This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.734487 (251 seq.)
>W1710776052
LIZH01001789
Betaproteobacteria
Duganella sp. Ant L27C-9 [LIZH]
420
494
+
Thr
GGT
[ENA]
¡û
>W1710871785
LMLM01000023
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
165350
165424
+
Thr
GGT
[ENA]
¡û
>W1710871821
LMLM01000031
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
89782
89856
+
Thr
GGT
[ENA]
¡û
>W1710874779
LMNW01000033
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
221047
221121
+
Thr
GGT
[ENA]
¡û
>W1710874783
LMNW01000033
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
440
366
-
Thr
GGT
[ENA]
¡û
>W1710875436
LMOJ01000023
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
66085
66159
+
Thr
GGT
[ENA]
¡û
>W1710893492
LNEU01000033
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
330
256
-
Thr
GGT
[ENA]
¡û
>W1711033342
LRHV01000010
Betaproteobacteria
Duganella sp. HH105 [LRHV]
75065
75139
+
Thr
GGT
[ENA]
¡û
>W1711033345
LRHV01000011
Betaproteobacteria
Duganella sp. HH105 [LRHV]
50373
50299
-
Thr
GGT
[ENA]
¡û
>W1711046606
LROM01000050
Betaproteobacteria
Duganella phyllosphaerae [LROM]
435
361
-
Thr
GGT
[ENA]
¡û
>W1711046629
LROM01000116
Betaproteobacteria
Duganella phyllosphaerae [LROM]
21756
21830
+
Thr
GGT
[ENA]
¡û
>W1711046659
LRON01000003
Betaproteobacteria
Duganella sp. HH101 [LRON]
382036
381962
-
Thr
GGT
[ENA]
¡û
>W1711046685
LRON01000014
Betaproteobacteria
Duganella sp. HH101 [LRON]
1137
1063
-
Thr
GGT
[ENA]
¡û
>C171130507
LT671418
Betaproteobacteria
Herminiimonas arsenitoxidans AS8 [LT671418]
2757180
2757254
+
Thr
GGT
-
¡û
>W131050080
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
693778
693852
+
Thr
GGT
[ENA]
¡û
>W131050111
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
345918
345844
-
Thr
GGT
[ENA]
¡û
>W131176155
ARJV01000010
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
107141
107215
+
Thr
GGT
[ENA]
¡û
>W131176161
ARJV01000017
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
147302
147376
+
Thr
GGT
[ENA]
¡û
>W131179093
ARMC01000023
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
82742
82668
-
Thr
GGT
[ENA]
¡û
>W131179096
ARMC01000024
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
106233
106307
+
Thr
GGT
[ENA]
¡û
>C010371
CU207211
Betaproteobacteria
Herminiimonas arsenicoxydans [CU207211]
3138158
3138084
-
Thr
GGT
[Ensembl]
¡û
>C011135
CP000269
Betaproteobacteria
Janthinobacterium sp. Marseille [CP000269]
3803664
3803590
-
Thr
GGT
[Ensembl]
¡û
>WENV180016456
FSUZ01000037
[FSUZ] metagenome; soil
1023
949
-
Thr
GGT
[ENA]
¡û
>WENV180017542
FSXF01000451
[FSXF] metagenome; soil
306
232
-
Thr
GGT
[ENA]
¡û
>WENV180018312
FSYV01000510
[FSYV] metagenome; soil
33524
33598
+
Thr
GGT
[ENA]
¡û
>WENV180031794
FTJS01087646
[FTJS] metagenome; soil
118
44
-
Thr
GGT
[ENA]
¡û
>WENV180032877
FTKD01002429
[FTKD] metagenome; soil
23909
23835
-
Thr
GGT
[ENA]
¡û
>WENV180036159
FTLB01484286
[FTLB] metagenome; soil
1
75
+
Thr
GGT
[ENA]
¡û
>WENV181385555
OFRI01122735
[OFRI] wastewater metagenome; Exp Tend VB 90WW
303
229
-
Thr
GGT
[ENA]
¡û
>WENV183697811
OUNK010144574
[OUNK] metagenome; soil
265
191
-
Thr
GGT
[ENA]
¡û
>WENV183697878
OUNK010228191
[OUNK] metagenome; soil
433
507
+
Thr
GGT
[ENA]
¡û
>WENV170558047
CXWL01047338
[CXWL] groundwater metagenome; biofilm material
214
140
-
Thr
GGT
[ENA]
¡û
>WENV170558451
CXWL01071333
[CXWL] groundwater metagenome; biofilm material
5077
5151
+
Thr
GGT
[ENA]
¡û
>WENV170558601
CXWL01080223
[CXWL] groundwater metagenome; biofilm material
16953
17027
+
Thr
GGT
[ENA]
¡û
>WENV170558902
CXWL01098881
[CXWL] groundwater metagenome; biofilm material
20501
20575
+
Thr
GGT
[ENA]
¡û
>WENV170559152
CXWL01112071
[CXWL] groundwater metagenome; biofilm material
3144
3070
-
Thr
GGT
[ENA]
¡û
>WENV170559185
CXWL01113406
[CXWL] groundwater metagenome; biofilm material
8450
8376
-
Thr
GGT
[ENA]
¡û
>WENV170559194
CXWL01113704
[CXWL] groundwater metagenome; biofilm material
345
271
-
Thr
GGT
[ENA]
¡û
>WENV170559215
CXWL01114617
[CXWL] groundwater metagenome; biofilm material
211
137
-
Thr
GGT
[ENA]
¡û
>WENV170559443
CXWL01123819
[CXWL] groundwater metagenome; biofilm material
7979
7905
-
Thr
GGT
[ENA]
¡û
>WENV170559515
CXWL01126903
[CXWL] groundwater metagenome; biofilm material
3238
3312
+
Thr
GGT
[ENA]
¡û
>WENV170559588
CXWL01131656
[CXWL] groundwater metagenome; biofilm material
1216
1290
+
Thr
GGT
[ENA]
¡û
>WENV170559656
CXWL01135144
[CXWL] groundwater metagenome; biofilm material
544
470
-
Thr
GGT
[ENA]
¡û
>WENV170708874
LNFM01000012
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
178579
178653
+
Thr
GGT
[ENA]
¡û
>C181102657
CP024608
Betaproteobacteria
Massilia violaceinigra B2 [CP024608]
794313
794387
+
Thr
GGT
-
¡û
>C181102728
CP024608
Betaproteobacteria
Massilia violaceinigra B2 [CP024608]
474268
474194
-
Thr
GGT
-
¡û
>C191138956
CP035311
Betaproteobacteria
Janthinobacterium sp. 17J80-10 [CP035311]
2503
2429
-
Thr
GGT
-
¡û
>C191150800
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
6836794
6836868
+
Thr
GGT
-
¡û
>C191150813
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
6539721
6539647
-
Thr
GGT
-
¡û
>C191157300
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
3573938
3574012
+
Thr
GGT
-
¡û
>C191157305
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
4138666
4138740
+
Thr
GGT
-
¡û
>C191173969
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
5333883
5333957
+
Thr
GGT
-
¡û
>C191173997
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
5078809
5078735
-
Thr
GGT
-
¡û
>W1910700070
MESE01000010
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
294
220
-
Thr
GGT
[ENA]
¡û
>W1911647596
QAJP01000003
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
218
144
-
Thr
GGT
[ENA]
¡û
>W1911802841
QYUP01000058
Betaproteobacteria
Massilia sp. K1S02-61 [QYUP]
2921
2995
+
Thr
GGT
[ENA]
¡û
>W1911802855
QYUP01000111
Betaproteobacteria
Massilia sp. K1S02-61 [QYUP]
64883
64957
+
Thr
GGT
[ENA]
¡û
>W1911802910
QYUQ01000002
Betaproteobacteria
Noviherbaspirillum sp. K1S02-23 [QYUQ]
2800540
2800466
-
Thr
GGT
[ENA]
¡û
>W1810062364
PDOB01000013
Betaproteobacteria
Massilia psychrophila JCM 30813 [PDOB]
65480
65554
+
Thr
GGT
[ENA]
¡û
>W1810062395
PDOB01000046
Betaproteobacteria
Massilia psychrophila JCM 30813 [PDOB]
27308
27382
+
Thr
GGT
[ENA]
¡û
>W1810062406
PDOC01000001
Betaproteobacteria
Massilia eurypsychrophila JCM 30074 [PDOC]
366086
366012
-
Thr
GGT
[ENA]
¡û
>W1810062453
PDOC01000029
Betaproteobacteria
Massilia eurypsychrophila JCM 30074 [PDOC]
54367
54441
+
Thr
GGT
[ENA]
¡û
>W1810068693
PDZP01000001
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
175955
176029
+
Thr
GGT
[ENA]
¡û
>W1810068733
PDZP01000008
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
14558
14632
+
Thr
GGT
[ENA]
¡û
>SRA1003169
SRR002326.267705
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
101
27
-
Thr
GGT
[SRA]
>W1810297201
PTLZ01000001
Betaproteobacteria
Herminiimonas fonticola S-94 [PTLZ]
421827
421901
+
Thr
GGT
[ENA]
¡û
>W1810387699
PXWF02000019
Betaproteobacteria
Massilia glaciei B448-2 [PXWF]
22978
23052
+
Thr
GGT
[ENA]
¡û
>W1810387718
PXWF02000097
Betaproteobacteria
Massilia glaciei B448-2 [PXWF]
8575
8649
+
Thr
GGT
[ENA]
¡û
>W1810672457
QJTL01000002
Betaproteobacteria
Duganella sp. GV083 [QJTL]
760108
760182
+
Thr
GGT
[ENA]
¡û
>W1810672463
QJTL01000002
Betaproteobacteria
Duganella sp. GV083 [QJTL]
461318
461244
-
Thr
GGT
[ENA]
¡û
>W1810677165
QKMN01000002
Betaproteobacteria
Duganella sp. GV053 [QKMN]
760108
760182
+
Thr
GGT
[ENA]
¡û
>W1810677171
QKMN01000002
Betaproteobacteria
Duganella sp. GV053 [QKMN]
461318
461244
-
Thr
GGT
[ENA]
¡û
>W1810693401
QLLJ01000002
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
760108
760182
+
Thr
GGT
[ENA]
¡û
>W1810693407
QLLJ01000002
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
461318
461244
-
Thr
GGT
[ENA]
¡û
>W1810694363
QLLZ01000002
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
760108
760182
+
Thr
GGT
[ENA]
¡û
>W1810694369
QLLZ01000002
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
461318
461244
-
Thr
GGT
[ENA]
¡û
>W1810787962
QREC01000002
Betaproteobacteria
Duganella sp. GV023 [QREC]
749428
749502
+
Thr
GGT
[ENA]
¡û
>W1810787969
QREC01000002
Betaproteobacteria
Duganella sp. GV023 [QREC]
450443
450369
-
Thr
GGT
[ENA]
¡û
>W1810885059
QUNB01000002
Betaproteobacteria
Duganella sp. GV032 [QUNB]
760498
760572
+
Thr
GGT
[ENA]
¡û
>W1810885065
QUNB01000002
Betaproteobacteria
Duganella sp. GV032 [QUNB]
461513
461439
-
Thr
GGT
[ENA]
¡û
>W1810885178
QUND01000002
Betaproteobacteria
Duganella sp. GV046 [QUND]
760498
760572
+
Thr
GGT
[ENA]
¡û
>W1810885184
QUND01000002
Betaproteobacteria
Duganella sp. GV046 [QUND]
461513
461439
-
Thr
GGT
[ENA]
¡û
>W1810885812
QUNP01000002
Betaproteobacteria
Duganella sp. GV038 [QUNP]
760498
760572
+
Thr
GGT
[ENA]
¡û
>W1810885818
QUNP01000002
Betaproteobacteria
Duganella sp. GV038 [QUNP]
461513
461439
-
Thr
GGT
[ENA]
¡û
>W1810886069
QUNU01000003
Betaproteobacteria
Duganella sp. GV067 [QUNU]
239886
239960
+
Thr
GGT
[ENA]
¡û
>W1810886118
QUNU01000007
Betaproteobacteria
Duganella sp. GV067 [QUNU]
461513
461439
-
Thr
GGT
[ENA]
¡û
>W1810908332
QVIO01000005
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
248931
249005
+
Thr
GGT
[ENA]
¡û
>W1810908345
QVIO01000013
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
106253
106327
+
Thr
GGT
[ENA]
¡û
>W1810908397
QVIP01000005
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
206253
206327
+
Thr
GGT
[ENA]
¡û
>W1810908414
QVIP01000015
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
106254
106328
+
Thr
GGT
[ENA]
¡û
>W2010450935
JAADJT010000001
Betaproteobacteria
Duganella sp. SAP-35 [JAADJT]
923942
923868
-
Thr
GGT
[ENA]
¡û
>W2010450989
JAADJT010000013
Betaproteobacteria
Duganella sp. SAP-35 [JAADJT]
194715
194789
+
Thr
GGT
[ENA]
¡û
>W2010609405
JABMJJ010000004
Betaproteobacteria
Rugamonas sp. SG757 [JABMJJ]
343633
343707
+
Thr
GGT
[ENA]
¡û
>W2010630620
JABTBR010000036
Betaproteobacteria
Oxalobacteraceae bacterium BJB404 [JABTBR]
7024
7098
+
Thr
GGT
[ENA]
¡û
>W2010630642
JABTBR010000095
Betaproteobacteria
Oxalobacteraceae bacterium BJB404 [JABTBR]
11743
11817
+
Thr
GGT
[ENA]
¡û
>W2010695121
JACHBX010000002
Betaproteobacteria
Massilia aurea AT3.2 [JACHBX]
692008
692082
+
Thr
GGT
[ENA]
¡û
>W2010717008
JACHXS010000010
Betaproteobacteria
Massilia umbonata CECT 7753 [JACHXS]
255387
255461
+
Thr
GGT
[ENA]
¡û
>W2010717013
JACHXS010000010
Betaproteobacteria
Massilia umbonata CECT 7753 [JACHXS]
420
346
-
Thr
GGT
[ENA]
¡û
>W2010833496
MESE01000010
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
294
220
-
Thr
GGT
[ENA]
¡û
>W2011235580
QAJP01000003
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
218
144
-
Thr
GGT
[ENA]
¡û
>W2011344472
QYUP01000058
Betaproteobacteria
Massilia sp. K1S02-61 [QYUP]
2921
2995
+
Thr
GGT
[ENA]
¡û
>W2011344486
QYUP01000111
Betaproteobacteria
Massilia sp. K1S02-61 [QYUP]
64883
64957
+
Thr
GGT
[ENA]
¡û
>W2011344541
QYUQ01000002
Betaproteobacteria
Noviherbaspirillum sp. K1S02-23 [QYUQ]
2800540
2800466
-
Thr
GGT
[ENA]
¡û
>W2011404561
RCWV01000002
Betaproteobacteria
Duganella sp. GV089 [RCWV]
760108
760182
+
Thr
GGT
[ENA]
¡û
>W2011404567
RCWV01000002
Betaproteobacteria
Duganella sp. GV089 [RCWV]
461318
461244
-
Thr
GGT
[ENA]
¡û
>W2011497189
RXLQ01000004
Betaproteobacteria
Massilia sp. SOD [RXLQ]
113065
112991
-
Thr
GGT
[ENA]
¡û
>W2011497229
RXLQ01000022
Betaproteobacteria
Massilia sp. SOD [RXLQ]
295
221
-
Thr
GGT
[ENA]
¡û
>W2011578423
SGXH01000002
Betaproteobacteria
Duganella sp. BK701 [SGXH]
682570
682644
+
Thr
GGT
[ENA]
¡û
>W2011578430
SGXH01000002
Betaproteobacteria
Duganella sp. BK701 [SGXH]
427897
427823
-
Thr
GGT
[ENA]
¡û
>W2011647590
SNWF01000004
Betaproteobacteria
Herminiimonas fonticola DSM 18555 [SNWF]
421795
421869
+
Thr
GGT
[ENA]
¡û
>W2012082328
VLLB01000007
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
292574
292648
+
Thr
GGT
[ENA]
¡û
>W2012082329
VLLB01000007
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
59132
59058
-
Thr
GGT
[ENA]
¡û
>W2012089071
VMEK01000006
Betaproteobacteria
Zoogloea ramigera ATCC 19544 [VMEK]
107141
107215
+
Thr
GGT
[ENA]
¡û
>W2012089082
VMEK01000009
Betaproteobacteria
Zoogloea ramigera ATCC 19544 [VMEK]
165660
165734
+
Thr
GGT
[ENA]
¡û
>W2012157048
VUYU01000008
Betaproteobacteria
Massilia sp. CCM 8692 [VUYU]
27972
27898
-
Thr
GGT
[ENA]
¡û
>W2012157058
VUYU01000018
Betaproteobacteria
Massilia sp. CCM 8692 [VUYU]
592
666
+
Thr
GGT
[ENA]
¡û
>W2012157320
VVIW01000004
Betaproteobacteria
Massilia sp. CCM 8693 [VVIW]
391544
391470
-
Thr
GGT
[ENA]
¡û
>W2012157333
VVIW01000011
Betaproteobacteria
Massilia sp. CCM 8693 [VVIW]
93468
93542
+
Thr
GGT
[ENA]
¡û
>W2012325786
WHIV01000004
Betaproteobacteria
Duganella sp. FT27W [WHIV]
729358
729432
+
Thr
GGT
[ENA]
¡û
>W2012325793
WHIV01000004
Betaproteobacteria
Duganella sp. FT27W [WHIV]
459864
459790
-
Thr
GGT
[ENA]
¡û
>W2012326347
WHJF01000107
Betaproteobacteria
Massilia sp. CCM 8694 [WHJF]
22582
22656
+
Thr
GGT
[ENA]
¡û
>W2012326353
WHJF01000159
Betaproteobacteria
Massilia sp. CCM 8694 [WHJF]
6257
6183
-
Thr
GGT
[ENA]
¡û
>W2012326374
WHJG01000001
Betaproteobacteria
Massilia sp. CCM 8695 [WHJG]
154971
154897
-
Thr
GGT
[ENA]
¡û
>W2012326427
WHJG01000037
Betaproteobacteria
Massilia sp. CCM 8695 [WHJG]
69368
69294
-
Thr
GGT
[ENA]
¡û
>W2012326468
WHJH01000014
Betaproteobacteria
Massilia sp. CCM 8733 [WHJH]
41320
41246
-
Thr
GGT
[ENA]
¡û
>W2012326507
WHJH01000080
Betaproteobacteria
Massilia sp. CCM 8733 [WHJH]
453
379
-
Thr
GGT
[ENA]
¡û
>W2012326533
WHJI01000010
Betaproteobacteria
Massilia sp. CCM 8734 [WHJI]
17687
17761
+
Thr
GGT
[ENA]
¡û
>W2012326552
WHJI01000017
Betaproteobacteria
Massilia sp. CCM 8734 [WHJI]
402
328
-
Thr
GGT
[ENA]
¡û
>W2012330573
WHUF01000006
Betaproteobacteria
Rugamonas sp. FT103W [WHUF]
327714
327788
+
Thr
GGT
[ENA]
¡û
>W2012330576
WHUF01000006
Betaproteobacteria
Rugamonas sp. FT103W [WHUF]
14109
14035
-
Thr
GGT
[ENA]
¡û
>W2012330605
WHUG01000003
Betaproteobacteria
Rugamonas sp. FT29W [WHUG]
337277
337203
-
Thr
GGT
[ENA]
¡û
>W2012330641
WHUG01000017
Betaproteobacteria
Rugamonas sp. FT29W [WHUG]
149710
149636
-
Thr
GGT
[ENA]
¡û
>W2012357361
WKJK01000004
Betaproteobacteria
Duganella sp. FT80W [WKJK]
72131
72205
+
Thr
GGT
[ENA]
¡û
>W2012357449
WKJL01000008
Betaproteobacteria
Duganella rivus FT26W [WKJL]
95629
95555
-
Thr
GGT
[ENA]
¡û
>W2012357464
WKJL01000016
Betaproteobacteria
Duganella rivus FT26W [WKJL]
143276
143350
+
Thr
GGT
[ENA]
¡û
>W2012357491
WKJM01000002
Betaproteobacteria
Duganella aquatilis FT25W [WKJM]
326918
326992
+
Thr
GGT
[ENA]
¡û
>W2012357495
WKJM01000002
Betaproteobacteria
Duganella aquatilis FT25W [WKJM]
37077
37003
-
Thr
GGT
[ENA]
¡û
>W2012357573
WKJN01000006
Betaproteobacteria
Duganella albus FT9W [WKJN]
101924
101850
-
Thr
GGT
[ENA]
¡û
>W2012357622
WKJN01000041
Betaproteobacteria
Duganella albus FT9W [WKJN]
36995
36921
-
Thr
GGT
[ENA]
¡û
>W2012400466
WNWM01000002
Betaproteobacteria
Massilia dura DSM 17513 [WNWM]
2990733
2990807
+
Thr
GGT
[ENA]
¡û
>W2012400513
WNWM01000002
Betaproteobacteria
Massilia dura DSM 17513 [WNWM]
2739618
2739544
-
Thr
GGT
[ENA]
¡û
>W2012469565
WWCN01000001
Betaproteobacteria
Duganella sp. FT135W [WWCN]
439202
439128
-
Thr
GGT
[ENA]
¡û
>W2012469576
WWCN01000005
Betaproteobacteria
Duganella sp. FT135W [WWCN]
219812
219738
-
Thr
GGT
[ENA]
¡û
>W2012469642
WWCO01000001
Betaproteobacteria
Duganella sp. FT94W [WWCO]
345699
345625
-
Thr
GGT
[ENA]
¡û
>W2012469646
WWCO01000001
Betaproteobacteria
Duganella sp. FT94W [WWCO]
917
843
-
Thr
GGT
[ENA]
¡û
>W2012469711
WWCP01000001
Betaproteobacteria
Duganella sp. FT50W [WWCP]
133343
133417
+
Thr
GGT
[ENA]
¡û
>W2012469779
WWCP01000061
Betaproteobacteria
Duganella sp. FT50W [WWCP]
17425
17499
+
Thr
GGT
[ENA]
¡û
>W2012469815
WWCQ01000002
Betaproteobacteria
Duganella sp. CY15W [WWCQ]
750631
750705
+
Thr
GGT
[ENA]
¡û
>W2012469822
WWCQ01000002
Betaproteobacteria
Duganella sp. CY15W [WWCQ]
445797
445723
-
Thr
GGT
[ENA]
¡û
>W2012469886
WWCR01000014
Betaproteobacteria
Duganella sp. FT134W [WWCR]
55912
55986
+
Thr
GGT
[ENA]
¡û
>W2012469913
WWCR01000026
Betaproteobacteria
Duganella sp. FT134W [WWCR]
75150
75076
-
Thr
GGT
[ENA]
¡û
>W2012469937
WWCS01000001
Betaproteobacteria
Duganella pernnla FT109W [WWCS]
330448
330374
-
Thr
GGT
[ENA]
¡û
>W2012469956
WWCS01000008
Betaproteobacteria
Duganella pernnla FT109W [WWCS]
7853
7927
+
Thr
GGT
[ENA]
¡û
>W2012470038
WWCT01000010
Betaproteobacteria
Duganella levis CY42W [WWCT]
132743
132669
-
Thr
GGT
[ENA]
¡û
>W2012470040
WWCT01000011
Betaproteobacteria
Duganella levis CY42W [WWCT]
36817
36891
+
Thr
GGT
[ENA]
¡û
>W2012470097
WWCU01000005
Betaproteobacteria
Massilia aquatica FT127W [WWCU]
220728
220654
-
Thr
GGT
[ENA]
¡û
>W2110025617
BMHS01000016
Betaproteobacteria
Massilia psychrophila CGMCC 1.15196 [BMHS]
64893
64967
+
Thr
GGT
[ENA]
¡û
>W2110025628
BMHS01000023
Betaproteobacteria
Massilia psychrophila CGMCC 1.15196 [BMHS]
646
572
-
Thr
GGT
[ENA]
¡û
>W2110046810
BMWU01000006
Betaproteobacteria
Massilia dura KCTC 12342 [BMWU]
119647
119573
-
Thr
GGT
[ENA]
¡û
>W2110046818
BMWU01000011
Betaproteobacteria
Massilia dura KCTC 12342 [BMWU]
179331
179405
+
Thr
GGT
[ENA]
¡û
>W2110046864
BMWV01000001
Betaproteobacteria
Massilia albidiflava KCTC 12343 [BMWV]
616673
616747
+
Thr
GGT
[ENA]
¡û
>W2110046873
BMWV01000001
Betaproteobacteria
Massilia albidiflava KCTC 12343 [BMWV]
319599
319525
-
Thr
GGT
[ENA]
¡û
>W2110046966
BMWW01000004
Betaproteobacteria
Massilia plicata KCTC 12344 [BMWW]
17921
17995
+
Thr
GGT
[ENA]
¡û
>W2110046971
BMWW01000004
Betaproteobacteria
Massilia plicata KCTC 12344 [BMWW]
577437
577511
+
Thr
GGT
[ENA]
¡û
>W2110097052
CAJEVT010000001
Betaproteobacteria
Herminiimonas sp. Marseille-P9896 [CAJEVT]
513547
513621
+
Thr
GGT
[ENA]
¡û
>ENV09004070
ADIG01003442
Groundwater metagenome 4000601.lucy.pga.C1
472
546
+
Thr
GGT
[ENA]
¡û
>W2110289258
JACYOX010000038
Betaproteobacteria
Noviherbaspirillum soli SUEMI10 [JACYOX]
50066
50140
+
Thr
GGT
[ENA]
¡û
>W2110290336
JACYUA010000017
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
125405
125479
+
Thr
GGT
[ENA]
¡û
>W2110290358
JACYUA010000027
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
91413
91487
+
Thr
GGT
[ENA]
¡û
>W2110290467
JACYUC010000004
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8763 CFBP8763 [JACYUC]
258249
258175
-
Thr
GGT
[ENA]
¡û
>W2110290580
JACYUE010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8761 CFBP8761 [JACYUE]
262556
262630
+
Thr
GGT
[ENA]
¡û
>W2110290792
JACYUN010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8755 CFBP8755 [JACYUN]
296230
296156
-
Thr
GGT
[ENA]
¡û
>W2110290947
JACYUQ010000004
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13730 CFBP13730 [JACYUQ]
335527
335453
-
Thr
GGT
[ENA]
¡û
>W2110291265
JACYUX010000002
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8753 CFBP8753 [JACYUX]
245223
245297
+
Thr
GGT
[ENA]
¡û
>W2110291309
JACYUY010000012
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
7448
7374
-
Thr
GGT
[ENA]
¡û
>W2110291329
JACYUY010000025
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
384
310
-
Thr
GGT
[ENA]
¡û
>W2110291723
JACYVK010000004
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13708 CFBP13708 [JACYVK]
298590
298664
+
Thr
GGT
[ENA]
¡û
>W2110360986
JADOEL010000008
Betaproteobacteria
Herminiimonas contaminans Marseille-Q4544 [JADOEL]
43211
43285
+
Thr
GGT
[ENA]
¡û
>W2110428658
JAEMNU010000022
Betaproteobacteria
Rugamonas sp. CCM 8940 [JAEMNU]
96150
96076
-
Thr
GGT
[ENA]
¡û
>W2110428669
JAEMNU010000037
Betaproteobacteria
Rugamonas sp. CCM 8940 [JAEMNU]
90973
91047
+
Thr
GGT
[ENA]
¡û
>W2110463019
JAFBIL020000001
Betaproteobacteria
Massilia sp. R798 [JAFBIL]
621428
621502
+
Thr
GGT
[ENA]
¡û
>W2110463027
JAFBIL020000001
Betaproteobacteria
Massilia sp. R798 [JAFBIL]
383848
383774
-
Thr
GGT
[ENA]
¡û
>W2110500201
JAFICD010000003
Betaproteobacteria
Duganella sp. 1411 [JAFICD]
393148
393222
+
Thr
GGT
[ENA]
¡û
>W2110500208
JAFICD010000003
Betaproteobacteria
Duganella sp. 1411 [JAFICD]
70949
70875
-
Thr
GGT
[ENA]
¡û
>W2110638105
JAHQRJ010000001
Betaproteobacteria
Noviherbaspirillum sp. L7-7A [JAHQRJ]
3683780
3683854
+
Thr
GGT
[ENA]
¡û
>W2110645218
JAHTGR010000003
Betaproteobacteria
Duganella sp. HSC-15S17 [JAHTGR]
239481
239555
+
Thr
GGT
[ENA]
¡û
>W2110645237
JAHTGR010000009
Betaproteobacteria
Duganella sp. HSC-15S17 [JAHTGR]
106351
106425
+
Thr
GGT
[ENA]
¡û
>W2110649319
JAHUWK010000011
Betaproteobacteria
Duganella sp. sic0402 [JAHUWK]
232233
232307
+
Thr
GGT
[ENA]
¡û
>W2110649327
JAHUWK010000016
Betaproteobacteria
Duganella sp. sic0402 [JAHUWK]
36149
36075
-
Thr
GGT
[ENA]
¡û
>C211168310
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
1645385
1645459
+
Thr
GGT
-
¡û
>C211168361
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
1384472
1384398
-
Thr
GGT
-
¡û
>C211199746
CP065053
Betaproteobacteria
Massilia sp. CCM 8941 [CP065053]
2155435
2155509
+
Thr
GGT
-
¡û
>C211199809
CP065053
Betaproteobacteria
Massilia sp. CCM 8941 [CP065053]
1834158
1834084
-
Thr
GGT
-
¡û
>C211377043
CP080378
Betaproteobacteria
Massilia sp. PAMC28688 [CP080378]
1862282
1862356
+
Thr
GGT
-
¡û
>C211377088
CP080378
Betaproteobacteria
Massilia sp. PAMC28688 [CP080378]
1591701
1591627
-
Thr
GGT
-
¡û
>C231096016
CP063361
Betaproteobacteria
Massilia violaceinigra sipir [CP063361]
2874316
2874390
+
Thr
GGT
-
¡û
>C231096069
CP063361
Betaproteobacteria
Massilia violaceinigra sipir [CP063361]
2546094
2546020
-
Thr
GGT
-
¡û
>C231227177
CP086370
Betaproteobacteria
Massilia sp. HC52 [CP086370]
820634
820708
+
Thr
GGT
-
¡û
>C231247535
CP087969
Betaproteobacteria
Massilia sp. H-1 [CP087969]
2717751
2717825
+
Thr
GGT
-
¡û
>C231247568
CP087969
Betaproteobacteria
Massilia sp. H-1 [CP087969]
2446024
2445950
-
Thr
GGT
-
¡û
>C231247590
CP087970
Betaproteobacteria
Massilia sp. B-10 [CP087970]
2716321
2716395
+
Thr
GGT
-
¡û
>C231247620
CP087970
Betaproteobacteria
Massilia sp. B-10 [CP087970]
2444748
2444674
-
Thr
GGT
-
¡û
>C231416614
CP099650
Betaproteobacteria
Oxalobacteraceae bacterium OTU3CAMAD1 [CP099650]
788278
788352
+
Thr
GGT
-
¡û
>C231416686
CP099650
Betaproteobacteria
Oxalobacteraceae bacterium OTU3CAMAD1 [CP099650]
485229
485155
-
Thr
GGT
-
¡û
>C231416693
CP099651
Betaproteobacteria
Oxalobacteraceae bacterium OTU3REALA1 [CP099651]
830012
830086
+
Thr
GGT
-
¡û
>C231416765
CP099651
Betaproteobacteria
Oxalobacteraceae bacterium OTU3REALA1 [CP099651]
547567
547493
-
Thr
GGT
-
¡û
>C231416772
CP099652
Betaproteobacteria
Oxalobacteraceae bacterium OTU3CINTB1 [CP099652]
785941
786015
+
Thr
GGT
-
¡û
>C231416844
CP099652
Betaproteobacteria
Oxalobacteraceae bacterium OTU3CINTB1 [CP099652]
460932
460858
-
Thr
GGT
-
¡û
>C231468922
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
527887
527961
+
Thr
GGT
-
¡û
>C231468990
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
302552
302478
-
Thr
GGT
-
¡û
>C231648726
CP122407
Betaproteobacteria
Rugamonas sp. DEMB1 [CP122407]
6284245
6284319
+
Thr
GGT
-
¡û
>C231648738
CP122407
Betaproteobacteria
Rugamonas sp. DEMB1 [CP122407]
6025603
6025529
-
Thr
GGT
-
¡û
>C241151526
CP051684
Betaproteobacteria
Duganella dendranthematis AF9R3 [CP051684]
2781569
2781643
+
Thr
GGT
-
¡û
>C241151564
CP051684
Betaproteobacteria
Duganella dendranthematis AF9R3 [CP051684]
2494281
2494207
-
Thr
GGT
-
¡û
>C241312837
CP133777
Betaproteobacteria
Actimicrobium sp. CCC2.4 [CP133777]
153503
153429
-
Thr
GGT
-
¡û
>C241354689
CP140152
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [CP140152]
5918306
5918380
+
Thr
GGT
-
¡û
>C241354698
CP140152
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [CP140152]
5627849
5627775
-
Thr
GGT
-
¡û
>W11143226
AEPR01000961
Betaproteobacteria
Oxalobacteraceae bacterium IMCC9480 [AEPR]
186
112
-
Thr
GGT
[ENA]
¡û
>WENV057473
AACY023295671
Marine microbial communities from Global Ocean Sampling (GOS)
1258
1332
+
Thr
GGT
[ENA]
>W1610093114
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
1183124
1183198
+
Thr
GGT
[ENA]
¡û
>W1610093159
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
874542
874468
-
Thr
GGT
[ENA]
¡û
>W1610163408
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
1183124
1183198
+
Thr
GGT
[ENA]
¡û
>W1610163453
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
874542
874468
-
Thr
GGT
[ENA]
¡û
>W1610640158
LIZH01001789
Betaproteobacteria
Duganella sp. Ant L27C-9 [LIZH]
420
494
+
Thr
GGT
[ENA]
¡û
>W1610734131
LMLM01000023
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
165350
165424
+
Thr
GGT
[ENA]
¡û
>W1610734167
LMLM01000031
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
89782
89856
+
Thr
GGT
[ENA]
¡û
>W1610737125
LMNW01000033
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
221047
221121
+
Thr
GGT
[ENA]
¡û
>W1610737129
LMNW01000033
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
440
366
-
Thr
GGT
[ENA]
¡û
>W1610737782
LMOJ01000023
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
66085
66159
+
Thr
GGT
[ENA]
¡û
>W1610753758
LNEU01000033
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
330
256
-
Thr
GGT
[ENA]
¡û
>W1710096322
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
1183124
1183198
+
Thr
GGT
[ENA]
¡û
>W1710096367
CYSS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [CYSS]
874542
874468
-
Thr
GGT
[ENA]
¡û
>W1710165075
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
1183124
1183198
+
Thr
GGT
[ENA]
¡û
>W1710165120
FAOS01000003
Betaproteobacteria
Janthinobacterium sp. CG23_2 [FAOS]
874542
874468
-
Thr
GGT
[ENA]
¡û
>W1710515872
FNCD01000008
Betaproteobacteria
Duganella sp. OV458 [FNCD]
329648
329722
+
Thr
GGT
[ENA]
¡û
>W1710515874
FNCD01000008
Betaproteobacteria
Duganella sp. OV458 [FNCD]
71715
71641
-
Thr
GGT
[ENA]
¡û
>W1710519292
FNEQ01000004
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
422546
422620
+
Thr
GGT
[ENA]
¡û
>W1710519296
FNEQ01000004
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
164357
164283
-
Thr
GGT
[ENA]
¡û
>W1710545169
FOBG01000003
Betaproteobacteria
Duganella sp. CF402 [FOBG]
414395
414321
-
Thr
GGT
[ENA]
¡û
>W1710545172
FOBG01000004
Betaproteobacteria
Duganella sp. CF402 [FOBG]
172228
172302
+
Thr
GGT
[ENA]
¡û
>W1710547603
FODC01000006
Betaproteobacteria
Duganella sp. CF517 [FODC]
94318
94392
+
Thr
GGT
[ENA]
¡û
>W1710547611
FODC01000008
Betaproteobacteria
Duganella sp. CF517 [FODC]
118465
118539
+
Thr
GGT
[ENA]
¡û
>W1710557560
FOLD01000001
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
422602
422676
+
Thr
GGT
[ENA]
¡û
>W1710568783
FOTW01000007
Betaproteobacteria
Rugamonas rubra [FOTW]
240810
240884
+
Thr
GGT
[ENA]
¡û
>W1710568787
FOTW01000007
Betaproteobacteria
Rugamonas rubra [FOTW]
628
554
-
Thr
GGT
[ENA]
¡û
>W1710578380
FPBO01000003
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
190185
190111
-
Thr
GGT
[ENA]
¡û
>W1710578430
FPBO01000031
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
1090
1016
-
Thr
GGT
[ENA]
¡û
>W1710586012
FQWU01000003
Betaproteobacteria
Massilia sp. CF038 [FQWU]
272801
272875
+
Thr
GGT
[ENA]
¡û
>W1710586017
FQWU01000003
Betaproteobacteria
Massilia sp. CF038 [FQWU]
353
279
-
Thr
GGT
[ENA]
¡û
>W1710593000
FRCX01000003
Betaproteobacteria
Duganella sacchari [FRCX]
125661
125735
+
Thr
GGT
[ENA]
¡û
>W1710593040
FRCX01000012
Betaproteobacteria
Duganella sacchari [FRCX]
182645
182719
+
Thr
GGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK