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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
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Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.732540 (263 seq.)
>W1710869893
LMKB01000005
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
285120
285048
-
Val
GAC
[ENA]
¡û
>W1710871353
LMLG01000001
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
1063895
1063967
+
Val
GAC
[ENA]
¡û
>W1710872731
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
1068434
1068506
+
Val
GAC
[ENA]
¡û
>W1710873149
LMMO01000003
Actinomycetota
Frigoribacterium sp. Leaf263 [LMMO]
720627
720699
+
Val
GAC
[ENA]
¡û
>W1710876063
LMOX01000001
Actinomycetota
Frigoribacterium sp. Leaf164 [LMOX]
1303248
1303176
-
Val
GAC
[ENA]
¡û
>W1710876260
LMPB01000002
Actinomycetota
Frigoribacterium sp. Leaf172 [LMPB]
414531
414459
-
Val
GAC
[ENA]
¡û
>W1710876897
LMPQ01000001
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
287552
287480
-
Val
GAC
[ENA]
¡û
>W1710878112
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
1068250
1068322
+
Val
GAC
[ENA]
¡û
>W1711018555
LQXA01000023
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
37131
37205
+
Val
GAC
[ENA]
¡û
>W1711079606
LSOE01000006
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
318479
318405
-
Val
GAC
[ENA]
¡û
>W1711357180
MDHB01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHB]
293046
293120
+
Val
GAC
[ENA]
¡û
>W1711357237
MDHC01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHC]
2034164
2034090
-
Val
GAC
[ENA]
¡û
>W1711357290
MDHD01000417
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHD]
5804
5730
-
Val
GAC
[ENA]
¡û
>W1711357323
MDHE01000355
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHE]
5802
5728
-
Val
GAC
[ENA]
¡û
>W1711357365
MDHF01000206
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHF]
5787
5713
-
Val
GAC
[ENA]
¡û
>W1711357421
MDHG01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHG]
420453
420379
-
Val
GAC
[ENA]
¡û
>W1711357445
MDHH01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHH]
293046
293120
+
Val
GAC
[ENA]
¡û
>W1711357494
MDHI01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
1612123
1612049
-
Val
GAC
[ENA]
¡û
>W1711357552
MDHJ01000001
Actinomycetota
Clavibacter michiganensis [MDHJ]
2068237
2068163
-
Val
GAC
[ENA]
¡û
>W1711357576
MDHK01000023
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
224668
224594
-
Val
GAC
[ENA]
¡û
>W1711357642
MDHL01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHL]
2094620
2094546
-
Val
GAC
[ENA]
¡û
>W1711357686
MDHM01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHM]
2044405
2044331
-
Val
GAC
[ENA]
¡û
>W1711360718
MDJW01000012
Actinomycetota
Clavibacter michiganensis [MDJW]
38210
38284
+
Val
GAC
[ENA]
¡û
>W1711360748
MDJX01000141
Actinomycetota
Clavibacter michiganensis [MDJX]
5536
5610
+
Val
GAC
[ENA]
¡û
>W1711360808
MDJY01000058
Actinomycetota
Clavibacter michiganensis [MDJY]
31052
30978
-
Val
GAC
[ENA]
¡û
>W1711360822
MDJZ01000002
Actinomycetota
Clavibacter michiganensis [MDJZ]
22584
22510
-
Val
GAC
[ENA]
¡û
>W131208650
ATIA01000111
Actinomycetota
Leifsonia rubra CMS 76R [ATIA]
57378
57306
-
Val
GAC
[ENA]
¡û
>W1711461342
MJGS01000001
Actinomycetota
Frigoribacterium sp. MCBA15_019 [MJGS]
248588
248516
-
Val
GAC
[ENA]
¡û
>C006168
AM711867
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NCPPB 382 [AM711867]
2060165
2060091
-
Val
GAC
[Ensembl]
¡û
>w013989
AAOB01000016
Actinomycetota
marine actinobacterium PHSC20C1 [AAOB]
11692
11616
-
Val
GAC
[ENA]
¡û
>WENV180016045
FSTY01000310
[FSTY] metagenome; soil
124
196
+
Val
GAC
[ENA]
¡û
>WENV180016976
FSWJ01000120
[FSWJ] metagenome; soil
31243
31171
-
Val
GAC
[ENA]
¡û
>WENV180017297
FSWR01000068
[FSWR] metagenome; soil
116505
116577
+
Val
GAC
[ENA]
¡û
>WENV180023973
FTIF01005321
[FTIF] metagenome; soil
8424
8352
-
Val
GAC
[ENA]
¡û
>W141212791
AZQZ01000045
Actinomycetota
Clavibacter michiganensis michiganensis LMG 26808 [AZQZ]
180092
180166
+
Val
GAC
[ENA]
¡û
>C08003543
AM849034
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus ATCC 33113 [AM849034]
756314
756388
+
Val
GAC
[Ensembl]
¡û
>WENV170600722
FUWD010139888
[FUWD] metagenome; unknown
365
437
+
Val
GAC
[ENA]
¡û
>WENV170600813
FUWD010143792
[FUWD] metagenome; unknown
395
323
-
Val
GAC
[ENA]
¡û
>WENV170606237
FUWD010635218
[FUWD] metagenome; unknown
300
228
-
Val
GAC
[ENA]
¡û
>WENV170626317
FUWD013219083
[FUWD] metagenome; unknown
1365
1293
-
Val
GAC
[ENA]
¡û
>WENV170700622
LIDZ01015782
[LIDZ] food metagenome; wine grapes on drying loft during traditional withering process
1522
1594
+
Val
GAC
[ENA]
¡û
>C181002038
AP017457
Actinomycetota
Aurantimicrobium minutum KNC [AP017457]
524427
524499
+
Val
GAC
-
¡û
>C181048882
CP021034
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-3 [CP021034]
1365194
1365268
+
Val
GAC
-
¡û
>C181048949
CP021038
Actinomycetota
Clavibacter michiganensis subsp. insidiosus ATCC 10253 [CP021038]
1825969
1825895
-
Val
GAC
-
¡û
>C181092809
CP023994
Actinomycetota
Aurantimicrobium photophilum MWH-Mo1 [CP023994]
758378
758450
+
Val
GAC
-
¡û
>C181143956
CP026949
Actinomycetota
Mycetocola zhujimingii 449 [CP026949]
1591702
1591630
-
Val
GAC
-
¡û
>C181194480
CP030929
Actinomycetota
Aurantimicrobium sp. MWH-Uga1 [CP030929]
877816
877744
-
Val
GAC
-
¡û
>C191139355
CP035375
Actinomycetota
Salinibacterium sp. UTAS2018 [CP035375]
655652
655580
-
Val
GAC
-
¡û
>W141766589
JOEB01000003
Actinomycetota
Mycetocola saprophilus [JOEB]
529311
529237
-
Val
GAC
[ENA]
¡û
>W141766592
JOEB01000003
Actinomycetota
Mycetocola saprophilus [JOEB]
528676
528602
-
Val
GAC
[ENA]
¡û
>W141766609
JOEC01000001
Actinomycetota
Mycetocola saprophilus [JOEC]
712943
713017
+
Val
GAC
[ENA]
¡û
>W141766612
JOEC01000001
Actinomycetota
Mycetocola saprophilus [JOEC]
713578
713652
+
Val
GAC
[ENA]
¡û
>W1910839678
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2953289
2953363
+
Val
GAC
[ENA]
¡û
>W1910839714
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
2631154
2631228
+
Val
GAC
[ENA]
¡û
>W1910839748
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
1606766
1606840
+
Val
GAC
[ENA]
¡û
>W1910839796
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
2303961
2304035
+
Val
GAC
[ENA]
¡û
>W1910839841
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
2381808
2381882
+
Val
GAC
[ENA]
¡û
>W1911497902
OCST01000006
Actinomycetota
Salinibacterium xinjiangense CGMCC 1.05381 [OCST]
4064
4136
+
Val
GAC
[ENA]
¡û
>W1911748130
QWDZ01000002
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
5797
5723
-
Val
GAC
[ENA]
¡û
>W1911748191
QWEA01000224
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
722
796
+
Val
GAC
[ENA]
¡û
>W1911748232
QWEB01000050
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
5454
5528
+
Val
GAC
[ENA]
¡û
>W1911748286
QWEC01000072
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
5871
5797
-
Val
GAC
[ENA]
¡û
>W1911748312
QWED01000021
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
5474
5548
+
Val
GAC
[ENA]
¡û
>W1911748369
QWEE01000063
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
5812
5738
-
Val
GAC
[ENA]
¡û
>W1911749576
QWGS01000036
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
5424
5498
+
Val
GAC
[ENA]
¡û
>W1911749630
QWGT01000077
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
5851
5777
-
Val
GAC
[ENA]
¡û
>W1911749670
QWGU01000090
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
2341
2267
-
Val
GAC
[ENA]
¡û
>W1911749706
QWGV01000037
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5485
5559
+
Val
GAC
[ENA]
¡û
>W1810090202
PGFH01000001
Actinomycetota
Salinibacterium amurskyense DSM 16400 [PGFH]
1554404
1554476
+
Val
GAC
[ENA]
¡û
>SRA1003311
SRR002326.383702
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
43
117
+
Val
GAC
[SRA]
>SRA1003469
SRR002326.487866
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
211
139
-
Val
GAC
[SRA]
>W1810277225
PSTR01000001
Actinomycetota
Clavibacter michiganensis AY1B2 [PSTR]
275292
275218
-
Val
GAC
[ENA]
¡û
>W1810277285
PSTS01000008
Actinomycetota
Clavibacter michiganensis AY1A6 [PSTS]
71006
70932
-
Val
GAC
[ENA]
¡û
>W1810277424
PSTV01000018
Actinomycetota
Clavibacter michiganensis Z002 [PSTV]
30902
30828
-
Val
GAC
[ENA]
¡û
>W1810277474
PSTW01000021
Actinomycetota
Clavibacter michiganensis Z001 [PSTW]
273423
273349
-
Val
GAC
[ENA]
¡û
>W1810282075
PSXY01000006
Actinomycetota
Clavibacter michiganensis AY1B3 [PSXY]
71107
71033
-
Val
GAC
[ENA]
¡û
>W1810364692
PVTL01000001
Actinomycetota
Glaciihabitans tibetensis CGMCC 1.12484 [PVTL]
491946
492018
+
Val
GAC
[ENA]
¡û
>W1810476309
QANL01000004
Actinomycetota
Planctomonas deserti 13S1-3 [QANL]
276351
276279
-
Val
GAC
[ENA]
¡û
>W1810569041
QEFB01000001
Actinomycetota
Mycetocola zhujimingii 622 [QEFB]
277933
277861
-
Val
GAC
[ENA]
¡û
>W1810860797
QTTK01000002
Actinomycetota
Clavibacter sp. 199 [QTTK]
835520
835446
-
Val
GAC
[ENA]
¡û
>C151075665
CP011043
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-1 [CP011043]
1752675
1752601
-
Val
GAC
[Ensembl]
¡û
>C151095724
CP012573
Actinomycetota
Clavibacter capsici PF008 [CP012573]
1883517
1883443
-
Val
GAC
-
¡û
>W2010099869
BJUV01000005
Actinomycetota
Frigoribacterium faeni NBRC 103066 [BJUV]
67919
67991
+
Val
GAC
[ENA]
¡û
>W2010310563
CABWMD010000025
Actinomycetota
Frigoribacterium sp. 9N [CABWMD]
112299
112371
+
Val
GAC
[ENA]
¡û
>W2010498950
JAALGE010000003
Actinomycetota
Marisediminicola sp. SM7 A14 [JAALGE]
33966
33894
-
Val
GAC
[ENA]
¡û
>W2010534198
JAAOYV010000001
Actinomycetota
Frigoribacterium endophyticum AS3.20 [JAAOYV]
1176648
1176576
-
Val
GAC
[ENA]
¡û
>W2010534226
JAAOYW010000001
Actinomycetota
Frigoribacterium faeni AS3.2 [JAAOYW]
270093
270165
+
Val
GAC
[ENA]
¡û
>W2010609685
JABMLB010000001
Actinomycetota
Frigoribacterium sp. VKM Ac-2860 [JABMLB]
411005
410933
-
Val
GAC
[ENA]
¡û
>W2010610806
JABRPK010000001
Actinomycetota
Frigoribacterium sp. VKM Ac-2836 [JABRPK]
1040999
1041071
+
Val
GAC
[ENA]
¡û
>W2010691756
JACGWU010000001
Actinomycetota
Alpinimonas psychrophila DSM 23737 [JACGWU]
670590
670518
-
Val
GAC
[ENA]
¡û
>W2010691850
JACGWW010000001
Actinomycetota
Frigoribacterium faeni DSM 10309 [JACGWW]
1110409
1110481
+
Val
GAC
[ENA]
¡û
>W2010709746
JACHMJ010000001
Actinomycetota
Conyzicola lurida DSM 105784 [JACHMJ]
1627791
1627719
-
Val
GAC
[ENA]
¡û
>W2010929798
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2953289
2953363
+
Val
GAC
[ENA]
¡û
>W2010929834
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
2631154
2631228
+
Val
GAC
[ENA]
¡û
>W2010929868
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
1606766
1606840
+
Val
GAC
[ENA]
¡û
>W2010929916
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
2303961
2304035
+
Val
GAC
[ENA]
¡û
>W2010929961
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
2381808
2381882
+
Val
GAC
[ENA]
¡û
>W2011158806
OCST01000006
Actinomycetota
Salinibacterium xinjiangense CGMCC 1.05381 [OCST]
4064
4136
+
Val
GAC
[ENA]
¡û
>W2011269826
QLML01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP6885 [QLML]
182057
182131
+
Val
GAC
[ENA]
¡û
>W2011269896
QLMM01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7314 [QLMM]
209331
209257
-
Val
GAC
[ENA]
¡û
>W2011269906
QLMN01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7315 [QLMN]
38210
38284
+
Val
GAC
[ENA]
¡û
>W2011269980
QLMO01000006
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7316 [QLMO]
38494
38568
+
Val
GAC
[ENA]
¡û
>W2011270003
QLMP01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7488 [QLMP]
305363
305289
-
Val
GAC
[ENA]
¡û
>W2011270040
QLMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7568 [QLMQ]
182598
182672
+
Val
GAC
[ENA]
¡û
>W2011270083
QLMR01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7589 [QLMR]
38221
38295
+
Val
GAC
[ENA]
¡û
>W2011270133
QLMS01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ1811 [QLMS]
24013
23939
-
Val
GAC
[ENA]
¡û
>W2011270205
QLMT01000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ5026 [QLMT]
5515
5589
+
Val
GAC
[ENA]
¡û
>W2011270228
QLMU01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 14456 [QLMU]
313504
313430
-
Val
GAC
[ENA]
¡û
>W2011270268
QLMV01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1465 [QLMV]
609405
609331
-
Val
GAC
[ENA]
¡û
>W2011270316
QLMW01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1940 [QLMW]
38220
38294
+
Val
GAC
[ENA]
¡û
>W2011270384
QLMX01000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 10202 [QLMX]
5787
5713
-
Val
GAC
[ENA]
¡û
>W2011270410
QLMY01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2494 [QLMY]
209090
209016
-
Val
GAC
[ENA]
¡û
>W2011270445
QLMZ01000012
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2500 [QLMZ]
5844
5770
-
Val
GAC
[ENA]
¡û
>W2011270483
QLNA01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP5842 [QLNA]
134793
134719
-
Val
GAC
[ENA]
¡û
>W2011270526
QLNB01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7158 [QLNB]
187540
187614
+
Val
GAC
[ENA]
¡û
>W2011270572
QLNC01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7311 [QLNC]
38224
38298
+
Val
GAC
[ENA]
¡û
>W2011270613
QLND01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7312 [QLND]
38222
38296
+
Val
GAC
[ENA]
¡û
>W2011270687
QLNE01000101
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ARZ28 [QLNE]
5451
5525
+
Val
GAC
[ENA]
¡û
>W2011279207
QODA01000008
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ2541 [QODA]
38076
38150
+
Val
GAC
[ENA]
¡û
>W2011316473
QWDZ01000002
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
5797
5723
-
Val
GAC
[ENA]
¡û
>W2011316534
QWEA01000224
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
722
796
+
Val
GAC
[ENA]
¡û
>W2011316575
QWEB01000050
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
5454
5528
+
Val
GAC
[ENA]
¡û
>W2011316629
QWEC01000072
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
5871
5797
-
Val
GAC
[ENA]
¡û
>W2011316655
QWED01000021
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
5474
5548
+
Val
GAC
[ENA]
¡û
>W2011316712
QWEE01000063
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
5812
5738
-
Val
GAC
[ENA]
¡û
>W2011318821
QWGS01000036
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
5424
5498
+
Val
GAC
[ENA]
¡û
>W2011318875
QWGT01000077
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
5851
5777
-
Val
GAC
[ENA]
¡û
>W2011318915
QWGU01000090
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
2341
2267
-
Val
GAC
[ENA]
¡û
>W2011318951
QWGV01000037
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5485
5559
+
Val
GAC
[ENA]
¡û
>W2011403427
RCUV01000005
Actinomycetota
Mycetocola manganoxydans CCTCC AB209002 [RCUV]
295773
295701
-
Val
GAC
[ENA]
¡û
>W2011403562
RCUX01000018
Actinomycetota
Mycetocola tolaasinivorans IF 016277 [RCUX]
20838
20766
-
Val
GAC
[ENA]
¡û
>W2011403565
RCUX01000018
Actinomycetota
Mycetocola tolaasinivorans IF 016277 [RCUX]
19958
19886
-
Val
GAC
[ENA]
¡û
>W2011403595
RCUY01000008
Actinomycetota
Mycetocola lacteus JCM 11654 [RCUY]
17910
17982
+
Val
GAC
[ENA]
¡û
>W2011403598
RCUY01000008
Actinomycetota
Mycetocola lacteus JCM 11654 [RCUY]
18531
18605
+
Val
GAC
[ENA]
¡û
>W2011404154
RCWI01000002
Actinomycetota
Salinibacterium amurskyense JCM 12362 [RCWI]
524007
524079
+
Val
GAC
[ENA]
¡û
>W2011404189
RCWJ01000001
Actinomycetota
Mycetocola zhadangensis ZD1-4 [RCWJ]
916472
916544
+
Val
GAC
[ENA]
¡û
>W2011410817
RDQV01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus CFBP 2404 [RDQV]
341987
341913
-
Val
GAC
[ENA]
¡û
>W2011410891
RDQW01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP 4999 [RDQW]
209152
209078
-
Val
GAC
[ENA]
¡û
>W2011433968
RJKU01000001
Actinomycetota
Frigoribacterium sp. PhB107 [RJKU]
475648
475720
+
Val
GAC
[ENA]
¡û
>W2011448524
RKIC01000009
Actinomycetota
Frigoribacterium sp. PhB24 [RKIC]
416354
416282
-
Val
GAC
[ENA]
¡û
>W2011448575
RKID01000001
Actinomycetota
Frigoribacterium sp. PhB118 [RKID]
435535
435463
-
Val
GAC
[ENA]
¡û
>W2011448621
RKIE01000001
Actinomycetota
Frigoribacterium sp. PhB160 [RKIE]
1478018
1477946
-
Val
GAC
[ENA]
¡û
>W2011539465
SCNU01000001
Actinomycetota
Microbacteriaceae bacterium 3R27F9-B [SCNU]
47363
47435
+
Val
GAC
[ENA]
¡û
>W2011600628
SISG01000001
Actinomycetota
Glaciihabitans sp. RP-3-7 [SISG]
1040914
1040842
-
Val
GAC
[ENA]
¡û
>W2011604807
SJEV01000002
Actinomycetota
Microbacteriaceae bacterium J5903 [SJEV]
395973
395901
-
Val
GAC
[ENA]
¡û
>W2011654559
SOBE01000001
Actinomycetota
Frigoribacterium sp. PhB116 [SOBE]
480532
480604
+
Val
GAC
[ENA]
¡û
>W2012022997
VFRA01000001
Actinomycetota
Rhodoglobus vestalii DSM 21947 [VFRA]
15627
15699
+
Val
GAC
[ENA]
¡û
>W2012105195
VOLO01000001
Actinomycetota
Frigoribacterium sp. ACAM 257 [VOLO]
919264
919192
-
Val
GAC
[ENA]
¡û
>W2012125074
VRMG01000004
Actinomycetota
Glaciihabitans sp. CHu50b-6-2 [VRMG]
346027
345955
-
Val
GAC
[ENA]
¡û
>W2012433322
WTCS01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis OP3 [WTCS]
1947250
1947176
-
Val
GAC
[ENA]
¡û
>W2110021315
BMEK01000001
Actinomycetota
Mycetocola zhadangensis CGMCC 1.12042 [BMEK]
915010
915082
+
Val
GAC
[ENA]
¡û
>W2110023523
BMGB01000001
Actinomycetota
Conyzicola nivalis CGMCC 1.12813 [BMGB]
928826
928754
-
Val
GAC
[ENA]
¡û
>W2110029913
BMLC01000001
Actinomycetota
Salinibacterium xinjiangense CGMCC 1.5381 [BMLC]
210447
210375
-
Val
GAC
[ENA]
¡û
>W2110047690
BMXM01000001
Actinomycetota
Mycetocola manganoxydans KCTC 19753 [BMXM]
306375
306447
+
Val
GAC
[ENA]
¡û
>W2110050875
BMZU01000001
Actinomycetota
Salinibacterium amurskyense KCTC 9931 [BMZU]
347513
347441
-
Val
GAC
[ENA]
¡û
>W2110159707
JAATPM010000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 1217 [JAATPM]
5684
5610
-
Val
GAC
[ENA]
¡û
>W2110161115
JAAVUZ010000003
Actinomycetota
Glaciihabitans sp. dw_435 [JAAVUZ]
121455
121527
+
Val
GAC
[ENA]
¡û
>W2110271953
JACVMV010000001
Actinomycetota
Leucobacter sp. cx-87 [JACVMV]
259599
259525
-
Val
GAC
[ENA]
¡û
>W2110271956
JACVMV010000001
Actinomycetota
Leucobacter sp. cx-87 [JACVMV]
257991
257919
-
Val
GAC
[ENA]
¡û
>W2110271995
JACVMW010000004
Actinomycetota
Leucobacter sp. cx-169 [JACVMW]
81964
82038
+
Val
GAC
[ENA]
¡û
>W2110271998
JACVMW010000004
Actinomycetota
Leucobacter sp. cx-169 [JACVMW]
83572
83644
+
Val
GAC
[ENA]
¡û
>W2110290193
JACYTX010000002
Actinomycetota
Frigoribacterium sp. CFBP 8766 CFBP8766 [JACYTX]
463828
463900
+
Val
GAC
[ENA]
¡û
>W2110290404
JACYUB010000003
Actinomycetota
Frigoribacterium sp. CFBP 8751 CFBP8751 [JACYUB]
135222
135294
+
Val
GAC
[ENA]
¡û
>W2110290661
JACYUH010000002
Actinomycetota
Frigoribacterium sp. CFBP 8759 CFBP8759 [JACYUH]
603275
603347
+
Val
GAC
[ENA]
¡û
>W2110290812
JACYUO010000001
Actinomycetota
Frigoribacterium sp. CFBP 8754 CFBP8754 [JACYUO]
1016402
1016330
-
Val
GAC
[ENA]
¡û
>W2110290956
JACYUR010000001
Actinomycetota
Frigoribacterium sp. CFBP 13729 CFBP13729 [JACYUR]
451386
451458
+
Val
GAC
[ENA]
¡û
>W2110291659
JACYVH010000003
Actinomycetota
Frigoribacterium sp. CFBP 13712 CFBP13712 [JACYVH]
77980
78052
+
Val
GAC
[ENA]
¡û
>W2110291772
JACYVL010000003
Actinomycetota
Frigoribacterium sp. CFBP 13707 CFBP13707 [JACYVL]
398841
398913
+
Val
GAC
[ENA]
¡û
>W2110328862
JADKRO010000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VKM Ac-1790 [JADKRO]
844026
843952
-
Val
GAC
[ENA]
¡û
>W2110328927
JADKRP010000002
Actinomycetota
Clavibacter michiganensis subsp. phaseoli VKM Ac-2886 [JADKRP]
175143
175069
-
Val
GAC
[ENA]
¡û
>W2110328937
JADKRQ010000001
Actinomycetota
Clavibacter sp. VKM Ac-2542 [JADKRQ]
175088
175162
+
Val
GAC
[ENA]
¡û
>W2110328998
JADKRR010000001
Actinomycetota
Clavibacter sp. VKM Ac-2872 [JADKRR]
1980394
1980320
-
Val
GAC
[ENA]
¡û
>W2110329024
JADKRS010000001
Actinomycetota
Clavibacter sp. VKM Ac-2873 [JADKRS]
28154
28228
+
Val
GAC
[ENA]
¡û
>W2110329549
JADKSD010000001
Actinomycetota
Frigoribacterium sp. VKM Ac-1396 [JADKSD]
444874
444802
-
Val
GAC
[ENA]
¡û
>W2110329579
JADKSE010000001
Actinomycetota
Frigoribacterium sp. VKM Ac-2530 [JADKSE]
454148
454220
+
Val
GAC
[ENA]
¡û
>W2110363677
JADOVH010000003
Actinomycetota
Frigoribacterium sp. CG_9.8 [JADOVH]
102713
102785
+
Val
GAC
[ENA]
¡û
>W2110397099
JADYWE010000001
Actinomycetota
Salinibacterium sp. NK8237 [JADYWE]
375481
375409
-
Val
GAC
[ENA]
¡û
>W2110397141
JADYWF010000001
Actinomycetota
Salinibacterium sp. NG253 [JADYWF]
358272
358200
-
Val
GAC
[ENA]
¡û
>W2110397183
JADYWG010000001
Actinomycetota
Salinibacterium sp. NG22 [JADYWG]
379842
379770
-
Val
GAC
[ENA]
¡û
>W2110397211
JADYWH010000001
Actinomycetota
Salinibacterium sp. NSLL17 [JADYWH]
1599708
1599780
+
Val
GAC
[ENA]
¡û
>W2110397253
JADYWI010000001
Actinomycetota
Salinibacterium sp. NSLL150 [JADYWI]
1600132
1600204
+
Val
GAC
[ENA]
¡û
>W2110397295
JADYWJ010000001
Actinomycetota
Salinibacterium sp. NSLL16 [JADYWJ]
1600132
1600204
+
Val
GAC
[ENA]
¡û
>W2110397338
JADYWK010000001
Actinomycetota
Salinibacterium sp. NSLL35 [JADYWK]
1600132
1600204
+
Val
GAC
[ENA]
¡û
>W2110398010
JADYWT010000001
Actinomycetota
Salinibacterium sp. SWN1162 [JADYWT]
1678835
1678907
+
Val
GAC
[ENA]
¡û
>W2110398052
JADYWU010000001
Actinomycetota
Salinibacterium sp. SWN167 [JADYWU]
1694777
1694849
+
Val
GAC
[ENA]
¡û
>W2110398104
JADYWV010000002
Actinomycetota
Salinibacterium sp. SWN139 [JADYWV]
593687
593759
+
Val
GAC
[ENA]
¡û
>W2110398136
JADYWW010000001
Actinomycetota
Salinibacterium sp. SWN248 [JADYWW]
1660022
1660094
+
Val
GAC
[ENA]
¡û
>W2110438059
JAEPES010000001
Actinomycetota
Lacisediminihabitans changchengi G11-30 [JAEPES]
808640
808712
+
Val
GAC
[ENA]
¡û
>W2110438080
JAEPES010000003
Actinomycetota
Lacisediminihabitans changchengi G11-30 [JAEPES]
525619
525547
-
Val
GAC
[ENA]
¡û
>W2110457633
JAFBBI010000001
Actinomycetota
Clavibacter michiganensis PvP097 [JAFBBI]
1217667
1217741
+
Val
GAC
[ENA]
¡û
>W2110457704
JAFBBJ010000001
Actinomycetota
Clavibacter michiganensis PvP098 [JAFBBJ]
919231
919157
-
Val
GAC
[ENA]
¡û
>W2110491966
JAFEUE010000022
Actinomycetota
Clavibacter zhangzhiyongii DM3 [JAFEUE]
8616
8542
-
Val
GAC
[ENA]
¡û
>W2110499355
JAFIBM010000001
Actinomycetota
Frigoribacterium sp. PvP032 [JAFIBM]
1932736
1932664
-
Val
GAC
[ENA]
¡û
>W2110499599
JAFIBR010000001
Actinomycetota
Frigoribacterium sp. PvP121 [JAFIBR]
2300171
2300099
-
Val
GAC
[ENA]
¡û
>W2110503952
JAFIRI010000001
Actinomycetota
Leucobacter sp. CX87 [JAFIRI]
259599
259525
-
Val
GAC
[ENA]
¡û
>W2110503955
JAFIRI010000001
Actinomycetota
Leucobacter sp. CX87 [JAFIRI]
257991
257919
-
Val
GAC
[ENA]
¡û
>W2110554425
JAGIOV010000001
Actinomycetota
Clavibacter michiganensis PvP036 [JAGIOV]
2353981
2353907
-
Val
GAC
[ENA]
¡û
>W2110599803
JAHEWV010000014
Actinomycetota
Clavibacter michiganensis CFBP 3399 [JAHEWV]
46903
46977
+
Val
GAC
[ENA]
¡û
>C201055752
CP033723
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 61-1 [CP033723]
1890645
1890571
-
Val
GAC
-
¡û
>C211052093
CP040814
Actinomycetota
Salinibacterium sp. M195 [CP040814]
1899235
1899308
+
Val
GAC
-
¡û
>C211052986
CP041635
Actinomycetota
Mycetocola sp. JXN-3 [CP041635]
1894208
1894134
-
Val
GAC
-
¡û
>C211052989
CP041635
Actinomycetota
Mycetocola sp. JXN-3 [CP041635]
1893557
1893485
-
Val
GAC
-
¡û
>C211060510
CP043650
Actinomycetota
Frigoribacterium sp. NBH87 [CP043650]
311681
311609
-
Val
GAC
-
¡û
>C211060596
CP043653
Actinomycetota
Glaciihabitans sp. INWT7 [CP043653]
1726180
1726108
-
Val
GAC
-
¡û
>C211144365
CP061274
Actinomycetota
Clavibacter sp. DM1 [CP061274]
1930645
1930571
-
Val
GAC
-
¡û
>C211283650
CP071051
Actinomycetota
Leucobacter sp. CX169 [CP071051]
1382500
1382426
-
Val
GAC
-
¡û
>C211283653
CP071051
Actinomycetota
Leucobacter sp. CX169 [CP071051]
1380892
1380820
-
Val
GAC
-
¡û
>C211344388
CP076349
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ28 [CP076349]
1962767
1962693
-
Val
GAC
-
¡û
>C211344432
CP076352
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ143 [CP076352]
1947255
1947181
-
Val
GAC
-
¡û
>C231046715
CP040786
Actinomycetota
Clavibacter phaseoli LPPA 982 [CP040786]
868433
868507
+
Val
GAC
-
¡û
>C231046790
CP040788
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [CP040788]
1180381
1180307
-
Val
GAC
-
¡û
>C231046826
CP040792
Actinomycetota
Clavibacter californiensis CFBP 8216 [CP040792]
2394792
2394718
-
Val
GAC
-
¡û
>C231046848
CP040795
Actinomycetota
Clavibacter phaseoli CFBP 8217 [CP040795]
992417
992491
+
Val
GAC
-
¡û
>C231046886
CP040797
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis A6096 [CP040797]
144127
144201
+
Val
GAC
-
¡û
>C231064286
CP053437
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A5747* [CP053437]
1658798
1658872
+
Val
GAC
-
¡û
>C231065127
CP053860
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A4758 [CP053860]
2449388
2449462
+
Val
GAC
-
¡û
>C231165005
CP080203
Actinomycetota
Mycetocola spongiae MSC19 [CP080203]
480042
480116
+
Val
GAC
-
¡û
>C231165008
CP080203
Actinomycetota
Mycetocola spongiae MSC19 [CP080203]
488527
488600
+
Val
GAC
-
¡û
>C231166314
CP080437
Actinomycetota
Clavibacter michiganensis LMG7333 [CP080437]
1058101
1058027
-
Val
GAC
-
¡û
>C231180672
CP083439
Actinomycetota
Clavibacter sp. A6099 [CP083439]
2004893
2004819
-
Val
GAC
-
¡û
>C231203736
CP085106
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM84 [CP085106]
2034538
2034464
-
Val
GAC
-
¡û
>C231203980
CP085137
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM09 [CP085137]
2034528
2034454
-
Val
GAC
-
¡û
>C231204024
CP085140
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM39 [CP085140]
2034534
2034460
-
Val
GAC
-
¡û
>C231226857
CP086345
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CNK-2 [CP086345]
1890643
1890569
-
Val
GAC
-
¡û
>C231226901
CP086346
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 44 [CP086346]
1908644
1908570
-
Val
GAC
-
¡û
>C231226945
CP086348
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis SL1 [CP086348]
1890867
1890793
-
Val
GAC
-
¡û
>C231226989
CP086349
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CIBA [CP086349]
1890690
1890616
-
Val
GAC
-
¡û
>C231227033
CP086350
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 419B [CP086350]
1909024
1908950
-
Val
GAC
-
¡û
>C231252410
CP088266
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus K496 [CP088266]
2475041
2474967
-
Val
GAC
-
¡û
>C231359433
CP095274
Actinomycetota
Clavibacter michiganensis subsp. michiganensis N.P. [CP095274]
2075344
2075270
-
Val
GAC
-
¡û
>W2110768336
SISU01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 0317 [SISU]
615463
615389
-
Val
GAC
[ENA]
¡û
>C231601457
CP117773
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM04 [CP117773]
2034528
2034454
-
Val
GAC
-
¡û
>C231601501
CP117776
Actinomycetota
Clavibacter michiganensis subsp. michiganensis Cmm_21 [CP117776]
2034546
2034472
-
Val
GAC
-
¡û
>C241011903
AP027732
Actinomycetota
Frondihabitans sucicola NBRC 108728 [AP027732]
2782329
2782401
+
Val
GAC
-
¡û
>C241017604
CP017146
Actinomycetota
Marisediminicola antarctica ZS314 [CP017146]
2170724
2170796
+
Val
GAC
-
¡û
>C241040278
CP033721
Actinomycetota
Clavibacter nebraskensis HF4 [CP033721]
1890829
1890755
-
Val
GAC
-
¡û
>C241040322
CP033722
Actinomycetota
Clavibacter nebraskensis 7580 [CP033722]
1890638
1890564
-
Val
GAC
-
¡û
>C241040366
CP033724
Actinomycetota
Clavibacter michiganensis subsp. michiganensis UF1 [CP033724]
2034546
2034472
-
Val
GAC
-
¡û
>C241115396
CP047051
Actinomycetota
Clavibacter michiganensis subsp. michiganensis MSF322 [CP047051]
2053145
2053071
-
Val
GAC
-
¡û
>C241115441
CP047054
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VL527 [CP047054]
2081565
2081491
-
Val
GAC
-
¡û
>C241127502
CP048045
Actinomycetota
Clavibacter capsici 1207 [CP048045]
1942428
1942354
-
Val
GAC
-
¡û
>C241127547
CP048047
Actinomycetota
Clavibacter capsici 1106 [CP048047]
1880353
1880279
-
Val
GAC
-
¡û
>C241127591
CP048049
Actinomycetota
Clavibacter capsici 1101 [CP048049]
1883556
1883482
-
Val
GAC
-
¡û
>W2130018257
JACYNS010000017
Actinomycetota
Frigoribacterium sp. CFBP 13605 CFBP13605 [JACYNS]
810
738
-
Val
GAC
[ENA]
¡û
>W1511352440
JROD01000005
Actinomycetota
Clavibacter michiganensis CF11 [JROD]
130786
130712
-
Val
GAC
[ENA]
¡û
>W1511509359
JXQZ01000001
Actinomycetota
Frigoribacterium sp. MEB024 [JXQZ]
147824
147896
+
Val
GAC
[ENA]
¡û
>W1511570099
LAKL01000017
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis DOAB 397 [LAKL]
82940
82866
-
Val
GAC
[ENA]
¡û
>W121043542
AHWA01000002
Actinomycetota
Salinibacterium sp. PAMC 21357 [AHWA]
392587
392515
-
Val
GAC
[ENA]
¡û
>C131019555
HE614873
Actinomycetota
Clavibacter nebraskensis NCPPB 2581 type strain: NCPPB 2581 [HE614873]
1890283
1890209
-
Val
GAC
[Ensembl]
¡û
>W1610620610
LHOZ01000065
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
59240
59312
+
Val
GAC
[ENA]
¡û
>W1610732239
LMKB01000005
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
285120
285048
-
Val
GAC
[ENA]
¡û
>W1610733699
LMLG01000001
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
1063895
1063967
+
Val
GAC
[ENA]
¡û
>W1610735077
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
1068434
1068506
+
Val
GAC
[ENA]
¡û
>W1610735495
LMMO01000003
Actinomycetota
Frigoribacterium sp. Leaf263 [LMMO]
720627
720699
+
Val
GAC
[ENA]
¡û
>W1610738409
LMOX01000001
Actinomycetota
Frigoribacterium sp. Leaf164 [LMOX]
1303248
1303176
-
Val
GAC
[ENA]
¡û
>W1610738606
LMPB01000002
Actinomycetota
Frigoribacterium sp. Leaf172 [LMPB]
414531
414459
-
Val
GAC
[ENA]
¡û
>W1610739243
LMPQ01000001
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
287552
287480
-
Val
GAC
[ENA]
¡û
>W1610740458
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
1068250
1068322
+
Val
GAC
[ENA]
¡û
>W1610867031
LQXA01000023
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
37131
37205
+
Val
GAC
[ENA]
¡û
>W1610918516
LSOE01000006
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
318479
318405
-
Val
GAC
[ENA]
¡û
>W1710570930
FOVM01000007
Actinomycetota
Mycetocola miduiensis [FOVM]
20950
20878
-
Val
GAC
[ENA]
¡û
>W1710604658
FVZG01000001
Actinomycetota
Clavibacter michiganensis [FVZG]
1835079
1835005
-
Val
GAC
[ENA]
¡û
>W1710748304
LHOZ01000065
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
59240
59312
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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