This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.68881 (57 seq.)
>WENV180697999
ODDE01018798
[ODDE] human metagenome; G_DNA_Supragingival plaque
85
1
-
Leu
CAA
[ENA]
¡û
>WENV180732074
ODGW01105037
[ODGW] human metagenome; G_DNA_Supragingival plaque
112
196
+
Leu
CAA
[ENA]
¡û
>WENV180734007
ODGZ01001922
[ODGZ] human metagenome; G_DNA_Supragingival plaque
1682
1766
+
Leu
CAA
[ENA]
¡û
>WENV180751651
ODHS01096142
[ODHS] human metagenome; G_DNA_Supragingival plaque
399
315
-
Leu
CAA
[ENA]
¡û
>WENV180781803
ODIP01004238
[ODIP] human metagenome; G_DNA_Supragingival plaque
96
12
-
Leu
CAA
[ENA]
¡û
>WENV180787763
ODIS01014321
[ODIS] human metagenome; G_DNA_Supragingival plaque
347
431
+
Leu
CAA
[ENA]
¡û
>WENV180796712
ODJB01010377
[ODJB] human metagenome; G_DNA_Supragingival plaque
1690
1774
+
Leu
CAA
[ENA]
¡û
>WENV180801478
ODJD01038095
[ODJD] human metagenome; G_DNA_Supragingival plaque
642
726
+
Leu
CAA
[ENA]
¡û
>WENV180804898
ODJG01020364
[ODJG] human metagenome; G_DNA_Supragingival plaque
122
38
-
Leu
CAA
[ENA]
¡û
>WENV180823488
ODJW01039363
[ODJW] human metagenome; G_DNA_Supragingival plaque
582
498
-
Leu
CAA
[ENA]
¡û
>WENV180824322
ODJX01003225
[ODJX] human metagenome; G_DNA_Supragingival plaque
1682
1598
-
Leu
CAA
[ENA]
¡û
>WENV180833318
ODKC01029450
[ODKC] human metagenome; G_DNA_Supragingival plaque
817
901
+
Leu
CAA
[ENA]
¡û
>WENV180834750
ODKD01157908
[ODKD] human metagenome; G_DNA_Supragingival plaque
84
168
+
Leu
CAA
[ENA]
¡û
>WENV180836023
ODKE01030817
[ODKE] human metagenome; G_DNA_Supragingival plaque
93
9
-
Leu
CAA
[ENA]
¡û
>WENV180844527
ODKN01171256
[ODKN] human metagenome; G_DNA_Supragingival plaque
105
21
-
Leu
CAA
[ENA]
¡û
>WENV180848021
ODKT01354093
[ODKT] human metagenome; G_DNA_Supragingival plaque
107
23
-
Leu
CAA
[ENA]
¡û
>WENV180859355
ODLD01000466
[ODLD] human metagenome; G_DNA_Supragingival plaque
18632
18548
-
Leu
CAA
[ENA]
¡û
>WENV180889095
ODMN01012283
[ODMN] human metagenome; G_DNA_Supragingival plaque
1316
1400
+
Leu
CAA
[ENA]
¡û
>WENV180922728
ODTJ01009384
[ODTJ] human metagenome; G_DNA_Supragingival plaque
1830
1746
-
Leu
CAA
[ENA]
¡û
>WENV180924213
ODTK01001908
[ODTK] human metagenome; G_DNA_Supragingival plaque
3129
3213
+
Leu
CAA
[ENA]
¡û
>WENV180938631
ODTX01004378
[ODTX] human metagenome; G_DNA_Supragingival plaque
913
829
-
Leu
CAA
[ENA]
¡û
>WENV180945461
ODUC01163463
[ODUC] human metagenome; G_DNA_Supragingival plaque
102
18
-
Leu
CAA
[ENA]
¡û
>WENV180973258
ODUW01002633
[ODUW] human metagenome; G_DNA_Supragingival plaque
173
257
+
Leu
CAA
[ENA]
¡û
>WENV180980603
ODVE01000709
[ODVE] human metagenome; G_DNA_Supragingival plaque
12318
12402
+
Leu
CAA
[ENA]
¡û
>WENV180982574
ODVF01000118
[ODVF] human metagenome; G_DNA_Supragingival plaque
41010
40926
-
Leu
CAA
[ENA]
¡û
>WENV180987656
ODVK01065315
[ODVK] human metagenome; G_DNA_Supragingival plaque
119
35
-
Leu
CAA
[ENA]
¡û
>WENV180999737
ODVT01056833
[ODVT] human metagenome; G_DNA_Buccal mucosa
189
273
+
Leu
CAA
[ENA]
¡û
>WENV181002115
ODVX01000024
[ODVX] human metagenome; G_DNA_Supragingival plaque
86447
86531
+
Leu
CAA
[ENA]
¡û
>WENV181008890
ODWE01018298
[ODWE] human metagenome; G_DNA_Supragingival plaque
