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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.8615 (238 seq.)
>W1710891127
LNCO01000017
Gammaproteobacteria
Pasteurella multocida [LNCO]
31345
31437
+
Ser
GCT
[ENA]
¡û
>W1710926096
LODS01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LODS]
187134
187226
+
Ser
GCT
[ENA]
¡û
>W1710998966
LQCZ01000023
Gammaproteobacteria
Pasteurella multocida [LQCZ]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999077
LQDC01000029
Gammaproteobacteria
Pasteurella multocida [LQDC]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999188
LQDE01000029
Gammaproteobacteria
Pasteurella multocida [LQDE]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999327
LQDI01000041
Gammaproteobacteria
Pasteurella multocida [LQDI]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999453
LQDL01000026
Gammaproteobacteria
Pasteurella multocida [LQDL]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999660
LQDQ01000033
Gammaproteobacteria
Pasteurella multocida [LQDQ]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999743
LQDS01000030
Gammaproteobacteria
Pasteurella multocida [LQDS]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999866
LQDW01000023
Gammaproteobacteria
Pasteurella multocida [LQDW]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1710999934
LQDY01000006
Gammaproteobacteria
Pasteurella multocida [LQDY]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000028
LQEA01000006
Gammaproteobacteria
Pasteurella multocida [LQEA]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000124
LQEC01000018
Gammaproteobacteria
Pasteurella multocida [LQEC]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000183
LQEE01000021
Gammaproteobacteria
Pasteurella multocida [LQEE]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000326
LQEH01000028
Gammaproteobacteria
Pasteurella multocida [LQEH]
2902
2994
+
Ser
GCT
[ENA]
¡û
>W1711000378
LQEI01000030
Gammaproteobacteria
Pasteurella multocida [LQEI]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000488
LQEL01000001
Gammaproteobacteria
Pasteurella multocida [LQEL]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000612
LQEN01000030
Gammaproteobacteria
Pasteurella multocida [LQEN]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000702
LQEQ01000021
Gammaproteobacteria
Pasteurella multocida [LQEQ]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000803
LQES01000024
Gammaproteobacteria
Pasteurella multocida [LQES]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711000865
LQET01000032
Gammaproteobacteria
Pasteurella multocida [LQET]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001146
LQFA01000030
Gammaproteobacteria
Pasteurella multocida [LQFA]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001177
LQFB01000003
Gammaproteobacteria
Pasteurella multocida [LQFB]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001308
LQFE01000011
Gammaproteobacteria
Pasteurella multocida [LQFE]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001433
LQFH01000031
Gammaproteobacteria
Pasteurella multocida [LQFH]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001517
LQFJ01000026
Gammaproteobacteria
Pasteurella multocida [LQFJ]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001613
LQFL01000005
Gammaproteobacteria
Pasteurella multocida [LQFL]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711001939
LQFT01000004
Gammaproteobacteria
Pasteurella multocida [LQFT]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002026
LQFV01000033
Gammaproteobacteria
Pasteurella multocida [LQFV]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002146
LQFY01000001
Gammaproteobacteria
Pasteurella multocida [LQFY]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002279
LQGB01000031
Gammaproteobacteria
Pasteurella multocida [LQGB]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002760
LQGM01000024
Gammaproteobacteria
Pasteurella multocida [LQGM]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002769
LQGN01000003
Gammaproteobacteria
Pasteurella multocida [LQGN]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002822
LQGO01000010
Gammaproteobacteria
Pasteurella multocida [LQGO]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002883
LQGP01000039
Gammaproteobacteria
Pasteurella multocida [LQGP]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711002958
LQGR01000021
Gammaproteobacteria
Pasteurella multocida [LQGR]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711003012
LQGS01000038
Gammaproteobacteria
Pasteurella multocida [LQGS]
10311
10403
+
Ser
GCT
[ENA]
¡û
>W1711117117
LUCX01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCX]
171447
171355
-
Ser
GCT
[ENA]
¡û
>W1711117170
LUCY01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCY]
171318
171226
-
Ser
GCT
[ENA]
¡û
>W1711117221
LUCZ01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCZ]
171447
171355
-
Ser
GCT
[ENA]
¡û
>W1711117265
LUDA01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDA]
188217
188309
+
Ser
GCT
[ENA]
¡û
>W1711117325
LUDB01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDB]
164643
164551
-
Ser
GCT
[ENA]
¡û
>W1711117379
LUDC01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDC]
175189
175097
-
Ser
GCT
[ENA]
¡û
>W1711117418
LUDD01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDD]
189182
189274
+
Ser
GCT
[ENA]
¡û
>W1711117484
LUDE01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDE]
171314
171222
-
Ser
GCT
[ENA]
¡û
>W1711117521
LUDF01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDF]
175124
175032
-
Ser
GCT
[ENA]
¡û
>W1711252328
LYOX01000046
Gammaproteobacteria
Pasteurella multocida subsp. septica [LYOX]
68365
68457
+
Ser
GCT
[ENA]
¡û
>W1711376068
MDXJ01000011
Gammaproteobacteria
Pasteurella multocida [MDXJ]
209322
209414
+
Ser
GCT
[ENA]
¡û
>W1711384496
MEDF01000001
Gammaproteobacteria
Pasteurella multocida [MEDF]
10954
11046
+
Ser
GCT
[ENA]
¡û
>W1711466066
MJMB01000009
Gammaproteobacteria
Rodentibacter pneumotropicus [MJMB]
43645
43553
-
Ser
GCT
[ENA]
¡û
>W1711509756
MKZZ01000018
Gammaproteobacteria
Rodentibacter pneumotropicus [MKZZ]
7438
7530
+
Ser
GCT
[ENA]
¡û
>W1711509833
MLAB01000020
Gammaproteobacteria
Rodentibacter heylii [MLAB]
7426
7518
+
Ser
GCT
[ENA]
¡û
>W1711509880
MLAC01000050
Gammaproteobacteria
Rodentibacter heylii [MLAC]
28884
28792
-
Ser
GCT
[ENA]
¡û
>W1711509932
MLAD01000077
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAD]
7426
7518
+
Ser
GCT
[ENA]
¡û
>W1711509987
MLAE01000063
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAE]
7540
7632
+
Ser
GCT
[ENA]
¡û
>W1711510039
MLAG01000003
Gammaproteobacteria
Rodentibacter ratti [MLAG]
22008
21916
-
Ser
GCT
[ENA]
¡û
>W1711510107
MLAH01000027
Gammaproteobacteria
Rodentibacter ratti [MLAH]
12964
12872
-
Ser
GCT
[ENA]
¡û
>W1711510170
MLAI01000022
Gammaproteobacteria
Rodentibacter ratti [MLAI]
19369
19277
-
Ser
GCT
[ENA]
¡û
>W1711510220
MLAJ01000009
Gammaproteobacteria
Rodentibacter ratti [MLAJ]
7428
7520
+
Ser
GCT
[ENA]
¡û
>W1711515107
MLHG01000042
Gammaproteobacteria
Rodentibacter mrazii [MLHG]
39295
39203
-
Ser
GCT
[ENA]
¡û
>W1711515434
MLHN01000011
Gammaproteobacteria
Rodentibacter genomosp. 1 [MLHN]
177500
177592
+
Ser
GCT
[ENA]
¡û
>W1711515472
MLHO01000041
Gammaproteobacteria
Rodentibacter genomosp. 2 [MLHO]
36640
36548
-
Ser
GCT
[ENA]
¡û
>W1711515537
MLHP01000028
Gammaproteobacteria
Rodentibacter genomosp. 2 [MLHP]
46891
46799
-
Ser
GCT
[ENA]
¡û
>W1711515633
MLHR01000036
Gammaproteobacteria
Rodentibacter pneumotropicus [MLHR]
7439
7531
+
Ser
GCT
[ENA]
¡û
>W1711515685
MLHS01000057
Gammaproteobacteria
Rodentibacter sp. Ppn85 [MLHS]
7349
7441
+
Ser
GCT
[ENA]
¡û
>W1711714593
MTDZ01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTDZ]
168802
168894
+
Ser
GCT
[ENA]
¡û
>W1711714640
MTEA01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTEA]
168802
168894
+
Ser
GCT
[ENA]
¡û
>W1711714680
MTEB01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [MTEB]
71315
71407
+
Ser
GCT
[ENA]
¡û
>W1711714725
MTEC01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [MTEC]
71315
71407
+
Ser
GCT
[ENA]
¡û
>W1711714776
MTED01000002
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTED]
188051
188143
+
Ser
GCT
[ENA]
¡û
>W1711714813
MTEE01000002
Gammaproteobacteria
Pasteurella multocida subsp. multocida [MTEE]
90737
90829
+
Ser
GCT
[ENA]
¡û
>W1711714872
MTEF01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTEF]
235677
235769
+
Ser
GCT
[ENA]
¡û
>W1711719448
MTIE01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIE]
187998
188090
+
Ser
GCT
[ENA]
¡û
>W1711719495
MTIF01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIF]
187804
187896
+
Ser
GCT
[ENA]
¡û
>W1711719551
MTIG01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIG]
187655
187747
+
Ser
GCT
[ENA]
¡û
>W1711719603
MTIH01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIH]
187991
188083
+
Ser
GCT
[ENA]
¡û
>W1711719636
MTII01000002
Gammaproteobacteria
Pasteurella multocida subsp. multocida [MTII]
92917
93009
+
Ser
GCT
[ENA]
¡û
>W1711719703
MTIJ01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIJ]
187828
187920
+
Ser
GCT
[ENA]
¡û
>W1711719741
MTIK01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIK]
188065
188157
+
Ser
GCT
[ENA]
¡û
>W1711719794
MTIL01000003
Gammaproteobacteria
Pasteurella multocida subsp. septica [MTIL]
188191
188283
+
Ser
GCT
[ENA]
¡û
>W1711765974
MUXZ01000012
Gammaproteobacteria
Canicola haemoglobinophilus [MUXZ]
62599
62691
+
Ser
GCT
[ENA]
¡û
>W1711956307
NBTG01000002
Gammaproteobacteria
Pasteurella multocida [NBTG]
1359706
1359614
-
Ser
GCT
[ENA]
¡û
>W1711956349
NBTH01000006
Gammaproteobacteria
Pasteurella multocida [NBTH]
1859867
1859775
-
Ser
GCT
[ENA]
¡û
>W1711956383
NBTI01000001
Gammaproteobacteria
Pasteurella multocida [NBTI]
15896
15804
-
Ser
GCT
[ENA]
¡û
>W1711956482
NBTJ01000001
Gammaproteobacteria
Pasteurella multocida [NBTJ]
702967
702875
-
Ser
GCT
[ENA]
¡û
>C171000363
CP007040
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. HN07 [CP007040]
111697
111789
+
Ser
GCT
-
¡û
>C171032582
CP014618
Gammaproteobacteria
Pasteurella multocida Pm-3 [CP014618]
1394044
1393952
-
Ser
GCT
-
¡û
>C171070642
CP017961
Gammaproteobacteria
Pasteurella multocida Razi_Pm0001 [CP017961]
84262
84170
-
Ser
GCT
-
¡û
>C171089031
CP019081
Gammaproteobacteria
Pasteurella multocida Razi 0002 [CP019081]
1175922
1176014
+
Ser
GCT
-
¡û
>C171105076
CP020345
Gammaproteobacteria
Pasteurella multocida subsp. multocida CIRMBP-0884 [CP020345]
631421
631329
-
Ser
GCT
-
¡û
>C171105134
CP020347
Gammaproteobacteria
Pasteurella multocida subsp. septica CIRMBP-0873 [CP020347]
281376
281284
-
Ser
GCT
-
¡û
>C171106149
CP020403
Gammaproteobacteria
Pasteurella multocida FDAARGOS_216 [CP020403]
778923
778831
-
Ser
GCT
-
¡û
>C171106211
CP020405
Gammaproteobacteria
Pasteurella multocida FDAARGOS_218 [CP020405]
356615
356523
-
Ser
GCT
-
¡û
>W131165797
ARBW01000003
Gammaproteobacteria
Rodentibacter pneumotropicus DSM 21403 [ARBW]
7714
7806
+
Ser
GCT
[ENA]
¡û
>W131186747
ARWR01000002
Gammaproteobacteria
Pasteurella multocida 671/90 [ARWR]
175065
174973
-
Ser
GCT
[ENA]
¡û
>W131203746
ASZP01000005
Gammaproteobacteria
Pasteurella multocida subsp. gallicida P1062 [ASZP]
46094
46002
-
Ser
GCT
[ENA]
¡û
>C017262
AE004439
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. Pm70 [AE004439]
1246712
1246620
-
Ser
GCT
[Ensembl]
¡û
>W141039563
ALYC02000002
Gammaproteobacteria
Pasteurella multocida subsp. multocida VTCCBAA264 [ALYC]
65270
65362
+
Ser
GCT
[ENA]
¡û
>W141041066
AMBP01000011
Gammaproteobacteria
Pasteurella multocida subsp. gallicida X73 [AMBP]
171190
171098
-
Ser
GCT
[ENA]
¡û
>W141041112
AMBQ01000021
Gammaproteobacteria
Pasteurella multocida subsp. gallicida P1059 [AMBQ]
164519
164427
-
Ser
GCT
[ENA]
¡û
>W141144288
AWTD01000005
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. PMTB [AWTD]
164536
164444
-
Ser
GCT
[ENA]
¡û
>WENV181472638
OGEZ01005016
[OGEZ] metagenome; Human gut stool
134
42
-
Ser
GCT
[ENA]
¢þ
>WENV181491183
OGFX01004353
[OGFX] metagenome; Human gut stool
1071
979
-
Ser
GCT
[ENA]
¢þ
>WENV181636317
OGMZ01004136
[OGMZ] metagenome; Human gut stool
171
79
-
Ser
GCT
[ENA]
¢þ
>W141237197
BBIX01000006
Gammaproteobacteria
Rodentibacter pneumotropicus pneumotropica [BBIX]
156961
156869
-
Ser
GCT
[ENA]
¡û
>WENV182481525
OIRB01011305
[OIRB] human gut metagenome; human gut
176
84
-
Ser
GCT
[ENA]
¢þ
>WENV182501968
OIUG01007070
[OIUG] human gut metagenome; human gut
239
331
+
Ser
GCT
[ENA]
¢þ
>WENV182984250
OKZL01001961
[OKZL] human gut metagenome; human gut
829
921
+
Ser
GCT
[ENA]
¢þ
>WENV183471345
OMEM01008105
[OMEM] human gut metagenome; feces
360
268
-
Ser
GCT
[ENA]
¢þ
>WENV183607357
OODO01004765
[OODO] human gut metagenome; human gut
5355
5447
+
Ser
GCT
[ENA]
¢þ
>WENV183704254
PDWI01000117
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
108288
108380
+
Ser
GCT
[ENA]
¢þ
>WENV183709253
PDWI01026021
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5398
5487
+
Ser
GCT
[ENA]
¢þ
>WENV183710174
PDWI01041018
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3901
3991
+
Ser
GCT
[ENA]
¢þ
>WENV183715891
PDWI01271055
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
972
1062
+
Ser
GCT
[ENA]
¢þ
>C181017757
CP015558
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60494 [CP015558]
590471
590563
+
Ser
GCT
-
¡û
>C181017833
CP015559
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60215 [CP015559]
1709374
1709282
-
Ser
GCT
-
¡û
>C181017889
CP015560
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60717 [CP015560]
1740816
1740724
-
Ser
GCT
-
¡û
>C181017925
CP015561
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60213 [CP015561]
589834
589926
+
Ser
GCT
-
¡û
>C181017983
CP015562
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-59910 [CP015562]
639923
640015
+
Ser
GCT
-
¡û
>C181018037
CP015563
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60380 [CP015563]
590333
590425
+
Ser
GCT
-
¡û
>C181018093
CP015564
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60713 [CP015564]
588613
588705
+
Ser
GCT
-
¡û
>C181018148
CP015565
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60224 [CP015565]
589557
589649
+
Ser
GCT
-
¡û
>C181018205
CP015566
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60712 [CP015566]
590021
590113
+
Ser
GCT
-
¡û
>C181018260
CP015567
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60675 [CP015567]
590463
590555
+
Ser
GCT
-
¡û
>C181018318
CP015568
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60248 [CP015568]
590020
590112
+
Ser
GCT
-
¡û
>C181018376
CP015569
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60385 [CP015569]
1074658
1074750
+
Ser
GCT
-
¡û
>C181018454
CP015570
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-59962 [CP015570]
1751090
1750998
-
Ser
GCT
-
¡û
>C181018490
CP015571
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60214 [CP015571]
1075255
1075347
+
Ser
GCT
-
¡û
>C181018564
CP015572
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60381 [CP015572]
1709833
1709741
-
Ser
GCT
-
¡û
>C181018598
CP015573
Gammaproteobacteria
Pasteurella multocida USDA-ARS-USMARC-60714 [CP015573]
589112
589204
+
Ser
GCT
-
¡û
>C181083416
CP023516
Gammaproteobacteria
Pasteurella multocida FDAARGOS_384 [CP023516]
1814099
1814191
+
Ser
GCT
-
¡û
>C181092644
CP023972
Gammaproteobacteria
Pasteurella multocida FDAARGOS_385 [CP023972]
1883429
1883521
+
Ser
GCT
-
¡û
>C181139021
CP026744
Gammaproteobacteria
Pasteurella multocida 161215033201-1 [CP026744]
837078
837170
+
Ser
GCT
-
¡û
>C181143371
CP026859
Gammaproteobacteria
Pasteurella multocida 12601 [CP026859]
150823
150915
+
Ser
GCT
-
¡û
>C181170029
CP028926
Gammaproteobacteria
Pasteurella multocida 20N [CP028926]
347395
347303
-
Ser
GCT
-
¡û
>C181170076
CP028927
Gammaproteobacteria
Pasteurella multocida 9N [CP028927]
1245980
1245888
-
Ser
GCT
-
¡û
>C181183957
CP029712
Gammaproteobacteria
Pasteurella multocida 3358 [CP029712]
82064
82156
+
Ser
GCT
-
¡û
>C181201844
CP031551
Gammaproteobacteria
Pasteurella multocida PM8-1 [CP031551]
1749273
1749365
+
Ser
GCT
-
¡û
>C181201901
CP031552
Gammaproteobacteria
Pasteurella multocida TB168 [CP031552]
1839164
1839256
+
Ser
GCT
-
¡û
>C181201960
CP031553
Gammaproteobacteria
Pasteurella multocida EB168 [CP031553]
1746696
1746788
+
Ser
GCT
-
¡û
>C181202018
CP031554
Gammaproteobacteria
Pasteurella multocida BS168 [CP031554]
1750306
1750398
+
Ser
GCT
-
¡û
>C181215723
LS483473
Gammaproteobacteria
Pasteurella multocida NCTC10382 [LS483473]
104168
104260
+
Ser
GCT
-
¡û
>C181225392
LT906458
Gammaproteobacteria
Pasteurella multocida NCTC10322 [LT906458]
102401
102493
+
Ser
GCT
-
¡û
>C191153894
CP037861
Gammaproteobacteria
Pasteurella multocida subsp. multocida HN01 [CP037861]
101394
101486
+
Ser
GCT
-
¡û
>C191154072
CP037865
Gammaproteobacteria
Pasteurella multocida subsp. multocida HN02 [CP037865]
1248611
1248519
-
Ser
GCT
-
¡û
>C191162733
CP038871
Gammaproteobacteria
Pasteurella multocida FCf15 [CP038871]
2234847
2234755
-
Ser
GCT
-
¡û
>C191162797
CP038872
Gammaproteobacteria
Pasteurella multocida FCf71 [CP038872]
1880858
1880766
-
Ser
GCT
-
¡û
>C191162854
CP038873
Gammaproteobacteria
Pasteurella multocida FCf45 [CP038873]
2156425
2156517
+
Ser
GCT
-
¡û
>C191162929
CP038874
Gammaproteobacteria
Pasteurella multocida FCf76 [CP038874]
505904
505812
-
Ser
GCT
-
¡û
>C191162945
CP038875
Gammaproteobacteria
Pasteurella multocida FCf83 [CP038875]
104172
104264
+
Ser
GCT
-
¡û
>C191184195
CP040918
Gammaproteobacteria
Pasteurella multocida PM 8-6 [CP040918]
1748618
1748710
+
Ser
GCT
-
¡û
>C191204885
LR134298
Gammaproteobacteria
Pasteurella multocida subsp. gallicida NCTC10204 [LR134298]
1096655
1096747
+
Ser
GCT
-
¡û
>C191212196
LR134488
Gammaproteobacteria
Pasteurella multocida NCTC8282 [LR134488]
39192
39284
+
Ser
GCT
-
¡û
>C191213505
LR134514
Gammaproteobacteria
Pasteurella multocida subsp. septica NCTC11619 [LR134514]
105849
105941
+
Ser
GCT
-
¡û
>C191214392
LR134532
Gammaproteobacteria
Pasteurella multocida NCTC10323 [LR134532]
140101
140193
+
Ser
GCT
-
¡û
>W141740112
JNOK01000005
Gammaproteobacteria
Pasteurella multocida [JNOK]
210873
210965
+
Ser
GCT
[ENA]
¡û
>W141740163
JNOL01000005
Gammaproteobacteria
Pasteurella multocida [JNOL]
210635
210727
+
Ser
GCT
[ENA]
¡û
>C141001345
CP003328
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. HB03 [CP003328]
102161
102253
+
Ser
GCT
[Ensembl]
¡û
>W1910617639
LIUN01000002
Gammaproteobacteria
Pasteurella multocida CQ2 [LIUN]
150194
150286
+
Ser
GCT
[ENA]
¡û
>W1910617685
LIUO01000023
Gammaproteobacteria
Pasteurella multocida CQ6 [LIUO]
10301
10393
+
Ser
GCT
[ENA]
¡û
>W1910617703
LIUP01000007
Gammaproteobacteria
Pasteurella multocida B [LIUP]
6369
6461
+
Ser
GCT
[ENA]
¡û
>W1910634611
LLKR01000038
Gammaproteobacteria
Pasteurella multocida subsp. multocida UNMSM2 [LLKR]
34141
34233
+
Ser
GCT
[ENA]
¡û
>W1910656876
MANI01000004
Gammaproteobacteria
Pasteurella multocida C48-1 [MANI]
173182
173090
-
Ser
GCT
[ENA]
¡û
>W1910657258
MAPQ01000004
Gammaproteobacteria
Pasteurella multocida C51-17 [MAPQ]
171118
171026
-
Ser
GCT
[ENA]
¡û
>W1910657303
MAPR01000005
Gammaproteobacteria
Pasteurella multocida C51-3 [MAPR]
171400
171308
-
Ser
GCT
[ENA]
¡û
>W1910657344
MAPS01000002
Gammaproteobacteria
Pasteurella multocida Pm731 [MAPS]
173191
173099
-
Ser
GCT
[ENA]
¡û
>W1910657408
MAPT01000007
Gammaproteobacteria
Pasteurella multocida Pm72-4 [MAPT]
171254
171162
-
Ser
GCT
[ENA]
¡û
>W1910658138
MBAG01000002
Gammaproteobacteria
Pasteurella multocida C51-2 [MBAG]
171588
171496
-
Ser
GCT
[ENA]
¡û
>W1910927450
NIOC01000014
Gammaproteobacteria
Pasteurella multocida SKN1 [NIOC]
17569
17661
+
Ser
GCT
[ENA]
¡û
>W1911179298
NQMU01000005
Gammaproteobacteria
Pasteurella multocida SH01 [NQMU]
164463
164371
-
Ser
GCT
[ENA]
¡û
>W1911203905
NRHC01000057
Gammaproteobacteria
Psittacicella hinzii 44 str. B96_3 [NRHC]
32862
32954
+
Ser
GCT
[ENA]
¡û
>W1911205783
NRJF01000240
Gammaproteobacteria
Psittacicella gerlachiana 44 str. EEAB3T1 [NRJF]
2025
2117
+
Ser
GCT
[ENA]
¡û
>W1911205869
NRJH01000057
Gammaproteobacteria
Psittacicella melopsittaci 44 str. B96_4 [NRJH]
29918
29826
-
Ser
GCT
[ENA]
¡û
>W1911410154
NWTL01000003
Gammaproteobacteria
Pasteurella multocida SH02 [NWTL]
164465
164373
-
Ser
GCT
[ENA]
¡û
>W1911410484
NWTS01000004
Gammaproteobacteria
Pasteurella multocida SH03 [NWTS]
175034
174942
-
Ser
GCT
[ENA]
¡û
>W1911410520
NWTT01000002
Gammaproteobacteria
Pasteurella multocida SH05 [NWTT]
108270
108178
-
Ser
GCT
[ENA]
¡û
>W1911410586
NWTU01000003
Gammaproteobacteria
Pasteurella multocida SH06 [NWTU]
175497
175405
-
Ser
GCT
[ENA]
¡û
>W1911411037
NWUD01000002
Gammaproteobacteria
Pasteurella multocida SH04 [NWUD]
174731
174639
-
Ser
GCT
[ENA]
¡û
>W1911424267
NXGB01000001
Gammaproteobacteria
Pasteurella oralis WCHPO000540 [NXGB]
239301
239393
+
Ser
GCT
[ENA]
¡û
>W1911775438
QXND01000006
Gammaproteobacteria
Rodentibacter pneumotropicus 394_12 [QXND]
20408
20316
-
Ser
GCT
[ENA]
¡û
>W1911775486
QXNE01000005
Gammaproteobacteria
Rodentibacter pneumotropicus 602_16 [QXNE]
34732
34640
-
Ser
GCT
[ENA]
¡û
>W1911775579
QXNG01000073
Gammaproteobacteria
Rodentibacter pneumotropicus 1596_07 [QXNG]
10484
10392
-
Ser
GCT
[ENA]
¡û
>W1911775609
QXNH01000034
Gammaproteobacteria
Rodentibacter pneumotropicus 607_10 [QXNH]
10580
10488
-
Ser
GCT
[ENA]
¡û
>W1911775669
QXNI01000063
Gammaproteobacteria
Rodentibacter pneumotropicus Ac84 [QXNI]
7434
7526
+
Ser
GCT
[ENA]
¡û
>W1911775703
QXNJ01000027
Gammaproteobacteria
Rodentibacter pneumotropicus 691_11 [QXNJ]
10684
10592
-
Ser
GCT
[ENA]
¡û
>W1911775735
QXNK01000015
Gammaproteobacteria
Rodentibacter pneumotropicus FD987 [QXNK]
27641
27549
-
Ser
GCT
[ENA]
¡û
>W1911775800
QXNL01000046
Gammaproteobacteria
Rodentibacter pneumotropicus Ppn271 [QXNL]
7388
7480
+
Ser
GCT
[ENA]
¡û
>W1911775828
QXNM01000031
Gammaproteobacteria
Rodentibacter pneumotropicus Ppn95 [QXNM]
20415
20323
-
Ser
GCT
[ENA]
¡û
>W1810273781
PSQH01000002
Gammaproteobacteria
Pasteurella multocida S298D [PSQH]
107876
107784
-
Ser
GCT
[ENA]
¡û
>W1810273830
PSQI01000010
Gammaproteobacteria
Pasteurella multocida PY81579 [PSQI]
79
171
+
Ser
GCT
[ENA]
¡û
>W1810698000
QLYS01000002
Gammaproteobacteria
Pasteurella multocida BAUTB2 [QLYS]
96613
96521
-
Ser
GCT
[ENA]
¡û
>C151006656
CP004391
Gammaproteobacteria
Pasteurella multocida subsp. multocida OH4807 [CP004391]
1367149
1367057
-
Ser
GCT
[Ensembl]
¡û
>C151006703
CP004392
Gammaproteobacteria
Pasteurella multocida OH1905 [CP004392]
1911062
1911154
+
Ser
GCT
[Ensembl]
¡û
>C151039971
CP008918
Gammaproteobacteria
Pasteurella multocida ATCC 43137 [CP008918]
913355
913447
+
Ser
GCT
[Ensembl]
¡û
>W10107726
ACZR01000001
Gammaproteobacteria
Pasteurella dagmatis ATCC 43325 [ACZR]
152719
152811
+
Ser
GCT
[ENA]
¡û
>W1510019900
BBXJ01000001
Gammaproteobacteria
Rodentibacter heylii ATCC 12555 [BBXJ]
2362334
2362242
-
Ser
GCT
[ENA]
¡û
>W11110113
ACZR01000001
Gammaproteobacteria
Pasteurella dagmatis ATCC 43325 [ACZR]
152719
152811
+
Ser
GCT
[ENA]
¡û
>W1511300814
JPHI01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida Karachi [JPHI]
164561
164469
-
Ser
GCT
[ENA]
¡û
>W1511320166
JQAB01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida Islm [JQAB]
164561
164469
-
Ser
GCT
[ENA]
¡û
>W1511320217
JQAC01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida Pesh [JQAC]
164561
164469
-
Ser
GCT
[ENA]
¡û
>W1511320268
JQAD01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida PVAcc [JQAD]
164561
164469
-
Ser
GCT
[ENA]
¡û
>W1511320319
JQAE01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida THA [JQAE]
164667
164575
-
Ser
GCT
[ENA]
¡û
>W1511320370
JQAF01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida THD [JQAF]
164667
164575
-
Ser
GCT
[ENA]
¡û
>W1511320422
JQAG01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida THF [JQAG]
164667
164575
-
Ser
GCT
[ENA]
¡û
>W1511320477
JQAH01000009
Gammaproteobacteria
Pasteurella multocida subsp. multocida TX1 [JQAH]
96591
96499
-
Ser
GCT
[ENA]
¡û
>W1511320524
JQAI01000008
Gammaproteobacteria
Pasteurella multocida subsp. multocida V1 [JQAI]
164561
164469
-
Ser
GCT
[ENA]
¡û
>W1511320706
JQAO01000009
Gammaproteobacteria
Pasteurella multocida subsp. multocida BUKK [JQAO]
96591
96499
-
Ser
GCT
[ENA]
¡û
>W1511322777
JQEA01000012
Gammaproteobacteria
Pasteurella multocida subsp. multocida ATTK [JQEA]
164275
164183
-
Ser
GCT
[ENA]
¡û
>W1511322824
JQEB01000010
Gammaproteobacteria
Pasteurella multocida subsp. multocida Faisal [JQEB]
164546
164454
-
Ser
GCT
[ENA]
¡û
>W1511461095
JVME01000004
Gammaproteobacteria
Pasteurella multocida 306_PMUL [JVME]
212
120
-
Ser
GCT
[ENA]
¡û
>W11172198
AFRR01000111
Gammaproteobacteria
Pasteurella multocida subsp. gallicida str. Anand1_poultry [AFRR]
37835
37743
-
Ser
GCT
[ENA]
¡û
>W11172242
AFRS01000063
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. Anand1_goat [AFRS]
37850
37758
-
Ser
GCT
[ENA]
¡û
>C121001462
CP001409
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. 3480 [CP001409]
155165
155257
+
Ser
GCT
[Ensembl]
¡û
>C121004061
CP003022
Gammaproteobacteria
Pasteurella multocida 36950 [CP003022]
102236
102328
+
Ser
GCT
[Ensembl]
¡û
>C121010682
CP003313
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. HN06 [CP003313]
155430
155522
+
Ser
GCT
[Ensembl]
¡û
>C161004525
CP006976
Gammaproteobacteria
Pasteurella multocida subsp. multocida HB01 [CP006976]
150469
150561
+
Ser
GCT
-
¡û
>C161005366
CP007205
Gammaproteobacteria
Pasteurella multocida subsp. multocida PMTB2.1 [CP007205]
104263
104355
+
Ser
GCT
-
¡û
>W121105934
ALBX01001156
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. Anand1_buffalo [ALBX]
190
98
-
Ser
GCT
[ENA]
¡û
>W121105967
ALBY01001691
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. Anand1_cattle [ALBY]
301
209
-
Ser
GCT
[ENA]
¡û
>W121106006
ALBZ01000077
Gammaproteobacteria
Pasteurella multocida subsp. multocida str. P52VAC [ALBZ]
37846
37754
-
Ser
GCT
[ENA]
¡û
>W1610575300
JZXO01000008
Gammaproteobacteria
Pasteurella multocida [JZXO]
1516275
1516367
+
Ser
GCT
[ENA]
¡û
>W1610751523
LNCO01000017
Gammaproteobacteria
Pasteurella multocida [LNCO]
31345
31437
+
Ser
GCT
[ENA]
¡û
>W1610783701
LODS01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LODS]
187134
187226
+
Ser
GCT
[ENA]
¡û
>W1610928476
LUCX01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCX]
171447
171355
-
Ser
GCT
[ENA]
¡û
>W1610928529
LUCY01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCY]
171318
171226
-
Ser
GCT
[ENA]
¡û
>W1610928580
LUCZ01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUCZ]
171447
171355
-
Ser
GCT
[ENA]
¡û
>W1610928624
LUDA01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDA]
188217
188309
+
Ser
GCT
[ENA]
¡û
>W1610928684
LUDB01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDB]
164643
164551
-
Ser
GCT
[ENA]
¡û
>W1610928738
LUDC01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDC]
175189
175097
-
Ser
GCT
[ENA]
¡û
>W1610928777
LUDD01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDD]
189182
189274
+
Ser
GCT
[ENA]
¡û
>W1610928843
LUDE01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDE]
171314
171222
-
Ser
GCT
[ENA]
¡û
>W1610928880
LUDF01000003
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LUDF]
175124
175032
-
Ser
GCT
[ENA]
¡û
>W1611017116
LYOX01000046
Gammaproteobacteria
Pasteurella multocida subsp. septica [LYOX]
68365
68457
+
Ser
GCT
[ENA]
¡û
>W1710545467
FOBN01000002
Gammaproteobacteria
Pasteurella skyensis [FOBN]
83233
83141
-
Ser
GCT
[ENA]
¡û
>W1710572274
FOWO01000002
Gammaproteobacteria
Pasteurella multocida [FOWO]
171513
171421
-
Ser
GCT
[ENA]
¡û
>W1710693368
JZXO01000008
Gammaproteobacteria
Pasteurella multocida [JZXO]
1516275
1516367
+
Ser
GCT
[ENA]
¡û
>W133003627
ARNY01000080
Gammaproteobacteria
Pasteurella multocida P1933 [ARNY]
10257
10346
+
Pseudo
GCT
[ENA]
¡û
>W1710741803
LGRE01000006
Gammaproteobacteria
Pasteurella multocida subsp. multocida [LGRE]
69629
69537
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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