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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.83680 (242 seq.)
>W1710860845
LMDE01000016
Actinomycetota
Nocardioides sp. Root122 [LMDE]
114206
114120
-
Leu
GAG
[ENA]
¡û
>W1710861698
LMDV01000001
Actinomycetota
Nocardioides sp. Root1257 [LMDV]
179800
179714
-
Leu
GAG
[ENA]
¡û
>W1710863681
LMFI01000001
Actinomycetota
Nocardioides sp. Root140 [LMFI]
1203494
1203408
-
Leu
GAG
[ENA]
¡û
>W1710864913
LMGG01000004
Actinomycetota
Nocardioides sp. Root151 [LMGG]
852404
852318
-
Leu
GAG
[ENA]
¡û
>W1710865657
LMGV01000010
Actinomycetota
Nocardioides sp. Root614 [LMGV]
261101
261013
-
Leu
GAG
[ENA]
¡û
>W1710866350
LMHJ01000005
Actinomycetota
Nocardioides sp. Root682 [LMHJ]
262969
262881
-
Leu
GAG
[ENA]
¡û
>W1710867154
LMIA01000012
Actinomycetota
Nocardioides sp. Root190 [LMIA]
149581
149493
-
Leu
GAG
[ENA]
¡û
>W1710867718
LMIN01000001
Actinomycetota
Nocardioides sp. Root224 [LMIN]
179780
179694
-
Leu
GAG
[ENA]
¡û
>W1710867837
LMIP01000013
Actinomycetota
Nocardioides sp. Root79 [LMIP]
269609
269521
-
Leu
GAG
[ENA]
¡û
>W1710868004
LMIT01000002
Actinomycetota
Nocardioides sp. Root240 [LMIT]
763640
763552
-
Leu
GAG
[ENA]
¡û
>W1710874069
LMNH01000003
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
1076934
1076848
-
Leu
GAG
[ENA]
¡û
>W1710874858
LMNY01000001
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
1830697
1830611
-
Leu
GAG
[ENA]
¡û
>W1710880678
LMSM01000011
Actinomycetota
Nocardioides sp. Soil774 [LMSM]
130943
130857
-
Leu
GAG
[ENA]
¡û
>W1710880693
LMSN01000008
Actinomycetota
Nocardioides sp. Soil777 [LMSN]
34794
34708
-
Leu
GAG
[ENA]
¡û
>W1710880876
LMSQ01000012
Actinomycetota
Nocardioides sp. Soil796 [LMSQ]
152590
152504
-
Leu
GAG
[ENA]
¡û
>W1710880929
LMSR01000015
Actinomycetota
Nocardioides sp. Soil797 [LMSR]
188551
188465
-
Leu
GAG
[ENA]
¡û
>W1710881082
LMSU01000003
Actinomycetota
Nocardioides sp. Soil805 [LMSU]
461086
461000
-
Leu
GAG
[ENA]
¡û
>W1711126684
LUPF01000001
Actinomycetota
Nocardioides sp. REDSEA-S22_B2 [LUPF]
30811
30723
-
Leu
GAG
[ENA]
¡û
>W1711126781
LUPH01000148
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
8658
8746
+
Leu
GAG
[ENA]
¡û
>W1711126784
LUPH01000234
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
2805
2717
-
Leu
GAG
[ENA]
¡û
>W1711126796
LUPI01000008
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
184306
184394
+
Leu
GAG
[ENA]
¡û
>W1711126861
LUPJ01000150
Actinomycetota
Nocardioides sp. REDSEA-S31_B4 [LUPJ]
11939
12027
+
Leu
GAG
[ENA]
¡û
>W1711126916
LUPK01000059
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
103763
103675
-
Leu
GAG
[ENA]
¡û
>W1711126940
LUPL01000071
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
47529
47617
+
Leu
GAG
[ENA]
¡û
>W1711126980
LUPM01000230
Actinomycetota
Nocardioides sp. REDSEA-S36_B10 [LUPM]
1967
2055
+
Leu
GAG
[ENA]
¡û
>W1711127018
LUPN01000221
Actinomycetota
Nocardioides sp. REDSEA-S37_B12 [LUPN]
2793
2705
-
Leu
GAG
[ENA]
¡û
>W1711127039
LUPO01000006
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
178047
178135
+
Leu
GAG
[ENA]
¡û
>W1711127074
LUPP01000010
Actinomycetota
Nocardioides sp. REDSEA-S40_B4 [LUPP]
141959
142047
+
Leu
GAG
[ENA]
¡û
>W1711127144
LUPQ01000120
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
87670
87758
+
Leu
GAG
[ENA]
¡û
>WENV010984
AACY020298660
Marine microbial communities from Global Ocean Sampling (GOS)
1150
1060
-
Leu
GAG
[ENA]
>W1712084126
NHQT01000004
Actinomycetota
Nocardioides sp. XL1 [NHQT]
136295
136383
+
Leu
GAG
[ENA]
¡û
>W131227902
AUFN01000012
Actinomycetota
Nocardioides alkalitolerans DSM 16699 [AUFN]
314396
314310
-
Leu
GAG
[ENA]
¡û
>C015210
CP000509
Actinomycetota
Nocardioides sp. JS614 [CP000509]
2788153
2788065
-
Leu
GAG
[Ensembl]
¡û
>WENV180000087
CZKB01000025
[CZKB] metagenome; liquid mineral medium
320396
320310
-
Leu
GAG
[ENA]
¡û
>WENV180039878
LLBY010200310
[LLBY] soil metagenome; soil from tomato rhizosphere
7
95
+
Leu
GAG
[ENA]
¡û
>WENV180291991
OBIV01257401
[OBIV] soil metagenome; Clay
96
183
+
Leu
GAG
[ENA]
¡û
>WENV180690536
OCZS010009898
[OCZS] soil metagenome; soil
1907
1993
+
Leu
GAG
[ENA]
¡û
>WENV181164944
OEIR01470947
[OEIR] soil metagenome; soil
148
62
-
Leu
GAG
[ENA]
¡û
>WENV181223015
OFDC01001181
[OFDC] hot springs metagenome; Water
13800
13713
-
Leu
GAG
[ENA]
¡û
>W141277524
JAER01000002
Actinomycetota
Nocardioides sp. J54 [JAER]
1440
1354
-
Leu
GAG
[ENA]
¡û
>WENV183511898
OMJG01010691
[OMJG] food metagenome; Cotija cheese
1299
1385
+
Leu
GAG
[ENA]
¡û
>WENV170229456
CEQG01121839
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
635
547
-
Leu
GAG
[ENA]
¡û
>W141406655
JDYK01000002
Actinomycetota
Brachybacterium phenoliresistens [JDYK]
233368
233456
+
Leu
GAG
[ENA]
¡û
>WENV170552342
CXWJ01057058
[CXWJ] wastewater metagenome; activated sludge
1559
1473
-
Leu
GAG
[ENA]
¡û
>WENV170727492
LULE01000200
[LULE] marine metagenome; Red Sea water column Station 192 - depth 10m
8531
8443
-
Leu
GAG
[ENA]
¡û
>WENV170728617
LULF01000001
[LULF] marine metagenome; Red Sea water column Station 169 - depth 500m
178047
178135
+
Leu
GAG
[ENA]
¡û
>WENV170730723
LULH01002360
[LULH] marine metagenome; Red Sea water column Station 169 - depth 100m
2793
2705
-
Leu
GAG
[ENA]
¡û
>WENV170731747
LULI01002734
[LULI] marine metagenome; Red Sea water column Station 169 - depth 50m
1967
2055
+
Leu
GAG
[ENA]
¡û
>WENV170733592
LULJ01032636
[LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m
548
460
-
Leu
GAG
[ENA]
¡û
>WENV170733774
LULK01000071
[LULK] marine metagenome; Red Sea water column Station 169 - depth 10m
47529
47617
+
Leu
GAG
[ENA]
¡û
>WENV170735094
LULL01000006
[LULL] marine metagenome; Red Sea water column Station 149 - depth 500m
103763
103675
-
Leu
GAG
[ENA]
¡û
>WENV170736628
LULM01012748
[LULM] marine metagenome; Red Sea water column Station 149 - depth 200m
597
685
+
Leu
GAG
[ENA]
¡û
>WENV170736988
LULN01000558
[LULN] marine metagenome; Red Sea water column Station 149 - depth 100m
11939
12027
+
Leu
GAG
[ENA]
¡û
>WENV170737388
LULO01000015
[LULO] marine metagenome; Red Sea water column Station 149 - depth 50m
184306
184394
+
Leu
GAG
[ENA]
¡û
>WENV170739364
LULQ01000443
[LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m
8658
8746
+
Leu
GAG
[ENA]
¡û
>WENV170739631
LULQ01005750
[LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m
2805
2717
-
Leu
GAG
[ENA]
¡û
>WENV170742259
LULU01007247
[LULU] marine metagenome; Red Sea water column Station 108 - depth 50m
1410
1498
+
Leu
GAG
[ENA]
¡û
>WENV170743486
LULW01000204
[LULW] marine metagenome; Red Sea water column Station 108 - depth 10m
8566
8478
-
Leu
GAG
[ENA]
¡û
>WENV170746192
LULZ01013109
[LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m
554
642
+
Leu
GAG
[ENA]
¡û
>WENV170758882
LUMS01000164
[LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m
3305
3393
+
Leu
GAG
[ENA]
¡û
>WENV170760741
LUMU01000025
[LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m
87670
87758
+
Leu
GAG
[ENA]
¡û
>WENV170761867
LUMW01000025
[LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m
59292
59380
+
Leu
GAG
[ENA]
¡û
>C181119561
CP025581
Actinomycetota
Nocardioides houyundeii 78 [CP025581]
1979007
1979093
+
Leu
GAG
-
¡û
>C191104191
CP033324
Actinomycetota
Nocardioides pantholopis 603 [CP033324]
2093213
2093299
+
Leu
GAG
-
¡û
>C191158878
CP038267
Actinomycetota
Nocardioides euryhalodurans MMS17-SY117 [CP038267]
372282
372194
-
Leu
GAG
-
¡û
>C191159464
CP038436
Actinomycetota
Nocardioides seonyuensis MMS17-SY207-3 [CP038436]
3675809
3675897
+
Leu
GAG
-
¡û
>C191181610
CP040695
Actinomycetota
Nocardioides sp. S-1144 [CP040695]
2127919
2127833
-
Leu
GAG
-
¡û
>C191186678
CP041091
Actinomycetota
Nocardioides sambongensis KUDC 5002 [CP041091]
1105755
1105841
+
Leu
GAG
-
¡û
>C191187007
CP041146
Actinomycetota
Nocardioides humi DCY24 [CP041146]
6060236
6060148
-
Leu
GAG
-
¡û
>W141564498
JIAV01000010
Actinomycetota
Nocardioides sp. URHA0032 [JIAV]
303382
303470
+
Leu
GAG
[ENA]
¡û
>W09103275
AAJB01000051
Actinomycetota
Nocardioides sp. JS614 [AAJB]
8102
8014
-
Leu
GAG
[ENA]
¡û
>W141815874
JQJL01000018
Actinomycetota
Nocardioides sp. UNC345MFTsu5.1 [JQJL]
213866
213780
-
Leu
GAG
[ENA]
¡û
>W1910141224
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
125886
125974
+
Leu
GAG
[ENA]
¡û
>W1910181531
BJMC01000009
Actinomycetota
Pimelobacter simplex NBRC 12069 [BJMC]
507886
507799
-
Leu
GAG
[ENA]
¡û
>W1910442436
FWFG01000013
Actinomycetota
Brachybacterium nesterenkovii CIP104813 [FWFG]
64623
64709
+
Leu
GAG
[ENA]
¡û
>W1911672101
QGDD01000002
Actinomycetota
Nocardioides sp. CCTCC AB 2018079 [QGDD]
525700
525788
+
Leu
GAG
[ENA]
¡û
>W1911768159
QXGH01000023
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
140445
140533
+
Leu
GAG
[ENA]
¡û
>W1911823543
QZVR01000001
Actinomycetota
Nocardioides sp. SZ4R5S7 [QZVR]
435242
435155
-
Leu
GAG
[ENA]
¡û
>W1810058065
PDJD01000001
Actinomycetota
Serinibacter salmoneus DSM 21801 [PDJD]
1509624
1509536
-
Leu
GAG
[ENA]
¡û
>W1810157296
PJBV01000014
Actinomycetota
Nocardioides alpinus DSM 23325 [PJBV]
308906
308820
-
Leu
GAG
[ENA]
¡û
>W1810201576
POAG01000017
Actinomycetota
Nocardioides sp. 616 [POAG]
335597
335683
+
Leu
GAG
[ENA]
¡û
>W1810427528
PYXZ01000011
Actinomycetota
Nocardioides currus IB-3 [PYXZ]
169807
169893
+
Leu
GAG
[ENA]
¡û
>W1810462661
PZYY01000003
Actinomycetota
Nocardioides terrigena KCTC 19217 [PZYY]
260069
260155
+
Leu
GAG
[ENA]
¡û
>W1810462736
PZYZ01000007
Actinomycetota
Nocardioides sediminis KCTC 19271 [PZYZ]
262948
262862
-
Leu
GAG
[ENA]
¡û
>W1810503987
QBKO01000002
Actinomycetota
Nocardioides sp. CF167 [QBKO]
231963
232049
+
Leu
GAG
[ENA]
¡û
>W1810539893
QDGZ01000002
Actinomycetota
Nocardioides gansuensis WSJ-1 [QDGZ]
390782
390696
-
Leu
GAG
[ENA]
¡û
>W1810577841
QEOO01000003
Actinomycetota
Nocardioides speluncae YIM ART13 [QEOO]
63646
63732
+
Leu
GAG
[ENA]
¡û
>W1810756457
QPFD01000005
Actinomycetota
Nocardioides houyundeii 601 [QPFD]
281938
281852
-
Leu
GAG
[ENA]
¡û
>C151061331
CP009896
Actinomycetota
Pimelobacter simplex VKM Ac-2033D [CP009896]
2680474
2680562
+
Leu
GAG
[Ensembl]
¡û
>W2010083031
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
125886
125974
+
Leu