487
403
-
Leu
CAA
[ENA]
¡û
>WENV181012765
ODWK01015364
[ODWK] human metagenome; G_DNA_Supragingival plaque
607
691
+
Leu
CAA
[ENA]
¡û
>WENV181030001
ODXF01016912
[ODXF] human metagenome; G_DNA_Supragingival plaque
245
161
-
Leu
CAA
[ENA]
¡û
>WENV181050013
ODYD01004577
[ODYD] human metagenome; G_DNA_Supragingival plaque
2741
2825
+
Leu
CAA
[ENA]
¡û
>WENV181063786
ODYP01003610
[ODYP] human metagenome; G_DNA_Supragingival plaque
5587
5503
-
Leu
CAA
[ENA]
¡û
>WENV181067462
ODZI01020009
[ODZI] human metagenome; G_DNA_Supragingival plaque
911
827
-
Leu
CAA
[ENA]
¡û
>WENV181068150
ODZI01140847
[ODZI] human metagenome; G_DNA_Supragingival plaque
89
5
-
Leu
CAA
[ENA]
¡û
>WENV181070547
OEAE01003156
[OEAE] human metagenome; G_DNA_Supragingival plaque
5201
5117
-
Leu
CAA
[ENA]
¡û
>WENV181078876
OEAS01000882
[OEAS] human metagenome; G_DNA_Supragingival plaque
2980
2896
-
Leu
CAA
[ENA]
¡û
>WENV181083520
OEAV01009858
[OEAV] human metagenome; G_DNA_Supragingival plaque
220
136
-
Leu
CAA
[ENA]
¡û
>WENV181121880
OEFL01026995
[OEFL] human metagenome; G_DNA_Supragingival plaque
102
18
-
Leu
CAA
[ENA]
¡û
>WENV181137803
OEGJ01028552
[OEGJ] human metagenome; G_DNA_Supragingival plaque
893
977
+
Leu
CAA
[ENA]
¡û
>WENV181146555
OEHQ01009506
[OEHQ] human metagenome; G_DNA_Supragingival plaque
826
910
+
Leu
CAA
[ENA]
¡û
>WENV181152652
OEIA01003744
[OEIA] human metagenome; G_DNA_Supragingival plaque
6099
6183
+
Leu
CAA
[ENA]
¡û
>WENV181156743
OEIE01085938
[OEIE] human metagenome; G_DNA_Supragingival plaque
98
14
-
Leu
CAA
[ENA]
¡û
>WENV181160913
OEIK01059597
[OEIK] human metagenome; G_DNA_Supragingival plaque
92
8
-
Leu
CAA
[ENA]
¡û
>WENV181179137
OEJT01001532
[OEJT] human metagenome; G_DNA_Supragingival plaque
5236
5152
-
Leu
CAA
[ENA]
¡û
>WENV181181505
OEJU01100903
[OEJU] human metagenome; G_DNA_Supragingival plaque
105
189
+
Leu
CAA
[ENA]
¡û
>WENV181181635
OEJV01000030
[OEJV] human metagenome; G_DNA_Supragingival plaque
103303
103219
-
Leu
CAA
[ENA]
¡û
>C191173833
CP040007
Actinomycetota
Arachnia propionica F0700 [CP040007]
2069530
2069614
+
Leu
CAA
-
¡û
>C191210848
LR134406
Actinomycetota
Arachnia propionica NCTC12967 [LR134406]
2065041
2065125
+
Leu
CAA
-
¡û
>C191214563
LR134535
Actinomycetota
Arachnia propionica NCTC11666 [LR134535]
2059827
2059911
+
Leu
CAA
-
¡û
>W2011451026
RKKA01000001
Actinomycetota
Pseudopropionibacterium propionicum FDAARGOS_578 [RKKA]
3281045
3280961
-
Leu
CAA
[ENA]
¡û
>W2011951767
UWTZ01000015
Actinomycetota
Pseudopropionibacterium sp. Marseille-P6184 [UWTZ]
244499
244415
-
Leu
CAA
[ENA]
¡û
>C211307393
CP072385
Actinomycetota
Arachnia propionica F0714 [CP072385]
1389087
1389003
-
Leu
CAA
-
¡û
>C211307412
CP072386
Actinomycetota
Arachnia propionica F0231 [CP072386]
2034097
2034181
+
Leu
CAA
-
¡û
>C121002940
CP002734
Actinomycetota
Arachnia propionica F0230a [CP002734]
2081869
2081953
+
Leu
CAA
[Ensembl]
¡û
>W1610074482
BCWS01000001
Actinomycetota
Arachnia propionica NBRC 14587 [BCWS]
127972
127886
-
Leu
CAA
[ENA]
¡û
>W1710071600
BCWS01000001
Actinomycetota
Arachnia propionica NBRC 14587 [BCWS]
127972
127886
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK