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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.871150 (195 seq.)
>W1710867797
LMIO01000004
Actinomycetota
Leifsonia sp. Root227 [LMIO]
534397
534326
-
Gly
CCC
[ENA]
¡û
>W1710869867
LMKB01000001
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
796004
796075
+
Gly
CCC
[ENA]
¡û
>W1710871382
LMLG01000006
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
82757
82686
-
Gly
CCC
[ENA]
¡û
>W1710872739
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
2941425
2941496
+
Gly
CCC
[ENA]
¡û
>W1710876165
LMOZ01000003
Actinomycetota
Leifsonia sp. Leaf336 [LMOZ]
810534
810461
-
Gly
CCC
[ENA]
¡û
>W1710876903
LMPQ01000010
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
808749
808820
+
Gly
CCC
[ENA]
¡û
>W1710878120
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
2940691
2940762
+
Gly
CCC
[ENA]
¡û
>W1710921175
LNZG01000023
Actinomycetota
Leifsonia xyli subsp. xyli [LNZG]
69378
69305
-
Gly
CCC
[ENA]
¡û
>W1711018547
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
155423
155350
-
Gly
CCC
[ENA]
¡û
>W1711079612
LSOE01000011
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
50024
50097
+
Gly
CCC
[ENA]
¡û
>W1711357161
MDHB01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHB]
1039527
1039600
+
Gly
CCC
[ENA]
¡û
>W1711357224
MDHC01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHC]
3208582
3208655
+
Gly
CCC
[ENA]
¡û
>W1711357280
MDHD01000372
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHD]
7935
8008
+
Gly
CCC
[ENA]
¡û
>W1711357303
MDHE01000153
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHE]
31964
31891
-
Gly
CCC
[ENA]
¡û
>W1711357370
MDHF01000267
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHF]
28830
28757
-
Gly
CCC
[ENA]
¡û
>W1711357389
MDHG01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHG]
1573220
1573293
+
Gly
CCC
[ENA]
¡û
>W1711357426
MDHH01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHH]
885069
885142
+
Gly
CCC
[ENA]
¡û
>W1711357504
MDHI01000014
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
3823
3750
-
Gly
CCC
[ENA]
¡û
>W1711357506
MDHI01000024
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
447151
447224
+
Gly
CCC
[ENA]
¡û
>W1711357539
MDHJ01000001
Actinomycetota
Clavibacter michiganensis [MDHJ]
3186334
3186407
+
Gly
CCC
[ENA]
¡û
>W1711357597
MDHK01000085
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
8663
8590
-
Gly
CCC
[ENA]
¡û
>W1711357598
MDHK01000088
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
3002
2931
-
Gly
CCC
[ENA]
¡û
>W1711357629
MDHL01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHL]
3257075
3257148
+
Gly
CCC
[ENA]
¡û
>W1711357673
MDHM01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHM]
3205263
3205336
+
Gly
CCC
[ENA]
¡û
>W1711360712
MDJW01000009
Actinomycetota
Clavibacter michiganensis [MDJW]
156268
156195
-
Gly
CCC
[ENA]
¡û
>W1711360768
MDJX01000314
Actinomycetota
Clavibacter michiganensis [MDJX]
27082
27009
-
Gly
CCC
[ENA]
¡û
>W1711360812
MDJY01000060
Actinomycetota
Clavibacter michiganensis [MDJY]
248583
248510
-
Gly
CCC
[ENA]
¡û
>W1711360852
MDJZ01000017
Actinomycetota
Clavibacter michiganensis [MDJZ]
310128
310201
+
Gly
CCC
[ENA]
¡û
>W1711461352
MJGS01000006
Actinomycetota
Frigoribacterium sp. MCBA15_019 [MJGS]
37158
37085
-
Gly
CCC
[ENA]
¡û
>W1711505307
MKVJ01000021
Actinomycetota
Leifsonia sp. 71-9 [MKVJ]
89687
89614
-
Gly
CCC
[ENA]
¡û
>W1711961738
NCSR01000003
Actinomycetota
Leifsonia sp. NCR5 [NCSR]
107108
107179
+
Gly
CCC
[ENA]
¡û
>C006155
AM711867
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NCPPB 382 [AM711867]
3224558
3224631
+
Gly
CCC
[Ensembl]
¡û
>C012827
AE016822
Actinomycetota
Leifsonia xyli subsp. xyli str. CTCB07 [AE016822]
2447451
2447524
+
Gly
CCC
[Ensembl]
¡û
>WENV180016185
FSUF01000022
[FSUF] metagenome; soil
383
312
-
Gly
CCC
[ENA]
¡û
>WENV180018942
FTBD01000096
[FTBD] metagenome; soil
2231
2159
-
Gly
CCC
[ENA]
¡û
>WENV180019354
FTBU01001796
[FTBU] metagenome; soil
796
724
-
Gly
CCC
[ENA]
¡û
>W141146511
AWVQ01000407
Actinomycetota
Leifsonia aquatica ATCC 14665 [AWVQ]
2326
2253
-
Gly
CCC
[ENA]
¡û
>W141188410
AYMR01000011
Actinomycetota
Leifsonia aquatica H1aii [AYMR]
40010
40083
+
Gly
CCC
[ENA]
¡û
>W141212777
AZQZ01000003
Actinomycetota
Clavibacter michiganensis michiganensis LMG 26808 [AZQZ]
142098
142025
-
Gly
CCC
[ENA]
¡û
>C08003559
AM849034
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus ATCC 33113 [AM849034]
3182552
3182625
+
Gly
CCC
[Ensembl]
¡û
>WENV183511990
OMJW01001038
[OMJW] termite gut metagenome; termite gut
1816
1745
-
Gly
CCC
[ENA]
¡û
>C181048891
CP021034
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-3 [CP021034]
3116793
3116866
+
Gly
CCC
-
¡û
>C181048936
CP021038
Actinomycetota
Clavibacter michiganensis subsp. insidiosus ATCC 10253 [CP021038]
3110252
3110325
+
Gly
CCC
-
¡û
>C181143712
CP026923
Actinomycetota
Pontimonas salivibrio CL-TW6 [CP026923]
106453
106526
+
Gly
CCC
-
¡û
>C141007901
CP006734
Actinomycetota
Leifsonia xyli subsp. cynodontis DSM 46306 [CP006734]
2509905
2509978
+
Gly
CCC
[Ensembl]
¡û
>W1910839664
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2121935
2122008
+
Gly
CCC
[ENA]
¡û
>W1910839703
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
1713819
1713892
+
Gly
CCC
[ENA]
¡û
>W1910839776
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
323591
323518
-
Gly
CCC
[ENA]
¡û
>W1910839817
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
1142887
1142814
-
Gly
CCC
[ENA]
¡û
>W1910839860
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
1240397
1240324
-
Gly
CCC
[ENA]
¡û
>W1911748136
QWDZ01000008
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
20435
20362
-
Gly
CCC
[ENA]
¡û
>W1911748174
QWEA01000021
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
1899
1972
+
Gly
CCC
[ENA]
¡û
>W1911748214
QWEB01000013
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
8060
8131
+
Gly
CCC
[ENA]
¡û
>W1911748262
QWEC01000011
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
15670
15597
-
Gly
CCC
[ENA]
¡û
>W1911748308
QWED01000009
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
930
1003
+
Gly
CCC
[ENA]
¡û
>W1911748365
QWEE01000052
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
8173
8100
-
Gly
CCC
[ENA]
¡û
>W1911749562
QWGS01000004
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
15302
15229
-
Gly
CCC
[ENA]
¡û
>W1911749619
QWGT01000023
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
7636
7709
+
Gly
CCC
[ENA]
¡û
>W1911749651
QWGU01000009
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
6577
6650
+
Gly
CCC
[ENA]
¡û
>W1911749699
QWGV01000020
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5836
5764
-
Gly
CCC
[ENA]
¡û
>W1810090129
PGFF01000001
Actinomycetota
Diaminobutyricimonas aerilata DSM 27393 [PGFF]
3405685
3405758
+
Gly
CCC
[ENA]
¡û
>W1810277238
PSTR01000003
Actinomycetota
Clavibacter michiganensis AY1B2 [PSTR]
15424
15352
-
Gly
CCC
[ENA]
¡û
>W1810277295
PSTS01000017
Actinomycetota
Clavibacter michiganensis AY1A6 [PSTS]
5675
5602
-
Gly
CCC
[ENA]
¡û
>W1810277393
PSTV01000001
Actinomycetota
Clavibacter michiganensis Z002 [PSTV]
236040
236113
+
Gly
CCC
[ENA]
¡û
>W1810277483
PSTW01000030
Actinomycetota
Clavibacter michiganensis Z001 [PSTW]
260523
260596
+
Gly
CCC
[ENA]
¡û
>W1810282065
PSXY01000003
Actinomycetota
Clavibacter michiganensis AY1B3 [PSXY]
92836
92909
+
Gly
CCC
[ENA]
¡û
>W1810860772
QTTK01000001
Actinomycetota
Clavibacter sp. 199 [QTTK]
1206840
1206767
-
Gly
CCC
[ENA]
¡û
>SRA1015021
SRR023845.424782
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
250
179
-
Gly
CCC
[SRA]
>C151075651
CP011043
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-1 [CP011043]
3130847
3130920
+
Gly
CCC
[Ensembl]
¡û
>C151095711
CP012573
Actinomycetota
Clavibacter capsici PF008 [CP012573]
2978336
2978409
+
Gly
CCC
-
¡û
>W2010310586
CABWMD010000042
Actinomycetota
Frigoribacterium sp. 9N [CABWMD]
48962
48891
-
Gly
CCC
[ENA]
¡û
>W2010609705
JABMLB010000002
Actinomycetota
Frigoribacterium sp. VKM Ac-2860 [JABMLB]
246755
246684
-
Gly
CCC
[ENA]
¡û
>W2010610826
JABRPK010000002
Actinomycetota
Frigoribacterium sp. VKM Ac-2836 [JABRPK]
42365
42294
-
Gly
CCC
[ENA]
¡û
>W2010676088
JACCHJ010000001
Actinomycetota
Leifsonia naganoensis DSM 15166 [JACCHJ]
2102148
2102075
-
Gly
CCC
[ENA]
¡û
>W2010714092
JACHVP010000004
Actinomycetota
Leifsonia aquatica DSM 20146 [JACHVP]
461806
461879
+
Gly
CCC
[ENA]
¡û
>W2010929784
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2121935
2122008
+
Gly
CCC
[ENA]
¡û
>W2010929823
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
1713819
1713892
+
Gly
CCC
[ENA]
¡û
>W2010929896
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
323591
323518
-
Gly
CCC
[ENA]
¡û
>W2010929937
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
1142887
1142814
-
Gly
CCC
[ENA]
¡û
>W2010929980
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
1240397
1240324
-
Gly
CCC
[ENA]
¡û
>W2011269845
QLML01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP6885 [QLML]
117255
117182
-
Gly
CCC
[ENA]
¡û
>W2011269873
QLMM01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7314 [QLMM]
115281
115208
-
Gly
CCC
[ENA]
¡û
>W2011269928
QLMN01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7315 [QLMN]
117255
117182
-
Gly
CCC
[ENA]
¡û
>W2011269957
QLMO01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7316 [QLMO]
115282
115209
-
Gly
CCC
[ENA]
¡û
>W2011270005
QLMP01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7488 [QLMP]
182490
182563
+
Gly
CCC
[ENA]
¡û
>W2011270058
QLMQ01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7568 [QLMQ]
116773
116700
-
Gly
CCC
[ENA]
¡û
>W2011270105
QLMR01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7589 [QLMR]
117255
117182
-
Gly
CCC
[ENA]
¡û
>W2011270137
QLMS01000013
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ1811 [QLMS]
28039
27966
-
Gly
CCC
[ENA]
¡û
>W2011270178
QLMT01000014
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ5026 [QLMT]
32188
32115
-
Gly
CCC
[ENA]
¡û
>W2011270236
QLMU01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 14456 [QLMU]
180605
180678
+
Gly
CCC
[ENA]
¡û
>W2011270276
QLMV01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1465 [QLMV]
174579
174652
+
Gly
CCC
[ENA]
¡û
>W2011270307
QLMW01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1940 [QLMW]
117448
117375
-
Gly
CCC
[ENA]
¡û
>W2011270353
QLMX01000011
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 10202 [QLMX]
7071
7144
+
Gly
CCC
[ENA]
¡û
>W2011270426
QLMY01000009
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2494 [QLMY]
50974
51047
+
Gly
CCC
[ENA]
¡û
>W2011270446
QLMZ01000013
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2500 [QLMZ]
7069
7142
+
Gly
CCC
[ENA]
¡û
>W2011270495
QLNA01000016
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP5842 [QLNA]
53897
53824
-
Gly
CCC
[ENA]
¡û
>W2011270557
QLNB01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7158 [QLNB]
114812
114739
-
Gly
CCC
[ENA]
¡û
>W2011270585
QLNC01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7311 [QLNC]
180616
180689
+
Gly
CCC
[ENA]
¡û
>W2011270620
QLND01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7312 [QLND]
184224
184297
+
Gly
CCC
[ENA]
¡û
>W2011270659
QLNE01000009
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ARZ28 [QLNE]
24960
24887
-
Gly
CCC
[ENA]
¡û
>W2011279221
QODA01000040
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ2541 [QODA]
16092
16019
-
Gly
CCC
[ENA]
¡û
>W2011316479
QWDZ01000008
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
20435
20362
-
Gly
CCC
[ENA]
¡û
>W2011316517
QWEA01000021
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
1899
1972
+
Gly
CCC
[ENA]
¡û
>W2011316557
QWEB01000013
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
8060
8131
+
Gly
CCC
[ENA]
¡û
>W2011316605
QWEC01000011
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
15670
15597
-
Gly
CCC
[ENA]
¡û
>W2011316651
QWED01000009
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
930
1003
+
Gly
CCC
[ENA]
¡û
>W2011316708
QWEE01000052
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
8173
8100
-
Gly
CCC
[ENA]
¡û
>W2011318807
QWGS01000004
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
15302
15229
-
Gly
CCC
[ENA]
¡û
>W2011318864
QWGT01000023
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
7636
7709
+
Gly
CCC
[ENA]
¡û
>W2011318896
QWGU01000009
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
6577
6650
+
Gly
CCC
[ENA]
¡û
>W2011318944
QWGV01000020
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5836
5764
-
Gly
CCC
[ENA]
¡û
>W2011392689
RCCO01000005
Actinomycetota
Leifsonia sp. M321 24_2 [RCCO]
77990
77917
-
Gly
CCC
[ENA]
¡û
>W2011410826
RDQV01000004
Actinomycetota
Clavibacter michiganensis subsp. insidiosus CFBP 2404 [RDQV]
111531
111458
-
Gly
CCC
[ENA]
¡û
>W2011410872
RDQW01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP 4999 [RDQW]
116013
115940
-
Gly
CCC
[ENA]
¡û
>W2011448546
RKIC01000013
Actinomycetota
Frigoribacterium sp. PhB24 [RKIC]
37430
37359
-
Gly
CCC
[ENA]
¡û
>W2011448581
RKID01000002
Actinomycetota
Frigoribacterium sp. PhB118 [RKID]
258152
258081
-
Gly
CCC
[ENA]
¡û
>W2011539491
SCNU01000043
Actinomycetota
Microbacteriaceae bacterium 3R27F9-B [SCNU]
11418
11489
+
Gly
CCC
[ENA]
¡û
>W2011604784
SJEV01000001
Actinomycetota
Microbacteriaceae bacterium J5903 [SJEV]
1388180
1388109
-
Gly
CCC
[ENA]
¡û
>W2012021771
VFPN01000001
Actinomycetota
Klugiella xanthotipulae DSM 18031 [VFPN]
1129001
1128928
-
Gly
CCC
[ENA]
¡û
>W2012433309
WTCS01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis OP3 [WTCS]
3114667
3114738
+
Gly
CCC
[ENA]
¡û
>W2110068869
BPER01000001
Actinomycetota
Leifsonia sp. LS1 [BPER]
412063
411990
-
Gly
CCC
[ENA]
¡û
>W2110159680
JAATPM010000023
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 1217 [JAATPM]
6986
7059
+
Gly
CCC
[ENA]
¡û
>W2110290388
JACYUB010000001
Actinomycetota
Frigoribacterium sp. CFBP 8751 CFBP8751 [JACYUB]
43973
43900
-
Gly
CCC
[ENA]
¡û
>W2110290684
JACYUH010000006
Actinomycetota
Frigoribacterium sp. CFBP 8759 CFBP8759 [JACYUH]
107687
107758
+
Gly
CCC
[ENA]
¡û
>W2110328873
JADKRO010000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VKM Ac-1790 [JADKRO]
355266
355339
+
Gly
CCC
[ENA]
¡û
>W2110328903
JADKRP010000001
Actinomycetota
Clavibacter michiganensis subsp. phaseoli VKM Ac-2886 [JADKRP]
1904407
1904334
-
Gly
CCC
[ENA]
¡û
>W2110328965
JADKRQ010000002
Actinomycetota
Clavibacter sp. VKM Ac-2542 [JADKRQ]
827927
827854
-
Gly
CCC
[ENA]
¡û
>W2110329007
JADKRR010000002
Actinomycetota
Clavibacter sp. VKM Ac-2872 [JADKRR]
362293
362366
+
Gly
CCC
[ENA]
¡û
>W2110329055
JADKRS010000002
Actinomycetota
Clavibacter sp. VKM Ac-2873 [JADKRS]
173766
173694
-
Gly
CCC
[ENA]
¡û
>W2110329569
JADKSD010000003
Actinomycetota
Frigoribacterium sp. VKM Ac-1396 [JADKSD]
260803
260732
-
Gly
CCC
[ENA]
¡û
>W2110457661
JAFBBI010000001
Actinomycetota
Clavibacter michiganensis PvP097 [JAFBBI]
120091
120018
-
Gly
CCC
[ENA]
¡û
>W2110457680
JAFBBJ010000001
Actinomycetota
Clavibacter michiganensis PvP098 [JAFBBJ]
2133337
2133410
+
Gly
CCC
[ENA]
¡û
>W2110458160
JAFBBU010000001
Actinomycetota
Subtercola frigoramans DSM 13057 [JAFBBU]
3527561
3527488
-
Gly
CCC
[ENA]
¡û
>W2110554395
JAGIOV010000001
Actinomycetota
Clavibacter michiganensis PvP036 [JAGIOV]
351225
351297
+
Gly
CCC
[ENA]
¡û
>W2110599816
JAHEWV010000023
Actinomycetota
Clavibacter michiganensis CFBP 3399 [JAHEWV]
9753
9681
-
Gly
CCC
[ENA]
¡û
>W2110680538
JAIHLP010000002
Actinomycetota
Leifsonia poae BS71 [JAIHLP]
2210388
2210461
+
Gly
CCC
[ENA]
¡û
>C201055739
CP033723
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 61-1 [CP033723]
2990803
2990876
+
Gly
CCC
-
¡û
>C211060402
CP043641
Actinomycetota
Leifsonia shinshuensis INR9 [CP043641]
3243578
3243505
-
Gly
CCC
-
¡û
>C211144352
CP061274
Actinomycetota
Clavibacter sp. DM1 [CP061274]
3016916
3016989
+
Gly
CCC
-
¡û
>C211199448
CP065037
Actinomycetota
Leifsonia sp. ZF2019 [CP065037]
3920867
3920940
+
Gly
CCC
-
¡û
>C211344375
CP076349
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ28 [CP076349]
3130132
3130203
+
Gly
CCC
-
¡û
>C211344419
CP076352
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ143 [CP076352]
3114696
3114767
+
Gly
CCC
-
¡û
>C231046729
CP040786
Actinomycetota
Clavibacter phaseoli LPPA 982 [CP040786]
2869558
2869485
-
Gly
CCC
-
¡û
>C231046769
CP040788
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [CP040788]
2321797
2321870
+
Gly
CCC
-
¡û
>C231046796
CP040792
Actinomycetota
Clavibacter californiensis CFBP 8216 [CP040792]
325476
325549
+
Gly
CCC
-
¡û
>C231046861
CP040795
Actinomycetota
Clavibacter phaseoli CFBP 8217 [CP040795]
2993565
2993492
-
Gly
CCC
-
¡û
>C231046907
CP040797
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis A6096 [CP040797]
2127095
2127022
-
Gly
CCC
-
¡û
>C231064315
CP053437
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A5747* [CP053437]
496264
496191
-
Gly
CCC
-
¡û
>C231065147
CP053860
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A4758 [CP053860]
1279604
1279531
-
Gly
CCC
-
¡û
>C231166293
CP080437
Actinomycetota
Clavibacter michiganensis LMG7333 [CP080437]
2219173
2219246
+
Gly
CCC
-
¡û
>C231180659
CP083439
Actinomycetota
Clavibacter sp. A6099 [CP083439]
3190704
3190777
+
Gly
CCC
-
¡û
>C231203723
CP085106
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM84 [CP085106]
3195604
3195677
+
Gly
CCC
-
¡û
>C231203967
CP085137
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM09 [CP085137]
3195600
3195673
+
Gly
CCC
-
¡û
>C231204011
CP085140
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM39 [CP085140]
3195603
3195676
+
Gly
CCC
-
¡û
>C231226844
CP086345
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CNK-2 [CP086345]
2990791
2990864
+
Gly
CCC
-
¡û
>C231226888
CP086346
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 44 [CP086346]
2997180
2997253
+
Gly
CCC
-
¡û
>C231226932
CP086348
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis SL1 [CP086348]
2989813
2989886
+
Gly
CCC
-
¡û
>C231226976
CP086349
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CIBA [CP086349]
2990901
2990974
+
Gly
CCC
-
¡û
>C231227020
CP086350
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 419B [CP086350]
2997575
2997648
+
Gly
CCC
-
¡û
>C231252401
CP088266
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus K496 [CP088266]
3189931
3190004
+
Gly
CCC
-
¡û
>C231359420
CP095274
Actinomycetota
Clavibacter michiganensis subsp. michiganensis N.P. [CP095274]
3254186
3254259
+
Gly
CCC
-
¡û
>W2110768347
SISU01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 0317 [SISU]
114384
114313
-
Gly
CCC
[ENA]
¡û
>C231601444
CP117773
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM04 [CP117773]
3195590
3195663
+
Gly
CCC
-
¡û
>C231601488
CP117776
Actinomycetota
Clavibacter michiganensis subsp. michiganensis Cmm_21 [CP117776]
3195620
3195693
+
Gly
CCC
-
¡û
>C241040265
CP033721
Actinomycetota
Clavibacter nebraskensis HF4 [CP033721]
2989854
2989927
+
Gly
CCC
-
¡û
>C241040309
CP033722
Actinomycetota
Clavibacter nebraskensis 7580 [CP033722]
2990797
2990870
+
Gly
CCC
-
¡û
>C241040353
CP033724
Actinomycetota
Clavibacter michiganensis subsp. michiganensis UF1 [CP033724]
3195620
3195693
+
Gly
CCC
-
¡û
>C241115383
CP047051
Actinomycetota
Clavibacter michiganensis subsp. michiganensis MSF322 [CP047051]
3206551
3206624
+
Gly
CCC
-
¡û
>C241115428
CP047054
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VL527 [CP047054]
3244053
3244126
+
Gly
CCC
-
¡û
>C241127489
CP048045
Actinomycetota
Clavibacter capsici 1207 [CP048045]
3025716
3025789
+
Gly
CCC
-
¡û
>C241127534
CP048047
Actinomycetota
Clavibacter capsici 1106 [CP048047]
2971391
2971464
+
Gly
CCC
-
¡û
>C241127578
CP048049
Actinomycetota
Clavibacter capsici 1101 [CP048049]
2969594
2969667
+
Gly
CCC
-
¡û
>C241148466
CP051154
Actinomycetota
Leifsonia sp. PS1209 [CP051154]
3779346
3779417
+
Gly
CCC
-
¡û
>W2130018279
JACYNS010000077
Actinomycetota
Frigoribacterium sp. CFBP 13605 CFBP13605 [JACYNS]
3544
3473
-
Gly
CCC
[ENA]
¡û
>W2130029939
JAFEUE010000245
Actinomycetota
Clavibacter zhangzhiyongii DM3 [JAFEUE]
3266
3339
+
Gly
CCC
[ENA]
¡û
>W1511352428
JROD01000002
Actinomycetota
Clavibacter michiganensis CF11 [JROD]
138533
138460
-
Gly
CCC
[ENA]
¡û
>W1511509372
JXQZ01000016
Actinomycetota
Frigoribacterium sp. MEB024 [JXQZ]
20797
20868
+
Gly
CCC
[ENA]
¡û
>W1511570107
LAKL01000027
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis DOAB 397 [LAKL]
127244
127317
+
Gly
CCC
[ENA]
¡û
>C161073111
CP014513
Actinomycetota
Frondihabitans sp. PAMC 28766 [CP014513]
552144
552215
+
Gly
CCC
[Ensembl]
¡û
>C161076854
CP014761
Actinomycetota
Leifsonia xyli SE134 [CP014761]
1960795
1960868
+
Gly
CCC
[Ensembl]
¡û
>C131019542
HE614873
Actinomycetota
Clavibacter nebraskensis NCPPB 2581 type strain: NCPPB 2581 [HE614873]
2989171
2989244
+
Gly
CCC
[Ensembl]
¡û
>W1610620592
LHOZ01000023
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
28293
28364
+
Gly
CCC
[ENA]
¡û
>W1610730143
LMIO01000004
Actinomycetota
Leifsonia sp. Root227 [LMIO]
534397
534326
-
Gly
CCC
[ENA]
¡û
>W1610732213
LMKB01000001
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
796004
796075
+
Gly
CCC
[ENA]
¡û
>W1610733728
LMLG01000006
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
82757
82686
-
Gly
CCC
[ENA]
¡û
>W1610735085
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
2941425
2941496
+
Gly
CCC
[ENA]
¡û
>W1610738511
LMOZ01000003
Actinomycetota
Leifsonia sp. Leaf336 [LMOZ]
810534
810461
-
Gly
CCC
[ENA]
¡û
>W1610739249
LMPQ01000010
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
808749
808820
+
Gly
CCC
[ENA]
¡û
>W1610740466
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
2940691
2940762
+
Gly
CCC
[ENA]
¡û
>W1610867023
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
155423
155350
-
Gly
CCC
[ENA]
¡û
>W1610918522
LSOE01000011
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
50024
50097
+
Gly
CCC
[ENA]
¡û
>W1710540812
FNXD01000016
Actinomycetota
Leifsonia sp. CL154 [FNXD]
81156
81229
+
Gly
CCC
[ENA]
¡û
>W1710568286
FOTM01000016
Actinomycetota
Leifsonia sp. CL147 [FOTM]
4372
4299
-
Gly
CCC
[ENA]
¡û
>W1710604672
FVZG01000002
Actinomycetota
Clavibacter michiganensis [FVZG]
115249
115176
-
Gly
CCC
[ENA]
¡û
>W1710748286
LHOZ01000023
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
28293
28364
+
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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