GAG
[ENA]
¡û
>W2010095180
BJMC01000009
Actinomycetota
Pimelobacter simplex NBRC 12069 [BJMC]
507886
507799
-
Leu
GAG
[ENA]
¡û
>W2010309702
CABWLN010000016
Actinomycetota
Nocardioides sp. AX2bis [CABWLN]
165565
165478
-
Leu
GAG
[ENA]
¡û
>W2010405800
FWFG01000013
Actinomycetota
Brachybacterium nesterenkovii CIP104813 [FWFG]
64623
64709
+
Leu
GAG
[ENA]
¡û
>W2010521322
JAANMS010000014
Actinomycetota
Nocardioides sp. IC4_145 [JAANMS]
76275
76361
+
Leu
GAG
[ENA]
¡û
>W2010603307
JABJQY010000005
Actinomycetota
Nocardioides sp. zg-1308 [JABJQY]
442620
442534
-
Leu
GAG
[ENA]
¡û
>W2010603338
JABJQZ010000004
Actinomycetota
Nocardioides sp. zg-1230 [JABJQZ]
774963
774877
-
Leu
GAG
[ENA]
¡û
>W2010604554
JABJWT010000006
Actinomycetota
Nocardioides sp. MC1495 [JABJWT]
87180
87094
-
Leu
GAG
[ENA]
¡û
>W2010604578
JABJWU010000003
Actinomycetota
Nocardioides sp. Y192 [JABJWU]
183500
183588
+
Leu
GAG
[ENA]
¡û
>W2010668208
JACBZI010000001
Actinomycetota
Nocardioides marinus DSM 18248 [JACBZI]
1855526
1855614
+
Leu
GAG
[ENA]
¡û
>W2010668400
JACBZM010000001
Actinomycetota
Nocardioides aromaticivorans DSM 15131 [JACBZM]
4668542
4668456
-
Leu
GAG
[ENA]
¡û
>W2010669013
JACCAA010000001
Actinomycetota
Nocardioides daedukensis DSM 23819 [JACCAA]
610921
611007
+
Leu
GAG
[ENA]
¡û
>W2010670771
JACCBF010000001
Actinomycetota
Nocardioides kongjuensis DSM 19082 [JACCBF]
1448395
1448309
-
Leu
GAG
[ENA]
¡û
>W2010671594
JACCBW010000004
Actinomycetota
Nocardioides cavernae AT2.17 [JACCBW]
33351
33438
+
Leu
GAG
[ENA]
¡û
>W2010674828
JACCFP010000001
Actinomycetota
Nocardioides thalensis DSM 103833 [JACCFP]
2096323
2096411
+
Leu
GAG
[ENA]
¡û
>W2010681180
JACEFC010000019
Actinomycetota
Nocardioides sp. 1.0914 [JACEFC]
44323
44235
-
Leu
GAG
[ENA]
¡û
>W2010681820
JACEHF010000018
Actinomycetota
Nocardioides pelophilus CGMCC 4.7388 [JACEHF]
38194
38106
-
Leu
GAG
[ENA]
¡û
>W2010682114
JACEIC010000001
Actinomycetota
Nocardioides sp. CGMCC 1.13656 [JACEIC]
693685
693772
+
Leu
GAG
[ENA]
¡û
>W2010692027
JACGXA010000001
Actinomycetota
Nocardioides ginsengisegetis DSM 21349 [JACGXA]
1822299
1822387
+
Leu
GAG
[ENA]
¡û
>W2010715549
JACHWR010000003
Actinomycetota
Nocardioides soli DSM 105498 [JACHWR]
791765
791679
-
Leu
GAG
[ENA]
¡û
>W2010744170
JACKXE010000001
Actinomycetota
Nocardioides sp. KIGAM211 [JACKXE]
192127
192213
+
Leu
GAG
[ENA]
¡û
>W2011250491
QGDD01000002
Actinomycetota
Nocardioides sp. CCTCC AB 2018079 [QGDD]
525700
525788
+
Leu
GAG
[ENA]
¡û
>W2011325754
QXGH01000023
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
140445
140533
+
Leu
GAG
[ENA]
¡û
>W2011350533
QZVR01000001
Actinomycetota
Nocardioides sp. SZ4R5S7 [QZVR]
435242
435155
-
Leu
GAG
[ENA]
¡û
>W2011375477
RBLE01000005
Actinomycetota
Nocardioides sp. CF479 [RBLE]
39198
39285
+
Leu
GAG
[ENA]
¡û
>W2011417149
RHDV01000004
Actinomycetota
Nocardioides sp. X2025 [RHDV]
375742
375656
-
Leu
GAG
[ENA]
¡û
>W2011546752
SDKM01000031
Actinomycetota
Nocardioides sp. 130 [SDKM]
48968
49056
+
Leu
GAG
[ENA]
¡û
>W2011553259
SDWS01000001
Actinomycetota
Nocardioides glacieisoli HLT3-15 [SDWS]
780210
780124
-
Leu
GAG
[ENA]
¡û
>W2011553340
SDWT01000004
Actinomycetota
Nocardioides oleivorans CGMCC 4.6882 [SDWT]
35221
35307
+
Leu
GAG
[ENA]
¡û
>W2011553360
SDWU01000007
Actinomycetota
Nocardioides ganghwensis CGMCC 4.6875 [SDWU]
40568
40654
+
Leu
GAG
[ENA]
¡û
>W2011553397
SDWV01000003
Actinomycetota
Nocardioides sp. HLT2-9 [SDWV]
36621
36707
+
Leu
GAG
[ENA]
¡û
>W2011675899
SPUI01000002
Actinomycetota
Nocardioides sp. 503 [SPUI]
1143073
1142987
-
Leu
GAG
[ENA]
¡û
>W2011675951
SPUJ01000003
Actinomycetota
Nocardioides sp. 1609 [SPUJ]
457364
457450
+
Leu
GAG
[ENA]
¡û
>W2011680300
SRRO01000001
Actinomycetota
Nocardioides sp. MMS17-SY213 [SRRO]
4142670
4142756
+
Leu
GAG
[ENA]
¡û
>W2011693553
SSXI01000013
Actinomycetota
Nocardioides bacterium 21Sc5-5 [SSXI]
59134
59046
-
Leu
GAG
[ENA]
¡û
>W2011694903
STGK01000005
Actinomycetota
Nocardioides sp. GY 10113 [STGK]
209303
209217
-
Leu
GAG
[ENA]
¡û
>W2011695415
STGW01000025
Actinomycetota
Nocardioides caeni DSM 23134 [STGW]
1718
1806
+
Leu
GAG
[ENA]
¡û
>W2011753742
SZVU01000001
Actinomycetota
Nocardioides sp. 4053 [SZVU]
92462
92548
+
Leu
GAG
[ENA]
¡û
>W2011985424
VDMP01000024
Actinomycetota
Nocardioides albidus CCTCC AB 2015297 [VDMP]
312982
313070
+
Leu
GAG
[ENA]
¡û
>W2011985538
VDMR01000008
Actinomycetota
Nocardioides litoris DSM 103718 [VDMR]
208846
208760
-
Leu
GAG
[ENA]
¡û
>W2011985578
VDMS01000004
Actinomycetota
Nocardioides plantarum DSM 11054 [VDMS]
16521
16607
+
Leu
GAG
[ENA]
¡û
>W2012019478
VFNU01000001
Actinomycetota
Nocardioides sp. SLBN-35 [VFNU]
2910232
2910320
+
Leu
GAG
[ENA]
¡û
>W2012049827
VIYJ01000002
Actinomycetota
Nocardioides rubriscoriae DSM 23986 [VIYJ]
547322
547236
-
Leu
GAG
[ENA]
¡û
>W2012080365
VLJQ01000089
Actinomycetota
Nocardioides sp. J9 [VLJQ]
32830
32916
+
Leu
GAG
[ENA]
¡û
>W2012132418
VSSA01000001
Actinomycetota
Nocardioides sp. BGMRC 2183 [VSSA]
256082
256170
+
Leu
GAG
[ENA]
¡û
>W2012152154
VUJV01000008
Actinomycetota
Nocardioides sp. BN130099 [VUJV]
54053
54141
+
Leu
GAG
[ENA]
¡û
>W2012152162
VUJW01000001
Actinomycetota
Nocardioides sp. BN140041 [VUJW]
781314
781401
+
Leu
GAG
[ENA]
¡û
>W2012232886
WBVM01000001
Actinomycetota
Pimelobacter simplex Pch-N [WBVM]
1250958
1250871
-
Leu
GAG
[ENA]
¡û
>W2012369161
WLCI01000005
Actinomycetota
Nocardioides sp. zg-579 [WLCI]
246905
246993
+
Leu
GAG
[ENA]
¡û
>W2012369197
WLCJ01000001
Actinomycetota
Nocardioides sp. zg-578 [WLCJ]
35409
35497
+
Leu
GAG
[ENA]
¡û
>W2012426733
WSEK01000005
Actinomycetota
Nocardioides sp. MAH-18 [WSEK]
693685
693772
+
Leu
GAG
[ENA]
¡û
>W2110031969
BMMR01000001
Actinomycetota
Nocardioides deserti CGMCC 4.7183 [BMMR]
174389
174475
+
Leu
GAG
[ENA]
¡û
>W2110051345
BNAD01000016
Actinomycetota
Nocardioides flavus Wang et al. 2016 CGMCC 1.12791 [BNAD]
30902
30816
-
Leu
GAG
[ENA]
¡û
>W2110133161
CAKASO010000004
Actinomycetota
Nocardioides sp. Leaf374 [CAKASO]
103302
103388
+
Leu
GAG
[ENA]
¡û
>W2110221030
JACJGM010000003
Actinomycetota
Nocardioides lijunqiniae S-531 [JACJGM]
199424
199338
-
Leu
GAG
[ENA]
¡û
>W2110221075
JACJGN010000002
Actinomycetota
Nocardioides lijunqiniae 1598 [JACJGN]
106362
106448
+
Leu
GAG
[ENA]
¡û
>W2110239621
JACMYB010000008
Actinomycetota
Nocardioides sp. zg-1228 [JACMYB]
3060
2972
-
Leu
GAG
[ENA]
¡û
>W2110239623
JACMYC010000001
Actinomycetota
Nocardioides deserti SC8A-24 [JACMYC]
596970
596884
-
Leu
GAG
[ENA]
¡û
>W2110266310
JACUWQ010000001
Actinomycetota
Nocardioides sp. zg-578 [JACUWQ]
35409
35497
+
Leu
GAG
[ENA]
¡û
>W2110285428
JACXYX010000010
Actinomycetota
Nocardioides ganghwensis 9920 [JACXYX]
168023
167937
-
Leu
GAG
[ENA]
¡û
>W2110285455
JACXYY010000001
Actinomycetota
Nocardioides hwasunensis 19197 [JACXYY]
764782
764694
-
Leu
GAG
[ENA]
¡û
>W2110285538
JACXYZ010000005
Actinomycetota
Nocardioides cavernae KCTC 39551 [JACXYZ]
41754
41840
+
Leu
GAG
[ENA]
¡û
>W2110293190
JACYXZ010000002
Actinomycetota
Nocardioides sp. MJB4 [JACYXZ]
251800
251714
-
Leu
GAG
[ENA]
¡û
>W2110303418
JADCLI010000008
Actinomycetota
Pimelobacter simplex 3E [JADCLI]
44942
45028
+
Leu
GAG
[ENA]
¡û
>W2110303531
JADCLL010000001
Actinomycetota
Nocardioides kribbensis DSM 16314 [JADCLL]
189481
189567
+
Leu
GAG
[ENA]
¡û
>W2110319775
JADHZD010000008
Actinomycetota
Nocardioides sp. JXJ CY 38 [JADHZD]
35035
35123
+
Leu
GAG
[ENA]
¡û
>W2110327961
JADKPN010000011
Actinomycetota
Nocardioides islandensis KCTC 19275 [JADKPN]
152978
152890
-
Leu
GAG
[ENA]
¡û
>W2110441158
JAERJA010000008
Actinomycetota
Nocardioides sp. DJM-14 [JAERJA]
113790
113703
-
Leu
GAG
[ENA]
¡û
>W2110446392
JAERSG010000002
Actinomycetota
Nocardioides sp. G10 [JAERSG]
767363
767277
-
Leu
GAG
[ENA]
¡û
>W2110446481
JAERTX010000003
Actinomycetota
Nocardioides sp. zg-536 [JAERTX]
212885
212971
+
Leu
GAG
[ENA]
¡û
>W2110458340
JAFBBY010000001
Actinomycetota
Nocardioides nitrophenolicus DSM 15529 [JAFBBY]
5722473
5722386
-
Leu
GAG
[ENA]
¡û
>W2110458454
JAFBCA010000001
Actinomycetota
Nocardioides cavernae DSM 29950 [JAFBCA]
2845722
2845636
-
Leu
GAG
[ENA]
¡û
>W2110493773
JAFFJT010000014
Actinomycetota
Nocardioides sp. SYSU D00038 [JAFFJT]
49433
49345
-
Leu
GAG
[ENA]
¡û
>W2110516059
JAFMSW010000001
Actinomycetota
Nocardioides sp. SYSU D00514 [JAFMSW]
34103
34189
+
Leu
GAG
[ENA]
¡û
>W2110516104
JAFMSX010000001
Actinomycetota
Nocardioides sp. SYSU D00065 [JAFMSX]
33468
33554
+
Leu
GAG
[ENA]
¡û
>W2110516149
JAFMSY010000001
Actinomycetota
Nocardioides sp. SYSU D00778 [JAFMSY]
34008
34094
+
Leu
GAG
[ENA]
¡û
>W2110576025
JAGVQR010000001
Actinomycetota
Nocardioides sp. J2M5 [JAGVQR]
1818596
1818510
-
Leu
GAG
[ENA]
¡û
>W2110584091
JAGYYC010000007
Actinomycetota
Nocardioides sp. zg-ZUI104 [JAGYYC]
165168
165082
-
Leu
GAG
[ENA]
¡û
>W2110645631
JAHTKU010000008
Actinomycetota
Nocardioides daeguensis 2C1-5 [JAHTKU]
13710
13622
-
Leu
GAG
[ENA]
¡û
>C201147297
CP044344
Actinomycetota
Nocardioides sp. SB3-45 [CP044344]
1082177
1082263
+
Leu
GAG
-
¡û
>C201266423
CP053660
Actinomycetota
Nocardioides sp. zg-579 [CP053660]
2153401
2153313
-
Leu
GAG
-
¡û
>C211032007
CP022295
Actinomycetota
Nocardioides aromaticivorans IC177 [CP022295]
2634893
2634807
-
Leu
GAG
-
¡û
>C211032033
CP022296
Actinomycetota
Nocardioides sp. S5 [CP022296]
2664408
2664496
+
Leu
GAG
-
¡û
>C211095304
CP053928
Actinomycetota
Nocardioides sp. WS12 [CP053928]
3147709
3147623
-
Leu
GAG
-
¡û
>C211152976
CP061768
Actinomycetota
Nocardioides sp. MC1495 [CP061768]
2138841
2138927
+
Leu
GAG
-
¡û
>C211280942
CP070961
Actinomycetota
Nocardioides sp. zg-1228 [CP070961]
2166954
2167042
+
Leu
GAG
-
¡û
>C211330956
CP074406
Actinomycetota
Nocardioides sp. zg-536 [CP074406]
1969478
1969564
+
Leu
GAG
-
¡û
>C211336927
CP075371
Actinomycetota
Nocardioides aquaticus KCTC 9944 [CP075371]
2491998
2492085
+
Leu
GAG
-
¡û
>C211342525
CP076104
Actinomycetota
Nocardioides sp. LMS-CY [CP076104]
2776257
2776343
+
Leu
GAG
-
¡û
>W1510010506
BBLU01000012
Actinomycetota
Demequina mangrovi NBRC 105856 [BBLU]
89
1
-
Leu
GAG
[ENA]
¡û
>W1510010613
BBLX01000001
Actinomycetota
Demequina maris NBRC 109392 [BBLX]
416694
416606
-
Leu
GAG
[ENA]
¡û
>W1510010656
BBLY01000001
Actinomycetota
Demequina pelophila NBRC 109393 [BBLY]
323258
323346
+
Leu
GAG
[ENA]
¡û
>W1510010884
BBMC01000012
Actinomycetota
Demequina rhizosphaerae NBRC 109397 [BBMC]
53304
53392
+
Leu
GAG
[ENA]
¡û
>W1510010895
BBMD01000001
Actinomycetota
Demequina maris NBRC 109398 [BBMD]
919665
919577
-
Leu
GAG
[ENA]
¡û
>W1510010992
BBMF01000005
Actinomycetota
Demequina maris NBRC 110048 [BBMF]
54075
54163
+
Leu
GAG
[ENA]
¡û
>W1510011049
BBMG01000006
Actinomycetota
Demequina rhizosphaerae NBRC 110049 [BBMG]
219171
219083
-
Leu
GAG
[ENA]
¡û
>W1510011111
BBMH01000016
Actinomycetota
Demequina rhizosphaerae NBRC 110050 [BBMH]
63552
63640
+
Leu
GAG
[ENA]
¡û
>C231244817
CP087710
Actinomycetota
Nocardioides okcheonensis MMS20-HV4-12 [CP087710]
787822
787908
+
Leu
GAG
-
¡û
>C231252265
CP088262
Actinomycetota
Nocardioides sp. cx-173 [CP088262]
2279787
2279873
+
Leu
GAG
-
¡û
>C231319154
CP092535
Actinomycetota
Nocardioides sp. TF02-7 [CP092535]
4240795
4240881
+
Leu
GAG
-
¡û
>W2110752425
NHTS01000007
Actinomycetota
Pimelobacter sp. 30-1 [NHTS]
327364
327278
-
Leu
GAG
[ENA]
¡û
>C231368845
CP096276
Actinomycetota
Pimelobacter simplex N40 [CP096276]
1802983
1803069
+
Leu
GAG
-
¡û
>C231395605
CP097984
Actinomycetota
Pimelobacter simplex N39 [CP097984]
4134521
4134607
+
Leu
GAG
-
¡û
>C241138100
CP049866
Actinomycetota
Nocardioides piscis HDW12A [CP049866]
3057683
3057769
+
Leu
GAG
-
¡û
>C241147625
CP050902
Actinomycetota
Nocardioides sp. JQ2195 [CP050902]
1880379
1880465
+
Leu
GAG
-
¡û
>C241176459
CP059164
Actinomycetota
Nocardioides ungokensis LMG 28591 [CP059164]
2402411
2402323
-
Leu
GAG
-
¡û
>C241221136
CP113431
Actinomycetota
Nocardioides sp. Arc9.136 [CP113431]
2113982
2113895
-
Leu
GAG
-
¡û
>C241254002
CP124681
Actinomycetota
Nocardioides sp. QY071 [CP124681]
2803784
2803696
-
Leu
GAG
-
¡û
>W1610048768
BBEJ01001242
Actinomycetota
Nocardioides sp. DN36 [BBEJ]
376
464
+
Leu
GAG
[ENA]
¡û
>W1610050509
BBFY01000011
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BBFY]
488
574
+
Leu
GAG
[ENA]
¡û
>W1610050761
BBGE01000805
Actinomycetota
Nocardioides nitrophenolicus JCM 10703 [BBGE]
131
219
+
Leu
GAG
[ENA]
¡û
>W1610051417
BBGV01001756
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
246
158
-
Leu
GAG
[ENA]
¡û
>W1610068465
BCRJ01000004
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BCRJ]
83596
83682
+
Leu
GAG
[ENA]
¡û
>W1610723191
LMDE01000016
Actinomycetota
Nocardioides sp. Root122 [LMDE]
114206
114120
-
Leu
GAG
[ENA]
¡û
>W1610724044
LMDV01000001
Actinomycetota
Nocardioides sp. Root1257 [LMDV]
179800
179714
-
Leu
GAG
[ENA]
¡û
>W1610726027
LMFI01000001
Actinomycetota
Nocardioides sp. Root140 [LMFI]
1203494
1203408
-
Leu
GAG
[ENA]
¡û
>W1610727259
LMGG01000004
Actinomycetota
Nocardioides sp. Root151 [LMGG]
852404
852318
-
Leu
GAG
[ENA]
¡û
>W1610728003
LMGV01000010
Actinomycetota
Nocardioides sp. Root614 [LMGV]
261101
261013
-
Leu
GAG
[ENA]
¡û
>W1610728696
LMHJ01000005
Actinomycetota
Nocardioides sp. Root682 [LMHJ]
262969
262881
-
Leu
GAG
[ENA]
¡û
>W1610729500
LMIA01000012
Actinomycetota
Nocardioides sp. Root190 [LMIA]
149581
149493
-
Leu
GAG
[ENA]
¡û
>W1610730064
LMIN01000001
Actinomycetota
Nocardioides sp. Root224 [LMIN]
179780
179694
-
Leu
GAG
[ENA]
¡û
>W1610730183
LMIP01000013
Actinomycetota
Nocardioides sp. Root79 [LMIP]
269609
269521
-
Leu
GAG
[ENA]
¡û
>W1610730350
LMIT01000002
Actinomycetota
Nocardioides sp. Root240 [LMIT]
763640
763552
-
Leu
GAG
[ENA]
¡û
>W1610736415
LMNH01000003
Actinomycetota
Nocardioides sp. Leaf285 [LMNH]
1076934
1076848
-
Leu
GAG
[ENA]
¡û
>W1610737204
LMNY01000001
Actinomycetota
Nocardioides sp. Leaf307 [LMNY]
1830697
1830611
-
Leu
GAG
[ENA]
¡û
>W1610743024
LMSM01000011
Actinomycetota
Nocardioides sp. Soil774 [LMSM]
130943
130857
-
Leu
GAG
[ENA]
¡û
>W1610743039
LMSN01000008
Actinomycetota
Nocardioides sp. Soil777 [LMSN]
34794
34708
-
Leu
GAG
[ENA]
¡û
>W1610743222
LMSQ01000012
Actinomycetota
Nocardioides sp. Soil796 [LMSQ]
152590
152504
-
Leu
GAG
[ENA]
¡û
>W1610743275
LMSR01000015
Actinomycetota
Nocardioides sp. Soil797 [LMSR]
188551
188465
-
Leu
GAG
[ENA]
¡û
>W1610743428
LMSU01000003
Actinomycetota
Nocardioides sp. Soil805 [LMSU]
461086
461000
-
Leu
GAG
[ENA]
¡û
>W1610937798
LUPF01000001
Actinomycetota
Nocardioides sp. REDSEA-S22_B2 [LUPF]
30811
30723
-
Leu
GAG
[ENA]
¡û
>W1610937895
LUPH01000148
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
8658
8746
+
Leu
GAG
[ENA]
¡û
>W1610937898
LUPH01000234
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
2805
2717
-
Leu
GAG
[ENA]
¡û
>W1610937910
LUPI01000008
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
184306
184394
+
Leu
GAG
[ENA]
¡û
>W1610937975
LUPJ01000150
Actinomycetota
Nocardioides sp. REDSEA-S31_B4 [LUPJ]
11939
12027
+
Leu
GAG
[ENA]
¡û
>W1610938030
LUPK01000059
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
103763
103675
-
Leu
GAG
[ENA]
¡û
>W1610938054
LUPL01000071
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
47529
47617
+
Leu
GAG
[ENA]
¡û
>W1610938094
LUPM01000230
Actinomycetota
Nocardioides sp. REDSEA-S36_B10 [LUPM]
1967
2055
+
Leu
GAG
[ENA]
¡û
>W1610938132
LUPN01000221
Actinomycetota
Nocardioides sp. REDSEA-S37_B12 [LUPN]
2793
2705
-
Leu
GAG
[ENA]
¡û
>W1610938153
LUPO01000006
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
178047
178135
+
Leu
GAG
[ENA]
¡û
>W1610938188
LUPP01000010
Actinomycetota
Nocardioides sp. REDSEA-S40_B4 [LUPP]
141959
142047
+
Leu
GAG
[ENA]
¡û
>W1610938258
LUPQ01000120
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
87670
87758
+
Leu
GAG
[ENA]
¡û
>WENV081103
ABEF01028270
Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
434
346
-
Leu
GAG
[ENA]
>W1710045240
BBEJ01001242
Actinomycetota
Nocardioides sp. DN36 [BBEJ]
376
464
+
Leu
GAG
[ENA]
¡û
>W1710046908
BBFY01000011
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BBFY]
488
574
+
Leu
GAG
[ENA]
¡û
>W1710047160
BBGE01000805
Actinomycetota
Nocardioides nitrophenolicus JCM 10703 [BBGE]
131
219
+
Leu
GAG
[ENA]
¡û
>W1710047795
BBGV01001756
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
246
158
-
Leu
GAG
[ENA]
¡û
>W1710050260
BBRH01000019
Actinomycetota
Demequina sp. NBRC 110051 [BBRH]
43596
43684
+
Leu
GAG
[ENA]
¡û
>W1710065838
BCRJ01000004
Actinomycetota
Nocardioides jensenii JCM 1364 = NBRC 14755 [BCRJ]
83596
83682
+
Leu
GAG
[ENA]
¡û
>W1710534288
FNRT01000002
Actinomycetota
Nocardioides exalbidus [FNRT]
3936624
3936710
+
Leu
GAG
[ENA]
¡û
>W1710542682
FNZI01000009
Actinomycetota
Demequina mangrovi [FNZI]
279
191
-
Leu
GAG
[ENA]
¡û
>W1710556300
FOKC01000006
Actinomycetota
Nocardioides alpinus [FOKC]
36479
36565
+
Leu
GAG
[ENA]
¡û
>W1710569412
FOUK01000003
Actinomycetota
Pimelobacter simplex [FOUK]
98456
98544
+
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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