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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.671377 (8 seq.)
>W1910723925
MGJL01000008
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_45_42 [MGJL]
606
681
+
Lys
TTT
[ENA]
¡û
>W1910724344
MGJY01000004
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_46_19 [MGJY]
605
680
+
Lys
TTT
[ENA]
¡û
>W1910724809
MGKN01000010
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_45_72 [MGKN]
2136
2211
+
Lys
TTT
[ENA]
¡û
>W1910725088
MGKV01000020
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_45_18 [MGKV]
8173
8248
+
Lys
TTT
[ENA]
¡û
>W2010857352
MGJL01000008
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_45_42 [MGJL]
606
681
+
Lys
TTT
[ENA]
¡û
>W2010857771
MGJY01000004
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_46_19 [MGJY]
605
680
+
Lys
TTT
[ENA]
¡û
>W2010858236
MGKN01000010
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_45_72 [MGKN]
2136
2211
+
Lys
TTT
[ENA]
¡û
>W2010858515
MGKV01000020
Unclassified
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_45_18 [MGKV]
8173
8248
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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