911426495
NXIJ01000034
Campylobacterota
Arcobacter aquimarinus CECT 8442 [NXIJ]
570
496
-
Asn
GTT
[ENA]
¡û
>W1911576426
PDJZ01000019
Campylobacterota
Arcobacter cloacae F26 [PDJZ]
22738
22812
+
Asn
GTT
[ENA]
¡û
>W1911576427
PDJZ01000019
Campylobacterota
Arcobacter cloacae F26 [PDJZ]
22847
22921
+
Asn
GTT
[ENA]
¡û
>W1911576428
PDJZ01000019
Campylobacterota
Arcobacter cloacae F26 [PDJZ]
22955
23029
+
Asn
GTT
[ENA]
¡û
>C11101072
AP012048
Campylobacterota
Arcobacter sp. L [AP012048]
2342459
2342385
-
Asn
GTT
[Ensembl]
¡û
>C11101073
AP012048
Campylobacterota
Arcobacter sp. L [AP012048]
2342351
2342277
-
Asn
GTT
[Ensembl]
¡û
>C11101074
AP012048
Campylobacterota
Arcobacter sp. L [AP012048]
2342237
2342163
-
Asn
GTT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK