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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.673293 (10 seq.)
>WENV180660931
OCVV010975875
[OCVV] gut metagenome; gut
3960
4035
+
Lys
CTT
[ENA]
¡û
>WENV180660932
OCVV010975875
[OCVV] gut metagenome; gut
3960
4035
+
Lys
CTT
[ENA]
¡û
>WENV180665077
OCVV011177788
[OCVV] gut metagenome; gut
1772
1697
-
Lys
CTT
[ENA]
¡û
>WENV180665078
OCVV011177788
[OCVV] gut metagenome; gut
1681
1606
-
Lys
CTT
[ENA]
¡û
>WENV180665079
OCVV011177788
[OCVV] gut metagenome; gut
1772
1697
-
Lys
CTT
[ENA]
¡û
>WENV180665080
OCVV011177788
[OCVV] gut metagenome; gut
1681
1606
-
Lys
CTT
[ENA]
¡û
>WENV180669703
OCVV011286097
[OCVV] gut metagenome; gut
1297
1222
-
Lys
CTT
[ENA]
¡û
>WENV180669704
OCVV011286097
[OCVV] gut metagenome; gut
1297
1222
-
Lys
CTT
[ENA]
¡û
>WENV180674447
OCVV011351488
[OCVV] gut metagenome; gut
81
6
-
Lys
CTT
[ENA]
¡û
>WENV180674448
OCVV011351488
[OCVV] gut metagenome; gut
81
6
-
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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