This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.732490 (260 seq.)
>W1710811718
LKIT01000002
Gammaproteobacteria
Xanthomonas sp. Mitacek01 [LKIT]
96808
96882
+
Gln
CTG
[ENA]
¡û
>W1710863671
LMFH01000008
Gammaproteobacteria
Lysobacter sp. Root494 [LMFH]
278501
278427
-
Gln
CTG
[ENA]
¡û
>W1710864835
LMGE01000016
Gammaproteobacteria
Lysobacter sp. Root559 [LMGE]
137697
137623
-
Gln
CTG
[ENA]
¡û
>W1710865506
LMGS01000009
Gammaproteobacteria
Lysobacter sp. Root604 [LMGS]
1193685
1193759
+
Gln
CTG
[ENA]
¡û
>W1710865785
LMGY01000012
Gammaproteobacteria
Pseudoxanthomonas sp. Root630 [LMGY]
552429
552503
+
Gln
CTG
[ENA]
¡û
>W1710865874
LMHA01000001
Gammaproteobacteria
Pseudoxanthomonas sp. Root65 [LMHA]
577325
577251
-
Gln
CTG
[ENA]
¡û
>W1710866100
LMHF01000009
Gammaproteobacteria
Lysobacter sp. Root667 [LMHF]
145522
145596
+
Gln
CTG
[ENA]
¡û
>W1710866448
LMHM01000001
Gammaproteobacteria
Lysobacter sp. Root690 [LMHM]
262219
262145
-
Gln
CTG
[ENA]
¡û
>W1710867597
LMIK01000005
Gammaproteobacteria
Lysobacter sp. Root76 [LMIK]
882696
882770
+
Gln
CTG
[ENA]
¡û
>W1710868624
LMJF01000012
Gammaproteobacteria
Lysobacter sp. Root916 [LMJF]
83262
83336
+
Gln
CTG
[ENA]
¡û
>W1710868940
LMJN01000001
Gammaproteobacteria
Lysobacter sp. Root96 [LMJN]
697891
697965
+
Gln
CTG
[ENA]
¡û
>W1710869006
LMJO01000012
Gammaproteobacteria
Lysobacter sp. Root983 [LMJO]
728993
729067
+
Gln
CTG
[ENA]
¡û
>W1710880577
LMSK01000002
Gammaproteobacteria
Rhodanobacter sp. Soil772 [LMSK]
368757
368683
-
Gln
CTG
[ENA]
¡û
>W1711073097
LSIF01000095
Gammaproteobacteria
Pseudoxanthomonas mexicana [LSIF]
11743
11817
+
Gln
CTG
[ENA]
¡û
>W1711147370
LVJP01001113
Gammaproteobacteria
Rhodanobacter denitrificans [LVJP]
9
83
+
Gln
CTG
[ENA]
¡û
>W1711147420
LVJQ01000495
Gammaproteobacteria
Rhodanobacter sp. FW104-R5 [LVJQ]
192
118
-
Gln
CTG
[ENA]
¡û
>W1711147453
LVJQ01002515
Gammaproteobacteria
Rhodanobacter sp. FW104-R5 [LVJQ]
543
617
+
Gln
CTG
[ENA]
¡û
>W1711147474
LVJR01000005
Gammaproteobacteria
Rhodanobacter sp. FW104-R8 [LVJR]
53994
53920
-
Gln
CTG
[ENA]
¡û
>W1711147523
LVJS01000027
Gammaproteobacteria
Rhodanobacter thiooxydans [LVJS]
53318
53392
+
Gln
CTG
[ENA]
¡û
>W1711147572
LVJT01000013
Gammaproteobacteria
Rhodanobacter sp. FW510-T8 [LVJT]
89489
89563
+
Gln
CTG
[ENA]
¡û
>W1711147617
LVJU01000012
Gammaproteobacteria
Rhodanobacter sp. FW510-R10 [LVJU]
48487
48561
+
Gln
CTG
[ENA]
¡û
>W1711147709
LVJV01001861
Gammaproteobacteria
Rhodanobacter sp. FW510-R12 [LVJV]
2837
2763
-
Gln
CTG
[ENA]
¡û
>W1711147710
LVJV01001879
Gammaproteobacteria
Rhodanobacter sp. FW510-R12 [LVJV]
2783
2709
-
Gln
CTG
[ENA]
¡û
>W1711386242
MEFB01000027
Gammaproteobacteria
Rhodanobacter sp. SCN 67-45 [MEFB]
31777
31851
+
Gln
CTG
[ENA]
¡û
>W1711424131
MIDU01000217
Gammaproteobacteria
Xanthomonadales bacterium RIFOXYA1_FULL_68_6 [MIDU]
1198
1124
-
Gln
CTG
[ENA]
¡û
>W1711503667
MKTU01000047
Gammaproteobacteria
Rhodanobacter sp. 67-28 [MKTU]
14600
14674
+
Gln
CTG
[ENA]
¡û
>W1711506748
MKWR01000004
Gammaproteobacteria
Xanthomonadales bacterium 63-13 [MKWR]
182737
182663
-
Gln
CTG
[ENA]
¡û
>W1711751483
MUNU01000013
Gammaproteobacteria
Rhodanobacter sp. B05 [MUNU]
205398
205472
+
Gln
CTG
[ENA]
¡û
>W1711751546
MUNV01000019
Gammaproteobacteria
Rhodanobacter sp. B04 [MUNV]
8926
9000
+
Gln
CTG
[ENA]
¡û
>W131046200
AMSF01000060
Gammaproteobacteria
Dyella ginsengisoli LA-4 [AMSF]
3084
3010
-
Gln
CTG
[ENA]
¡û
>W131218964
ATYD01000211
Gammaproteobacteria
Rhodanobacter sp. OR444 [ATYD]
2196
2122
-
Gln
CTG
[ENA]
¡û
>W131219033
ATYF01000005
Gammaproteobacteria
Rhodanobacter sp. OR92 [ATYF]
426862
426936
+
Gln
CTG
[ENA]
¡û
>W131226653
AUEN01000004
Gammaproteobacteria
Lysobacter sp. URHA0019 [AUEN]
367993
368067
+
Gln
CTG
[ENA]
¡û
>W131231917
AUIV01000011
Gammaproteobacteria
Thermomonas fusca DSM 15424 [AUIV]
30787
30861
+
Gln
CTG
[ENA]
¡û
>WENV180040092
LLBY010375596
[LLBY] soil metagenome; soil from tomato rhizosphere
506
432
-
Gln
CTG
[ENA]
¡û
>WENV180041521
LLBZ010168576
[LLBZ] soil metagenome; soil from tomato rhizosphere
103
177
+
Gln
CTG
[ENA]
¡û
>WENV180283821
OBID01003688
[OBID] metagenome; sludge
2319
2245
-
Gln
CTG
[ENA]
¡û
>WENV180297711
OBJA01067475
[OBJA] soil metagenome; sediment, water from around vicinity
139
213
+
Gln
CTG
[ENA]
¡û
>WENV180693867
OCZS011689714
[OCZS] soil metagenome; soil
155
81
-
Gln
CTG
[ENA]
¡û
>WENV181166683
OEIU01001131
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
14606
14680
+
Gln
CTG
[ENA]
¡û
>WENV181170501
OEIV010051092
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
159
85
-
Gln
CTG
[ENA]
¡û
>WENV181221745
OFCY01000015
[OFCY] metagenome; soil
34729
34655
-
Gln
CTG
[ENA]
¡û
>WENV181221826
OFCZ01000012
[OFCZ] metagenome; soil
30560
30486
-
Gln
CTG
[ENA]
¡û
>WENV181222428
OFDB01000009
[OFDB] metagenome; soil
68398
68324
-
Gln
CTG
[ENA]
¡û
>W141151889
AXBJ01000005
Gammaproteobacteria
Rhodanobacter sp. OR87 [AXBJ]
190698
190624
-
Gln
CTG
[ENA]
¡û
>W141215584
AZUH01000001
Gammaproteobacteria
Pseudoxanthomonas suwonensis J42 [AZUH]
2294
2368
+
Gln
CTG
[ENA]
¡û
>W141216566
AZUZ01000004
Gammaproteobacteria
Pseudoxanthomonas suwonensis J47 [AZUZ]
2089
2163
+
Gln
CTG
[ENA]
¡û
>W141216664
AZVB01000004
Gammaproteobacteria
Pseudoxanthomonas sp. J35 [AZVB]
87424
87498
+
Gln
CTG
[ENA]
¡û
>W141277578
JAES01000002
Gammaproteobacteria
Pseudoxanthomonas suwonensis J43 [JAES]
208447
208373
-
Gln
CTG
[ENA]
¡û
>W141282819
JAJA01000005
Gammaproteobacteria
Lysobacter capsici AZ78 [JAJA]
225607
225533
-
Gln
CTG
[ENA]
¡û
>WENV183731904
PJTU01000005
[PJTU] soil metagenome; Soil enriched on wood chips: beechwood xylan treatment
113756
113682
-
Gln
CTG
[ENA]
¡û
>WENV183732052
PJTV01000002
[PJTV] soil metagenome; Soil enriched on wood chips: alkali lignin treatment
576452
576378
-
Gln
CTG
[ENA]
¡û
>WENV183732340
PJTX01000032
[PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment
79367
79441
+
Gln
CTG
[ENA]
¡û
>WENV183733550
PJTY01004372
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
1194
1268
+
Gln
CTG
[ENA]
¡û
>WENV183733933
PJTZ01000004
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
342183
342257
+
Gln
CTG
[ENA]
¡û
>WENV183734814
PJUA01000025
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
190506
190580
+
Gln
CTG
[ENA]
¡û
>WENV183735529
PJUB01000029
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
190506
190580
+
Gln
CTG
[ENA]
¡û
>WENV183736101
PJUC01000026
[PJUC] soil metagenome; Soil enriched on filter paper
190506
190580
+
Gln
CTG
[ENA]
¡û
>WENV183741402
PJUG01000004
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
291332
291258
-
Gln
CTG
[ENA]
¡û
>WENV183741904
PJUH01000005
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
147555
147629
+
Gln
CTG
[ENA]
¡û
>WENV183742814
PJUI01000330
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
6135
6209
+
Gln
CTG
[ENA]
¡û
>WENV183742963
PJUJ01000001
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
496719
496645
-
Gln
CTG
[ENA]
¡û
>WENV183743780
PJUK01000001
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
745897
745823
-
Gln
CTG
[ENA]
¡û
>WENV183744512
PJUL01000002
[PJUL] feces metagenome; Chicken feces enriched on filter paper
496702
496628
-
Gln
CTG
[ENA]
¡û
>WENV183747929
PPFU01003183
[PPFU] hypolithon metagenome; Antarctic Hypolithon
1927
2001
+
Gln
CTG
[ENA]
¡û
>WENV170009883
APMI01004467
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
914
988
+
Gln
CTG
[ENA]
¡û
>WENV170010814
APMI01029940
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
1681
1755
+
Gln
CTG
[ENA]
¡û
>WENV170011538
APMI01072772
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
5871
5797
-
Gln
CTG
[ENA]
¡û
>WENV170551729
CXWJ01019490
[CXWJ] wastewater metagenome; activated sludge
2239
2165
-
Gln
CTG
[ENA]
¡û
>WENV170654722
JRYL01009463
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
9307
9381
+
Gln
CTG
[ENA]
¡û
>WENV170654731
JRYL01010475
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
772
846
+
Gln
CTG
[ENA]
¡û
>WENV170681039
LFEF01045538
[LFEF] freshwater metagenome; waterbloom
222
148
-
Gln
CTG
[ENA]
¡û
>WENV170705840
LNAP01000455
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
39590
39664
+
Gln
CTG
[ENA]
¡û
>WENV170720809
LSQX01167195
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
1253
1179
-
Gln
CTG
[ENA]
¡û
>WENV170722975
LSQX01250088
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
14534
14608
+
Gln
CTG
[ENA]
¡û
>WENV170966288
MTEX01006017
[MTEX] soil metagenome; soil biostimulated with molasses as carbon source
812
886
+
Gln
CTG
[ENA]
¡û
>WENV170966334
MTEX01006726
[MTEX] soil metagenome; soil biostimulated with molasses as carbon source
2564
2638
+
Gln
CTG
[ENA]
¡û
>WENV170966920
MTEY01014067
[MTEY] soil metagenome; soil biostimulated with seedmeal as carbon source
475
549
+
Gln
CTG
[ENA]
¡û
>C181021714
CP016836
Gammaproteobacteria
Xanthomonas citri pv. mangiferaeindicae XC01 [CP016836]
790184
790110
-
Gln
CTG
-
¡û
>C181081820
CP023465
Gammaproteobacteria
Lysobacter capsici KNU-14 [CP023465]
4931371
4931297
-
Gln
CTG
-
¡û
>C181180385
CP029556
Gammaproteobacteria
Lysobacter oculi 83-4 [CP029556]
1777106
1777032
-
Gln
CTG
-
¡û
>C181200041
CP031413
Gammaproteobacteria
Lysobacter sp. TY2-98 [CP031413]
53192
53266
+
Gln
CTG
-
¡û
>C191183304
CP040871
Gammaproteobacteria
Thermomonas aquatica SY21 [CP040871]
1308489
1308415
-
Gln
CTG
-
¡û
>W141713903
JMTZ01000021
Gammaproteobacteria
Lysobacter antibioticus [JMTZ]
18847
18921
+
Gln
CTG
[ENA]
¡û
>W1910821938
MWIO01000030
Gammaproteobacteria
Rhodanobacter lindaniclasticus DSM 17932 [MWIO]
212754
212680
-
Gln
CTG
[ENA]
¡û
>W1911405246
NWQM01000001
Gammaproteobacteria
Xanthomonadaceae bacterium NML03-0222 [NWQM]
71187
71261
+
Gln
CTG
[ENA]
¡û
>W1911405305
NWQN01000021
Gammaproteobacteria
Xanthomonadaceae bacterium NML75-0749 [NWQN]
204047
203973
-
Gln
CTG
[ENA]
¡û
>W1911405356
NWQO01000002
Gammaproteobacteria
Xanthomonadaceae bacterium NML91-0268 [NWQO]
73032
73106
+
Gln
CTG
[ENA]
¡û
>W1911405385
NWQP01000009
Gammaproteobacteria
Xanthomonadaceae bacterium NML71-0210 [NWQP]
40292
40218
-
Gln
CTG
[ENA]
¡û
>W1911405432
NWQQ01000006
Gammaproteobacteria
Xanthomonadaceae bacterium NML95-0200 [NWQQ]
65267
65193
-
Gln
CTG
[ENA]
¡û
>W1911405512
NWQR01000003
Gammaproteobacteria
Xanthomonadaceae bacterium NML08-0793 [NWQR]
103504
103430
-
Gln
CTG
[ENA]
¡û
>W1911405533
NWQS01000007
Gammaproteobacteria
Xanthomonadaceae bacterium NML120232 [NWQS]
102698
102624
-
Gln
CTG
[ENA]
¡û
>W1911405586
NWQT01000017
Gammaproteobacteria
Xanthomonadaceae bacterium NML07-0707 [NWQT]
96763
96689
-
Gln
CTG
[ENA]
¡û
>W1911770906
QXJI01000003
Gammaproteobacteria
Lysobacter sp. C8-1 [QXJI]
407766
407840
+
Gln
CTG
[ENA]
¡û
>W1810195902
PKSO01000004
Gammaproteobacteria
Pseudoxanthomonas sp. KAs_5_3 [PKSO]
909662
909736
+
Gln
CTG
[ENA]
¡û
>W1810514379
QBUW01000009
Gammaproteobacteria
Rhodanobacter thiooxydans CR1 [QBUW]
124924
124850
-
Gln
CTG
[ENA]
¡û
>W1810591942
QFWQ01000006
Gammaproteobacteria
Rhodanobacter denitrificans Yn1 [QFWQ]
360454
360528
+
Gln
CTG
[ENA]
¡û
>W1810692806
QLKV01000010
Gammaproteobacteria
Thermomonas haemolytica HAMBI_2467 [QLKV]
12771
12697
-
Gln
CTG
[ENA]
¡û
>W1810858424
QTJR01000002
Gammaproteobacteria
Lysobacter soli KCTC 22011 [QTJR]
315247
315321
+
Gln
CTG
[ENA]
¡û
>W1810860389
QTSU01000002
Gammaproteobacteria
Lysobacter silvisoli zong2l5 [QTSU]
370162
370088
-
Gln
CTG
[ENA]
¡û
>C151077929
CP011144
Gammaproteobacteria
Pseudoxanthomonas suwonensis J1 [CP011144]
1440115
1440041
-
Gln
CTG
[Ensembl]
¡û
>W2010701691
JACHGU010000007
Gammaproteobacteria
Pseudoxanthomonas broegbernensis DSM 12573 [JACHGU]
100933
101007
+
Gln
CTG
[ENA]
¡û
>W2010713334
JACHTE010000003
Gammaproteobacteria
Lysobacter sp. SG-8 [JACHTE]
273304
273378
+
Gln
CTG
[ENA]
¡û
>W2010713370
JACHTF010000001
Gammaproteobacteria
Lysobacter spongiae 119BY6-57 [JACHTF]
62249
62323
+
Gln
CTG
[ENA]
¡û
>W2010717861
JACHYJ010000009
Gammaproteobacteria
Luteimonas sp. RC10 [JACHYJ]
55928
55854
-
Gln
CTG
[ENA]
¡û
>W2010718024
JACHYM010000001
Gammaproteobacteria
Pseudoxanthomonas sp. OG2 [JACHYM]
1502657
1502583
-
Gln
CTG
[ENA]
¡û
>W2010910296
MSZW01000003
Gammaproteobacteria
Thermomonas haemolytica LMG 19653 [MSZW]
102701
102775
+
Gln
CTG
[ENA]
¡û
>W2010918226
MWIO01000030
Gammaproteobacteria
Rhodanobacter lindaniclasticus DSM 17932 [MWIO]
212754
212680
-
Gln
CTG
[ENA]
¡û
>W2010918288
MWIP01000011
Gammaproteobacteria
Pseudoxanthomonas broegbernensis DSM 12573 [MWIP]
100965
101039
+
Gln
CTG
[ENA]
¡û
>W2011135239
NWQM01000001
Gammaproteobacteria
Xanthomonadaceae bacterium NML03-0222 [NWQM]
71187
71261
+
Gln
CTG
[ENA]
¡û
>W2011135298
NWQN01000021
Gammaproteobacteria
Xanthomonadaceae bacterium NML75-0749 [NWQN]
204047
203973
-
Gln
CTG
[ENA]
¡û
>W2011135349
NWQO01000002
Gammaproteobacteria
Xanthomonadaceae bacterium NML91-0268 [NWQO]
73032
73106
+
Gln
CTG
[ENA]
¡û
>W2011135378
NWQP01000009
Gammaproteobacteria
Xanthomonadaceae bacterium NML71-0210 [NWQP]
40292
40218
-
Gln
CTG
[ENA]
¡û
>W2011135425
NWQQ01000006
Gammaproteobacteria
Xanthomonadaceae bacterium NML95-0200 [NWQQ]
65267
65193
-
Gln
CTG
[ENA]
¡û
>W2011135505
NWQR01000003
Gammaproteobacteria
Xanthomonadaceae bacterium NML08-0793 [NWQR]
103504
103430
-
Gln
CTG
[ENA]
¡û
>W2011135526
NWQS01000007
Gammaproteobacteria
Xanthomonadaceae bacterium NML120232 [NWQS]
102698
102624
-
Gln
CTG
[ENA]
¡û
>W2011135579
NWQT01000017
Gammaproteobacteria
Xanthomonadaceae bacterium NML07-0707 [NWQT]
96763
96689
-
Gln
CTG
[ENA]
¡û
>W2011187529
PDWO01000006
Gammaproteobacteria
Pseudoxanthomonas kaohsiungensis DSM 17583 [PDWO]
154959
155033
+
Gln
CTG
[ENA]
¡û
>W2011187581
PDWP01000022
Gammaproteobacteria
Pseudoxanthomonas suwonensis DSM 17175 [PDWP]
27599
27673
+
Gln
CTG
[ENA]
¡û
>W2011187666
PDWR01000008
Gammaproteobacteria
Pseudoxanthomonas sangjuensis DSM 28345 [PDWR]
106020
106094
+
Gln
CTG
[ENA]
¡û
>W2011187858
PDWV01000038
Gammaproteobacteria
Pseudoxanthomonas mexicana DSM 17121 [PDWV]
3315
3389
+
Gln
CTG
[ENA]
¡û
>W2011187889
PDWW01000005
Gammaproteobacteria
Pseudoxanthomonas japonensis DSM 17109 [PDWW]
116057
115983
-
Gln
CTG
[ENA]
¡û
>W2011328206
QXJI01000003
Gammaproteobacteria
Lysobacter sp. C8-1 [QXJI]
407766
407840
+
Gln
CTG
[ENA]
¡û
>W2011416860
RFLY01000006
Gammaproteobacteria
Lysobacter sp. 4284/11 [RFLY]
98125
98051
-
Gln
CTG
[ENA]
¡û
>W2011538082
SCMS01000019
Gammaproteobacteria
Xanthomonadaceae bacterium 2PA [SCMS]
67572
67498
-
Gln
CTG
[ENA]
¡û
>W2011538136
SCMT01000020
Gammaproteobacteria
Xanthomonadaceae bacterium 2PB [SCMT]
70874
70800
-
Gln
CTG
[ENA]
¡û
>W2011555601
SELT01000011
Gammaproteobacteria
Lysobacter sp. 17J7-1 [SELT]
49950
50024
+
Gln
CTG
[ENA]
¡û
>W2011611704
SJRW01000001
Gammaproteobacteria
Luteimonas arsenica 26-35 [SJRW]
419451
419525
+
Gln
CTG
[ENA]
¡û
>W2011617253
SKFB01000029
Gammaproteobacteria
Lysobacter sp. N42 [SKFB]
4522
4448
-
Gln
CTG
[ENA]
¡û
>W2011627686
SMAP01000009
Gammaproteobacteria
Thermomonas haemolytica DSM 13605 [SMAP]
12891
12817
-
Gln
CTG
[ENA]
¡û
>W2011639418
SMRQ01000008
Gammaproteobacteria
Lysobacter sp. 17J68-2 [SMRQ]
42921
42847
-
Gln
CTG
[ENA]
¡û
>W2011640405
SMTF01000005
Gammaproteobacteria
Luteimonas aestuarii B9 [SMTF]
19918
19844
-
Gln
CTG
[ENA]
¡û
>W2011640456
SMTG01000005
Gammaproteobacteria
Luteimonas terrae THG-MD21 [SMTG]
42931
43005
+
Gln
CTG
[ENA]
¡û
>W2011679773
SROY01000001
Gammaproteobacteria
Thermomonas fusca SHC 3-19 [SROY]
543975
544049
+
Gln
CTG
[ENA]
¡û
>W2011752855
SZUA01000003
Gammaproteobacteria
Luteimonas sp. H23 [SZUA]
532291
532365
+
Gln
CTG
[ENA]
¡û
>W2012015089
VFID01000012
Gammaproteobacteria
Pseudoxanthomonas sp. z9 [VFID]
268080
268154
+
Gln
CTG
[ENA]
¡û
>W2012021164
VFPB01000001
Gammaproteobacteria
Pseudoxanthomonas sp. 3HH-4 [VFPB]
856383
856457
+
Gln
CTG
[ENA]
¡û
>W2012037007
VICE01000148
Gammaproteobacteria
Lysobacter aestuarii JCM 31130 [VICE]
60646
60720
+
Gln
CTG
[ENA]
¡û
>W2012081589
VLKN01000004
Gammaproteobacteria
Luteimonas cucumeris CGMCC 1.10821 [VLKN]
386541
386467
-
Gln
CTG
[ENA]
¡û
>W2012084391
VLNV01000007
Gammaproteobacteria
Lysobacter sp. SYSU H10001 [VLNV]
252598
252524
-
Gln
CTG
[ENA]
¡û
>W2012103139
VOHK01000006
Gammaproteobacteria
Luteimonas marina FR1330 [VOHK]
214558
214484
-
Gln
CTG
[ENA]
¡û
>W2012143634
VTRV01000165
Gammaproteobacteria
Lysobacter sp. UKS-15 [VTRV]
4270
4196
-
Gln
CTG
[ENA]
¡û
>W2012409518
WOXT01000001
Gammaproteobacteria
Lysobacter sp. HX-5-24 [WOXT]
1201859
1201933
+
Gln
CTG
[ENA]
¡û
>W2110018941
BMCL01000001
Gammaproteobacteria
Pseudoxanthomonas indica CCM 7430 [BMCL]
244981
245055
+
Gln
CTG
[ENA]
¡û
>W2110048406
BMXY01000004
Gammaproteobacteria
Lysobacter xinjiangensis KCTC 22558 [BMXY]
200409
200483
+
Gln
CTG
[ENA]
¡û
>W2110048759
BMYD01000004
Gammaproteobacteria
Lysobacter bugurensis KCTC 23077 [BMYD]
218873
218799
-
Gln
CTG
[ENA]
¡û
>W2110050831
BMZT01000007
Gammaproteobacteria
Luteimonas padinae KCTC 52403 [BMZT]
215350
215424
+
Gln
CTG
[ENA]
¡û
>W2110068504
BOUK01000014
Gammaproteobacteria
Pseudoxanthomonas japonensis TUM 20250 [BOUK]
20001
19927
-
Gln
CTG
[ENA]
¡û
>W2110260454
JACSQJ010000006
Gammaproteobacteria
Luteimonas sp. Sa2BVA3 [JACSQJ]
27098
27172
+
Gln
CTG
[ENA]
¡û
>W2110267398
JACVAG010000002
Gammaproteobacteria
Pseudoxanthomonas sp. PXM04 [JACVAG]
325289
325215
-
Gln
CTG
[ENA]
¡û
>W2110267444
JACVAJ010000001
Gammaproteobacteria
Pseudoxanthomonas sp. PXM01 [JACVAJ]
1634193
1634119
-
Gln
CTG
[ENA]
¡û
>W2110267498
JACVAK010000002
Gammaproteobacteria
Pseudoxanthomonas sp. PXM02 [JACVAK]
272398
272472
+
Gln
CTG
[ENA]
¡û
>W2110267808
JACVAU010000001
Gammaproteobacteria
Pseudoxanthomonas sp. PXM03 [JACVAU]
672188
672262
+
Gln
CTG
[ENA]
¡û
>W2110285176
JACXXL010000058
Gammaproteobacteria
Lysobacter capsici VKM B-2533 [JACXXL]
24875
24949
+
Gln
CTG
[ENA]
¡û
>W2110302665
JADBJR010000003
Gammaproteobacteria
Rhodanobacter sp. B2A1Ga4 [JADBJR]
276002
275928
-
Gln
CTG
[ENA]
¡û
>W2110319340
JADHDV010000018
Gammaproteobacteria
Pseudoxanthomonas beigongshangi REN9 [JADHDV]
46075
46001
-
Gln
CTG
[ENA]
¡û
>W2110336694
JADLZT010000007
Gammaproteobacteria
Lysobacter niastensis DSM 18481 [JADLZT]
5304
5230
-
Gln
CTG
[ENA]
¡û
>W2110454129
JAETWA010000037
Gammaproteobacteria
Luteimonas sp. SJ-9 [JAETWA]
170386
170460
+
Gln
CTG
[ENA]
¡û
>W2110546127
JAGGRH010000002
Gammaproteobacteria
Lysobacter sp. ISL-42 [JAGGRH]
59024
58950
-
Gln
CTG
[ENA]
¡û
>W2110546181
JAGGRI010000011
Gammaproteobacteria
Lysobacter sp. ISL-50 [JAGGRI]
59040
58966
-
Gln
CTG
[ENA]
¡û
>W2110546236
JAGGRJ010000023
Gammaproteobacteria
Lysobacter sp. ISL-52 [JAGGRJ]
42908
42982
+
Gln
CTG
[ENA]
¡û
>W2110546262
JAGGRK010000005
Gammaproteobacteria
Lysobacter sp. ISL-54 [JAGGRK]
3407
3481
+
Gln
CTG
[ENA]
¡û
>W2110561101
JAGKTC010000001
Gammaproteobacteria
Pseudoxanthomonas helianthi 110414 [JAGKTC]
403679
403605
-
Gln
CTG
[ENA]
¡û
>W2110600301
JAHFVL010000001
Gammaproteobacteria
Rhodanobacter sp. LX-99 [JAHFVL]
1272043
1271969
-
Gln
CTG
[ENA]
¡û
>W2110600339
JAHFVM010000001
Gammaproteobacteria
Rhodanobacter sp. LX-100 [JAHFVM]
599853
599927
+
Gln
CTG
[ENA]
¡û
>W2110649534
JAHUWP010000001
Gammaproteobacteria
Pseudoxanthomonas sp. PXM05 [JAHUWP]
1359329
1359403
+
Gln
CTG
[ENA]
¡û
>W2110662212
JAHXYJ010000005
Gammaproteobacteria
Lysobacter gummosus EVS02B [JAHXYJ]
135879
135953
+
Gln
CTG
[ENA]
¡û
>W2110662270
JAHXYK010000003
Gammaproteobacteria
Lysobacter sp. ESA13C [JAHXYK]
108449
108523
+
Gln
CTG
[ENA]
¡û
>W2110669351
JAIEUJ010000002
Gammaproteobacteria
Lysobacter sp. GW1-59 [JAIEUJ]
644440
644366
-
Gln
CTG
[ENA]
¡û
>W2110692745
JAIQDJ010000006
Gammaproteobacteria
Thermomonas sp. RSS23 [JAIQDJ]
111289
111363
+
Gln
CTG
[ENA]
¡û
>C201107323
CP042218
Gammaproteobacteria
Luteimonas sp. Gr-4 [CP042218]
1133351
1133277
-
Gln
CTG
-
¡û
>C211021226
AP024545
Gammaproteobacteria
Lysobacter caseinilyticus KVB24 [AP024545]
915242
915168
-
Gln
CTG
-
¡û
>C211021273
AP024546
Gammaproteobacteria
Lysobacter helvus D10 [AP024546]
915240
915166
-
Gln
CTG
-
¡û
>C211120843
CP059266
Gammaproteobacteria
Pseudoxanthomonas sp. [CP059266]
332569
332495
-
Gln
CTG
-
¡û
>C211127614
CP060028
Gammaproteobacteria
Pseudoxanthomonas mexicana GTZY [CP060028]
3511452
3511526
+
Gln
CTG
-
¡û
>C211137391
CP060711
Gammaproteobacteria
Thermomonas brevis KACC 16975 [CP060711]
1496978
1496904
-
Gln
CTG
-
¡û
>C211138187
CP060731
Gammaproteobacteria
Pseudoxanthomonas mexicana GTZY2 [CP060731]
1502527
1502601
+
Gln
CTG
-
¡û
>C211147930
CP061497
Gammaproteobacteria
Thermomonas sp. XSG [CP061497]
1828424
1828498
+
Gln
CTG
-
¡û
>C211154347
CP061847
Gammaproteobacteria
Lysobacter sp. CW239 [CP061847]
349263
349337
+
Gln
CTG
-
¡û
>C211178925
CP063656
Gammaproteobacteria
Lysobacter sp. H21R20 [CP063656]
2475101
2475027
-
Gln
CTG
-
¡û
>C211178973
CP063657
Gammaproteobacteria
Lysobacter sp. H23M41 [CP063657]
2381340
2381266
-
Gln
CTG
-
¡û
>C211179021
CP063658
Gammaproteobacteria
Lysobacter sp. H23M47 [CP063658]
2377103
2377029
-
Gln
CTG
-
¡û
>C211180152
CP063772
Gammaproteobacteria
Lysobacter sp. H21R4 [CP063772]
2391002
2390928
-
Gln
CTG
-
¡û
>C211292429
CP071517
Gammaproteobacteria
Lysobacter arenosi R7 [CP071517]
2233862
2233788
-
Gln
CTG
-
¡û
>C211292456
CP071518
Gammaproteobacteria
Lysobacter solisilvae R19 [CP071518]
1668181
1668255
+
Gln
CTG
-
¡û
>C211342495
CP076103
Gammaproteobacteria
Lysobacter capsici NF87_2 [CP076103]
4986950
4986876
-
Gln
CTG
-
¡û
>W2110717420
JAJAVH010000001
Gammaproteobacteria
Luteimonas panaciterrae Gsoil 068 [JAJAVH]
804131
804205
+
Gln
CTG
[ENA]
¡û
>C211402313
CP083441
Gammaproteobacteria
Pseudoxanthomonas japonensis XL7 [CP083441]
3090116
3090042
-
Gln
CTG
-
¡û
>C211425608
OU015430
Gammaproteobacteria
Lysobacter sp. CECT 30171 [OU015430]
2484530
2484456
-
Gln
CTG
-
¡û
>C231253564
CP088918
Gammaproteobacteria
Rhodanobacter denitrificans FW107-2APBS1 [CP088918]
2894764
2894690
-
Gln
CTG
-
¡û
>C231253588
CP088919
Gammaproteobacteria
Rhodanobacter denitrificans DSM-24678 [CP088919]
977257
977331
+
Gln
CTG
-
¡û
>C231253661
CP088920
Gammaproteobacteria
Rhodanobacter denitrificans FW104-10F02 [CP088920]
3224814
3224740
-
Gln
CTG
-
¡û
>C231253710
CP088921
Gammaproteobacteria
Rhodanobacter denitrificans FW104-R3 [CP088921]
3224810
3224736
-
Gln
CTG
-
¡û
>C231253741
CP088922
Gammaproteobacteria
Rhodanobacter denitrificans FW104-10B01 [CP088922]
2587137
2587211
+
Gln
CTG
-
¡û
>C231253808
CP088923
Gammaproteobacteria
Rhodanobacter thiooxydans FW510-R12 [CP088923]
3713865
3713791
-
Gln
CTG
-
¡û
>C231253839
CP088925
Gammaproteobacteria
Rhodanobacter denitrificans FW104-MT042 [CP088925]
2513221
2513295
+
Gln
CTG
-
¡û
>C231254678
CP088980
Gammaproteobacteria
Rhodanobacter denitrificans FW104-R5 [CP088980]
3240342
3240268
-
Gln
CTG
-
¡û
>C231266499
CP089924
Gammaproteobacteria
Lysobacter sp. 5GHs7-4 [CP089924]
4224795
4224721
-
Gln
CTG
-
¡û
>C231266561
CP089925
Gammaproteobacteria
Lysobacter sp. KIS68-7 [CP089925]
492754
492680
-
Gln
CTG
-
¡û
>C231294143
CP091317
Gammaproteobacteria
Lysobacter soli RCu6 [CP091317]
4018383
4018309
-
Gln
CTG
-
¡û
>C231331328
CP093311
Gammaproteobacteria
Thermomonas sp. IMCC34681 [CP093311]
2394413
2394339
-
Gln
CTG
-
¡û
>C231332278
CP093340
Gammaproteobacteria
Luteimonas sp. S4-F44 [CP093340]
2937009
2936935
-
Gln
CTG
-
¡û
>C231332318
CP093341
Gammaproteobacteria
Lysobacter sp. S4-A87 [CP093341]
3154480
3154554
+
Gln
CTG
-
¡û
>C231335012
CP093547
Gammaproteobacteria
Lysobacter gummosus 10.1.1 [CP093547]
4709806
4709732
-
Gln
CTG
-
¡û
>C231343441
CP094357
Gammaproteobacteria
Lysobacter capsici VKM B-2533 [CP094357]
4931926
4931852
-
Gln
CTG
-
¡û
>C231358541
CP095184
Gammaproteobacteria
Pseudoxanthomonas mexicana F12 [CP095184]
2515447
2515521
+
Gln
CTG
-
¡û
>C231358669
CP095186
Gammaproteobacteria
Pseudoxanthomonas mexicana F31 [CP095186]
1709790
1709716
-
Gln
CTG
-
¡û
>C231358710
CP095187
Gammaproteobacteria
Pseudoxanthomonas sp. F37 [CP095187]
3286450
3286376
-
Gln
CTG
-
¡û
>C231551832
CP113783
Gammaproteobacteria
Pseudoxanthomonas sp. SE1 [CP113783]
753374
753448
+
Gln
CTG
-
¡û
>C231572211
CP116007
Gammaproteobacteria
Pseudoxanthomonas mexicana DMF-5 [CP116007]
650830
650756
-
Gln
CTG
-
¡û
>C241111553
CP046603
Gammaproteobacteria
Lysobacter soli XL170 [CP046603]
739687
739761
+
Gln
CTG
-
¡û
>C241277201
CP127409
Gammaproteobacteria
Rhodanobacter thiooxydans C33 [CP127409]
574672
574746
+
Gln
CTG
-
¡û
>C241317283
CP134269
Gammaproteobacteria
Lysobacter capsici XL2 [CP134269]
4937903
4937829
-
Gln
CTG
-
¡û
>C241317333
CP134270
Gammaproteobacteria
Lysobacter capsici XL1 [CP134270]
4937909
4937835
-
Gln
CTG
-
¡û
>W1511348445
JRKJ01000004
Gammaproteobacteria
Lysobacter dokdonensis DS-58 [JRKJ]
3714
3640
-
Gln
CTG
[ENA]
¡û
>W1511511135
JXSS01000048
Gammaproteobacteria
Lysobacter sp. A03 [JXSS]
109475
109549
+
Gln
CTG
[ENA]
¡û
>W1511582575
LASZ01000020
Gammaproteobacteria
Luteimonas sp. FCS-9 [LASZ]
30504
30578
+
Gln
CTG
[ENA]
¡û
>W1511595028
LBMI01000007
Gammaproteobacteria
Lysobacter capsici X2-3 [LBMI]
1335566
1335492
-
Gln
CTG
[ENA]
¡û
>W11180907
AGIL01000012
Gammaproteobacteria
Rhodanobacter denitrificans 2APBS1 [AGIL]
47136
47062
-
Gln
CTG
[ENA]
¡û
>C161031535
CP011129
Gammaproteobacteria
Lysobacter antibioticus 76 [CP011129]
1220316
1220390
+
Gln
CTG
[Ensembl]
¡û
>C161031618
CP011130
Gammaproteobacteria
Lysobacter capsici 55 [CP011130]
4880030
4879956
-
Gln
CTG
[Ensembl]
¡û
>C161031646
CP011131
Gammaproteobacteria
Lysobacter gummosus 3.2.11 [CP011131]
4709805
4709731
-
Gln
CTG
[Ensembl]
¡û
>C161052114
CP013141
Gammaproteobacteria
Lysobacter antibioticus ATCC 29479 [CP013141]
2298016
2297942
-
Gln
CTG
-
¡û
>C161078246
CP014841
Gammaproteobacteria
Dyella thiooxydans ATSB10 [CP014841]
2600655
2600581
-
Gln
CTG
[Ensembl]
¡û
>W1610027231
AVPS01000001
Gammaproteobacteria
Lysobacter concretionis Ko07 = DSM 16239 [AVPS]
361681
361755
+
Gln
CTG
[ENA]
¡û
>W1610027311
AVPT01000018
Gammaproteobacteria
Lysobacter arseniciresistens ZS79 [AVPT]
22128
22054
-
Gln
CTG
[ENA]
¡û
>W121071333
AJXV01000015
Gammaproteobacteria
Rhodanobacter denitrificans 116-2 [AJXV]
152821
152747
-
Gln
CTG
[ENA]
¡û
>W121071383
AJXW01000024
Gammaproteobacteria
Rhodanobacter thiooxydans LCS2 [AJXW]
11865
11791
-
Gln
CTG
[ENA]
¡û
>C131003722
CP003470
Gammaproteobacteria
Rhodanobacter denitrificans 2APBS1 [CP003470]
3570212
3570138
-
Gln
CTG
-
¡û
>W1610675815
LKIT01000002
Gammaproteobacteria
Xanthomonas sp. Mitacek01 [LKIT]
96808
96882
+
Gln
CTG
[ENA]
¡û
>W1610726017
LMFH01000008
Gammaproteobacteria
Lysobacter sp. Root494 [LMFH]
278501
278427
-
Gln
CTG
[ENA]
¡û
>W1610727181
LMGE01000016
Gammaproteobacteria
Lysobacter sp. Root559 [LMGE]
137697
137623
-
Gln
CTG
[ENA]
¡û
>W1610727852
LMGS01000009
Gammaproteobacteria
Lysobacter sp. Root604 [LMGS]
1193685
1193759
+
Gln
CTG
[ENA]
¡û
>W1610728131
LMGY01000012
Gammaproteobacteria
Pseudoxanthomonas sp. Root630 [LMGY]
552429
552503
+
Gln
CTG
[ENA]
¡û
>W1610728220
LMHA01000001
Gammaproteobacteria
Pseudoxanthomonas sp. Root65 [LMHA]
577325
577251
-
Gln
CTG
[ENA]
¡û
>W1610728446
LMHF01000009
Gammaproteobacteria
Lysobacter sp. Root667 [LMHF]
145522
145596
+
Gln
CTG
[ENA]
¡û
>W1610728794
LMHM01000001
Gammaproteobacteria
Lysobacter sp. Root690 [LMHM]
262219
262145
-
Gln
CTG
[ENA]
¡û
>W1610729943
LMIK01000005
Gammaproteobacteria
Lysobacter sp. Root76 [LMIK]
882696
882770
+
Gln
CTG
[ENA]
¡û
>W1610730970
LMJF01000012
Gammaproteobacteria
Lysobacter sp. Root916 [LMJF]
83262
83336
+
Gln
CTG
[ENA]
¡û
>W1610731286
LMJN01000001
Gammaproteobacteria
Lysobacter sp. Root96 [LMJN]
697891
697965
+
Gln
CTG
[ENA]
¡û
>W1610731352
LMJO01000012
Gammaproteobacteria
Lysobacter sp. Root983 [LMJO]
728993
729067
+
Gln
CTG
[ENA]
¡û
>W1610742923
LMSK01000002
Gammaproteobacteria
Rhodanobacter sp. Soil772 [LMSK]
368757
368683
-
Gln
CTG
[ENA]
¡û
>W1610912402
LSIF01000095
Gammaproteobacteria
Pseudoxanthomonas mexicana [LSIF]
11743
11817
+
Gln
CTG
[ENA]
¡û
>W1610958323
LVJP01001113
Gammaproteobacteria
Rhodanobacter denitrificans [LVJP]
9
83
+
Gln
CTG
[ENA]
¡û
>W1610958373
LVJQ01000495
Gammaproteobacteria
Rhodanobacter sp. FW104-R5 [LVJQ]
192
118
-
Gln
CTG
[ENA]
¡û
>W1610958406
LVJQ01002515
Gammaproteobacteria
Rhodanobacter sp. FW104-R5 [LVJQ]
543
617
+
Gln
CTG
[ENA]
¡û
>W1610958427
LVJR01000005
Gammaproteobacteria
Rhodanobacter sp. FW104-R8 [LVJR]
53994
53920
-
Gln
CTG
[ENA]
¡û
>W1610958476
LVJS01000027
Gammaproteobacteria
Rhodanobacter thiooxydans [LVJS]
53318
53392
+
Gln
CTG
[ENA]
¡û
>W1610958525
LVJT01000013
Gammaproteobacteria
Rhodanobacter sp. FW510-T8 [LVJT]
89489
89563
+
Gln
CTG
[ENA]
¡û
>W1610958570
LVJU01000012
Gammaproteobacteria
Rhodanobacter sp. FW510-R10 [LVJU]
48487
48561
+
Gln
CTG
[ENA]
¡û
>W1610958662
LVJV01001861
Gammaproteobacteria
Rhodanobacter sp. FW510-R12 [LVJV]
2837
2763
-
Gln
CTG
[ENA]
¡û
>W1610958663
LVJV01001879
Gammaproteobacteria
Rhodanobacter sp. FW510-R12 [LVJV]
2783
2709
-
Gln
CTG
[ENA]
¡û
>W1710023465
AVPS01000001
Gammaproteobacteria
Lysobacter concretionis Ko07 = DSM 16239 [AVPS]
361681
361755
+
Gln
CTG
[ENA]
¡û
>W1710023545
AVPT01000018
Gammaproteobacteria
Lysobacter arseniciresistens ZS79 [AVPT]
22128
22054
-
Gln
CTG
[ENA]
¡û
>W1710567384
FOSS01000001
Gammaproteobacteria
Lysobacter sp. cf310 [FOSS]
995737
995663
-
Gln
CTG
[ENA]
¡û
>W1710570539
FOVF01000008
Gammaproteobacteria
Dokdonella immobilis [FOVF]
102575
102501
-
Gln
CTG
[ENA]
¡û
>W1710579396
FPCI01000001
Gammaproteobacteria
Pseudoxanthomonas sp. YR558 [FPCI]
1543647
1543573
-
Gln
CTG
[ENA]
¡û
>W1710595295
FTLW01000001
Gammaproteobacteria
Lysobacter tolerans [FTLW]
100791
100865
+
Gln
CTG
[ENA]
¡û
>W1710601734
FUXP01000003
Gammaproteobacteria
Lysobacter spongiicola DSM 21749 [FUXP]
27957
27883
-
Gln
CTG
[ENA]
¡û
>W1710604285
FUZV01000002
Gammaproteobacteria
Pseudoxanthomonas indica [FUZV]
244697
244771
+
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK