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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.740574 (69 seq.)
>W1710811779
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
207795
207867
+
Gln
TTG
[ENA]
¡û
>W1710875517
LMOL01000007
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
147400
147472
+
Gln
TTG
[ENA]
¡û
>W1710876310
LMPC01000026
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
96124
96052
-
Gln
TTG
[ENA]
¡û
>W1710880035
LMSB01000023
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
114071
114143
+
Gln
TTG
[ENA]
¡û
>W1710880328
LMSG01000021
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
46503
46575
+
Gln
TTG
[ENA]
¡û
>W1711768849
MVDG01000089
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
113560
113488
-
Gln
TTG
[ENA]
¡û
>WENV180040291
LLBY010636768
[LLBY] soil metagenome; soil from tomato rhizosphere
641
713
+
Gln
TTG
[ENA]
¡û
>C181000303
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
1088123
1088195
+
Gln
TTG
-
¡û
>C191174045
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
1511578
1511650
+
Gln
TTG
-
¡û
>C191188271
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
1854157
1854229
+
Gln
TTG
-
¡û
>W141702009
JMLE01000007
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
21321
21249
-
Gln
TTG
[ENA]
¡û
>W1911532744
OIVI01000308
Actinomycetota
Arthrobacter alpinus [OIVI]
85305
85233
-
Gln
TTG
[ENA]
¡û
>W1810167237
PJII01000002
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
278236
278164
-
Gln
TTG
[ENA]
¡û
>W1810167311
PJIJ01000003
Actinomycetota
Arthrobacter sp. ZGTC212 [PJIJ]
408418
408490
+
Gln
TTG
[ENA]
¡û
>W1810167335
PJIK01000002
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
153645
153717
+
Gln
TTG
[ENA]
¡û
>W1810167381
PJIL01000002
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
365204
365132
-
Gln
TTG
[ENA]
¡û
>W1810167744
PJIS01000003
Actinomycetota
Arthrobacter sp. 9E06 [PJIS]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167795
PJIT01000003
Actinomycetota
Arthrobacter sp. 9E18 [PJIT]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167846
PJIU01000003
Actinomycetota
Arthrobacter sp. 9E16 [PJIU]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167919
PJIW01000004
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
184985
185057
+
Gln
TTG
[ENA]
¡û
>W1810167993
PJIX01000003
Actinomycetota
Arthrobacter sp. 08Y14 [PJIX]
428852
428924
+
Gln
TTG
[ENA]
¡û
>W1810474953
QAIQ01000099
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
4067
3995
-
Gln
TTG
[ENA]
¡û
>W1810707025
QMKP01000001
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
119487
119559
+
Gln
TTG
[ENA]
¡û
>W2010440025
JAAAXP010000001
Actinomycetota
[Micrococcus luteus] ATCC 49442 [JAAAXP]
1879304
1879232
-
Gln
TTG
[ENA]
¡û
>W2011165431
OIVI01000308
Actinomycetota
Arthrobacter alpinus [OIVI]
85305
85233
-
Gln
TTG
[ENA]
¡û
>W2011589015
SIHX01000003
Actinomycetota
Arthrobacter sp. S39 [SIHX]
309496
309424
-
Gln
TTG
[ENA]
¡û
>W2012099221
VOAL01000006
Actinomycetota
Arthrobacter sp. 208 [VOAL]
282914
282842
-
Gln
TTG
[ENA]
¡û
>W2012139493
VTFU01000004
Actinomycetota
Arthrobacter gandavensis JCM 13316 [VTFU]
349206
349134
-
Gln
TTG
[ENA]
¡û
>W2012139593
VTFX01000005
Actinomycetota
Arthrobacter sp. 785 [VTFX]
491359
491431
+
Gln
TTG
[ENA]
¡û
>W2012153547
VULS01000004
Actinomycetota
BL-252-APC-1A (aerob) [VULS]
6626
6698
+
Gln
TTG
[ENA]
¡û
>W2012228262
WBJQ01000004
Actinomycetota
Arthrobacter luteolus DSM 13067 [WBJQ]
242754
242826
+
Gln
TTG
[ENA]
¡û
>W2110260085
JACSQC010000002
Actinomycetota
Arthrobacter sp. Sa2BUA2 [JACSQC]
297440
297368
-
Gln
TTG
[ENA]
¡û
>W2110283799
JACXBW010000004
Actinomycetota
Pseudarthrobacter sulfonivorans ALL [JACXBW]
38570
38642
+
Gln
TTG
[ENA]
¡û
>W2110515712
JAFMSO010000004
Actinomycetota
Arthrobacter sp. zg-ZUI10 [JAFMSO]
366253
366325
+
Gln
TTG
[ENA]
¡û
>W2110515762
JAFMSP010000004
Actinomycetota
Arthrobacter sp. zg-ZUI122 [JAFMSP]
425082
425154
+
Gln
TTG
[ENA]
¡û
>W2110543366
JAGGPM010000035
Actinomycetota
Arthrobacter sp. ISL-5 [JAGGPM]
164182
164254
+
Gln
TTG
[ENA]
¡û
>W2110543404
JAGGPN010000020
Actinomycetota
Arthrobacter sp. ISL-65 [JAGGPN]
157607
157679
+
Gln
TTG
[ENA]
¡û
>W2110543433
JAGGPO010000013
Actinomycetota
Arthrobacter sp. ISL-69 [JAGGPO]
22575
22647
+
Gln
TTG
[ENA]
¡û
>W2110559405
JAGKQF010000003
Actinomycetota
Arthrobacter sp. zg-ZUI100 [JAGKQF]
316269
316197
-
Gln
TTG
[ENA]
¡û
>W2110559442
JAGKQG010000003
Actinomycetota
Arthrobacter sp. zg-ZUI227 [JAGKQG]
355006
355078
+
Gln
TTG
[ENA]
¡û
>C211058767
CP043178
Actinomycetota
Pseudarthrobacter sp. NBSH8 [CP043178]
1223010
1223082
+
Gln
TTG
-
¡û
>C211152234
CP061721
Actinomycetota
Pseudarthrobacter sp. BIM B-2242 [CP061721]
1241914
1241986
+
Gln
TTG
-
¡û
>C211341281
CP076022
Actinomycetota
Arthrobacter sp. zg-ZUI227 [CP076022]
1028291
1028363
+
Gln
TTG
-
¡û
>C211345603
CP076456
Actinomycetota
Arthrobacter sp. zg-ZUI122 [CP076456]
1137226
1137298
+
Gln
TTG
-
¡û
>C231051355
CP044532
Actinomycetota
Arthrobacter sp. CDRTa11 [CP044532]
1533362
1533434
+
Gln
TTG
-
¡û
>C231354823
CP094984
Actinomycetota
Arthrobacter sp. zg-Y462 [CP094984]
1076519
1076591
+
Gln
TTG
-
¡û
>C231360049
CP095402
Actinomycetota
Arthrobacter sp. Helios [CP095402]
572798
572870
+
Gln
TTG
-
¡û
>C231361236
CP095461
Actinomycetota
Arthrobacter sp. zg-Y809 [CP095461]
1054799
1054871
+
Gln
TTG
-
¡û
>C231374512
CP096882
Actinomycetota
Pseudarthrobacter sp. SSS035 [CP096882]
530533
530461
-
Gln
TTG
-
¡û
>W2110757852
PZKO01000008
Actinomycetota
Pseudarthrobacter sp. AB1 [PZKO]
129277
129205
-
Gln
TTG
[ENA]
¡û
>C231486985
CP104263
Actinomycetota
Arthrobacter sp. zg-Y859 [CP104263]
1012393
1012465
+
Gln
TTG
-
¡û
>C231487036
CP104264
Actinomycetota
Arthrobacter sp. zg-Y1171 [CP104264]
940769
940841
+
Gln
TTG
-
¡û
>C231487087
CP104272
Actinomycetota
Arthrobacter sp. zg-Y1110 [CP104272]
996140
996212
+
Gln
TTG
-
¡û
>C231487226
CP104275
Actinomycetota
Arthrobacter sp. zg-Y815 [CP104275]
979267
979339
+
Gln
TTG
-
¡û
>C231548446
CP113343
Actinomycetota
Arthrobacter sp. MMS18-M83 [CP113343]
1228600
1228528
-
Gln
TTG
-
¡û
>C231554948
CP114015
Actinomycetota
Arthrobacter sp. ATA002 [CP114015]
3062061
3061989
-
Gln
TTG
-
¡û
>C231664837
OX352321
Actinomycetota
Arthrobacter sp. MM222 [OX352321]
1283885
1283957
+
Gln
TTG
-
¡û
>C241126533
CP047898
Actinomycetota
Pseudarthrobacter psychrotolerans YJ56 [CP047898]
4826012
4826084
+
Gln
TTG
-
¡û
>W2130016618
JACSQD010000005
Actinomycetota
Arthrobacter sp. Sa2CUA1 [JACSQD]
291432
291360
-
Gln
TTG
[ENA]
¡û
>W2130044334
UZAA01000308
Actinomycetota
Arthrobacter alpinus [UZAA]
85305
85233
-
Gln
TTG
[ENA]
¡û
>W1511685696
LFQH01000052
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
27282
27354
+
Gln
TTG
[ENA]
¡û
>C161060753
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
920867
920795
-
Gln
TTG
[Ensembl]
¡û
>W1610067303
BCQM01000003
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
287846
287918
+
Gln
TTG
[ENA]
¡û
>W1610675876
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
207795
207867
+
Gln
TTG
[ENA]
¡û
>W1610737863
LMOL01000007
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
147400
147472
+
Gln
TTG
[ENA]
¡û
>W1610738656
LMPC01000026
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
96124
96052
-
Gln
TTG
[ENA]
¡û
>W1610742381
LMSB01000023
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
114071
114143
+
Gln
TTG
[ENA]
¡û
>W1610742674
LMSG01000021
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
46503
46575
+
Gln
TTG
[ENA]
¡û
>W1710064676
BCQM01000003
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
287846
287918
+
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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