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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.70457 (6 seq.)
>WENV180870476
ODLN01002201
[ODLN] human metagenome; G_DNA_Stool
7313
7227
-
Leu
CAG
[ENA]
¡û
>WENV180963401
ODUN01153025
[ODUN] human metagenome; G_DNA_Stool
208
122
-
Leu
CAG
[ENA]
¡û
>WENV182029641
OHCQ01013077
[OHCQ] human gut metagenome; feces
180
266
+
Leu
CAG
[ENA]
¡û
>WENV182148976
OHLF01020727
[OHLF] human gut metagenome; feces
848
934
+
Leu
CAG
[ENA]
¡û
>WENV182651328
OJMH01001436
[OJMH] human gut metagenome; feces
7624
7710
+
Leu
CAG
[ENA]
¡û
>WENV183395481
OLZH01021851
[OLZH] human gut metagenome; feces
914
828
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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