This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.69443 (9 seq.)
>C181143170
CP026847
Bacillota
Weissella koreensis WiKim0080 [CP026847]
1250905
1250990
+
Leu
TAA
-
¡û
>C211059784
CP043431
Bacillota
Weissella koreensis SK [CP043431]
1209556
1209641
+
Leu
TAA
-
¡û
>C241138638
CP049888
Bacillota
Weissella coleopterorum HDW19 [CP049888]
1263290
1263205
-
Leu
TAA
-
¡û
>C241378285
CP144279
Bacillota
Weissella koreensis DMW12 [CP144279]
1228889
1228974
+
Leu
TAA
-
¡û
>WENV11100343
AEKF01000096
Food metagenome, Jonggazip commercial cabbage kimchi
452
537
+
Leu
TAA
[ENA]
¡û
>C11123754
CP002899
Bacillota
Weissella koreensis KACC 15510 [CP002899]
1173512
1173597
+
Leu
TAA
[Ensembl]
¡û
>W121082021
AKGG01000005
Bacillota
Weissella koreensis KCTC 3621 [AKGG]
244653
244738
+
Leu
TAA
[ENA]
¡û
>W1610528846
JQBP01000003
Bacillota
Weissella kandleri [JQBP]
286057
285974
-
Leu
TAA
[ENA]
¡û
>W1710630436
JQBP01000003
Bacillota
Weissella kandleri [JQBP]
286057
285974
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK