This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.81880 (5 seq.)
>WENV180376564
OBOM01028418
[OBOM] marine metagenome; Seawater
294
208
-
Leu
CAG
[ENA]
¡û
>WENV180395593
OBPT01050396
[OBPT] marine metagenome; ENVO:00002010 seawater
88
2
-
Leu
CAG
[ENA]
¡û
>W1910442953
FWFQ01000030
Alphaproteobacteria
Pseudoruegeria aquimaris CECT 7680 [FWFQ]
16333
16247
-
Leu
CAG
[ENA]
¡û
>W2010313619
CABZHA010000052
Alphaproteobacteria
Rhodobacteraceae bacterium [CABZHA]
1397
1311
-
Leu
CAG
[ENA]
¡û
>W2010406317
FWFQ01000030
Alphaproteobacteria
Pseudoruegeria aquimaris CECT 7680 [FWFQ]
16333
16247
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK