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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.873449 (184 seq.)
>W1710797139
LJSU01000011
Alphaproteobacteria
Rhodobacteraceae bacterium HLUCCO07 [LJSU]
66855
66782
-
Gly
TCC
[ENA]
¡û
>W1710922264
LOAS01000011
Alphaproteobacteria
Aliiruegeria sabulilitoris [LOAS]
64298
64225
-
Gly
TCC
[ENA]
¡û
>W131223007
AUBS01000007
Alphaproteobacteria
Pseudodonghicola xiamenensis DSM 18339 [AUBS]
80571
80644
+
Gly
TCC
[ENA]
¡û
>w020851
AAVE01000002
Alphaproteobacteria
Dinoroseobacter shibae DFL 12 [AAVE]
49511
49584
+
Gly
TCC
[ENA]
¡û
>WENV181234480
OFEU01000206
[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
55207
55134
-
Gly
TCC
[ENA]
¡û
>C08004172
CP000830
Alphaproteobacteria
Dinoroseobacter shibae DFL 12 = DSM 16493 [CP000830]
862900
862973
+
Gly
TCC
[Ensembl]
¡û
>WENV183512516
OMKS01000630
[OMKS] sediment metagenome; hot spring sediment
7609
7536
-
Gly
TCC
[ENA]
¡û
>WENV170738260
LULO01036445
[LULO] marine metagenome; Red Sea water column Station 149 - depth 50m
569
496
-
Gly
TCC
[ENA]
¡û
>WENV170742394
LULU01016457
[LULU] marine metagenome; Red Sea water column Station 108 - depth 50m
684
611
-
Gly
TCC
[ENA]
¡û
>WENV170759139
LUMS01003789
[LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m
1566
1493
-
Gly
TCC
[ENA]
¡û
>WENV170762301
LUMW01004314
[LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m
1239
1166
-
Gly
TCC
[ENA]
¡û
>C181158391
CP027665
Alphaproteobacteria
Pukyongiella litopenaei SH-1 [CP027665]
1815081
1815008
-
Gly
TCC
-
¡û
>C191083076
CP031946
Alphaproteobacteria
Ruegeria sp. AD91A [CP031946]
202372
202445
+
Gly
TCC
-
¡û
>W141820562
JQMY01000001
Alphaproteobacteria
Oceanicola sp. MCTG156(1a) [JQMY]
2993490
2993417
-
Gly
TCC
[ENA]
¡û
>W1910499837
FXYG01000004
Alphaproteobacteria
Ruegeria arenilitoris CECT 8715 [FXYG]
344935
345008
+
Gly
TCC
[ENA]
¡û
>W1911813299
QZEX01000006
Alphaproteobacteria
Rhodobacteraceae bacterium SM1703 [QZEX]
127228
127301
+
Gly
TCC
[ENA]
¡û
>W1810570023
QEHM01000004
Alphaproteobacteria
Albibacillus kandeliae J95 [QEHM]
22787
22714
-
Gly
TCC
[ENA]
¡û
>W1810692295
QLIW01000006
Alphaproteobacteria
Rhodobacteraceae bacterium AsT-22 [QLIW]
78082
78155
+
Gly
TCC
[ENA]
¡û
>W2010419540
FXYG01000004
Alphaproteobacteria
Ruegeria arenilitoris CECT 8715 [FXYG]
344935
345008
+
Gly
TCC
[ENA]
¡û
>W2011347569
QZEX01000006
Alphaproteobacteria
Rhodobacteraceae bacterium SM1703 [QZEX]
127228
127301
+
Gly
TCC
[ENA]
¡û
>W2011483015
RQXX01000001
Alphaproteobacteria
Tranquillimonas sp. M0103 [RQXX]
787873
787800
-
Gly
TCC
[ENA]
¡û
>W2011617034
SKCI01000001
Alphaproteobacteria
Marimonas sp. GH1-19 [SKCI]
45132
45205
+
Gly
TCC
[ENA]
¡û
>W2011620083
SLVM01000004
Alphaproteobacteria
Rhodovulum steppense DSM 21153 [SLVM]
122242
122315
+
Gly
TCC
[ENA]
¡û
>W2011622417
SLWW01000015
Alphaproteobacteria
Rhodovulum euryhalinum DSM 4868 [SLWW]
50673
50746
+
Gly
TCC
[ENA]
¡û
>W2011623171
SLXL01000014
Alphaproteobacteria
Rhodovulum adriaticum DSM 2781 [SLXL]
45659
45732
+
Gly
TCC
[ENA]
¡û
>W2011623339
SLXP01000005
Alphaproteobacteria
Rhodovulum marinum DSM 18063 [SLXP]
14711
14638
-
Gly
TCC
[ENA]
¡û
>W2011623756
SLXU01000011
Alphaproteobacteria
Rhodovulum bhavnagarense DSM 24766 [SLXU]
26694
26621
-
Gly
TCC
[ENA]
¡û
>W2011633422
SMFP01000035
Alphaproteobacteria
Sulfitobacter sp. S4J41 [SMFP]
758
685
-
Gly
TCC
[ENA]
¡û
>W2011638065
SMMF01000949
Alphaproteobacteria
Roseibium sp. RKSG952 [SMMF]
78867
78794
-
Gly
TCC
[ENA]
¡û
>W2012039950
VINQ01000005
Alphaproteobacteria
Aquicoccus porphyridii L1 8-17 [VINQ]
204188
204115
-
Gly
TCC
[ENA]
¡û
>W2012098714
VNKR01000088
Alphaproteobacteria
Pseudoruegeria sp. M32A2M [VNKR]
561093
561020
-
Gly
TCC
[ENA]
¡û
>W2012106100
VOPH01000003
Alphaproteobacteria
Pseudooceanicola sp. CAU 1508 [VOPH]
470211
470284
+
Gly
TCC
[ENA]
¡û
>W2012352579
WJPO01000006
Alphaproteobacteria
Rhodovulum strictum DSM 11289 [WJPO]
138606
138533
-
Gly
TCC
[ENA]
¡û
>W2012413218
WPYR01000008
Alphaproteobacteria
Ruegeria conchae HKCCD9203-2 [WPYR]
66264
66191
-
Gly
TCC
[ENA]
¡û
>W2012413269
WPYS01000012
Alphaproteobacteria
Ruegeria conchae HKCCD9203 [WPYS]
66165
66092
-
Gly
TCC
[ENA]
¡û
>W2012413294
WPYT01000002
Alphaproteobacteria
Ruegeria conchae HKCCD9198 [WPYT]
190882
190955
+
Gly
TCC
[ENA]
¡û
>W2012413442
WPYX01000003
Alphaproteobacteria
Ruegeria sp. HKCCD9179 [WPYX]
318921
318848
-
Gly
TCC
[ENA]
¡û
>W2012413844
WPZM01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCD9190 [WPZM]
948644
948717
+
Gly
TCC
[ENA]
¡û
>W2012413954
WPZP01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD9083 [WPZP]
344625
344698
+
Gly
TCC
[ENA]
¡û
>W2012414009
WPZQ01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCD8929-2 [WPZQ]
295671
295744
+
Gly
TCC
[ENA]
¡û
>W2012414044
WPZR01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD8500 [WPZR]
359000
359073
+
Gly
TCC
[ENA]
¡û
>W2012414120
WPZS01000003
Alphaproteobacteria
Ruegeria arenilitoris HKCCD8343 [WPZS]
268362
268289
-
Gly
TCC
[ENA]
¡û
>W2012414143
WPZT01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD6425 [WPZT]
863882
863809
-
Gly
TCC
[ENA]
¡û
>W2012414179
WPZU01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD6232 [WPZU]
344572
344645
+
Gly
TCC
[ENA]
¡û
>W2012414247
WPZV01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCD6120 [WPZV]
395627
395700
+
Gly
TCC
[ENA]
¡û
>W2012414362
WPZY01000002
Alphaproteobacteria
Ruegeria sp. HKCCD8929 [WPZY]
302175
302248
+
Gly
TCC
[ENA]
¡û
>W2012414457
WQAA01000001
Alphaproteobacteria
Ruegeria conchae HKCCD8727 [WQAA]
268912
268839
-
Gly
TCC
[ENA]
¡û
>W2012414540
WQAC01000001
Alphaproteobacteria
Ruegeria conchae HKCCD7560 [WQAC]
316570
316643
+
Gly
TCC
[ENA]
¡û
>W2012414968
WQAM01000003
Alphaproteobacteria
Ruegeria conchae HKCCD7172 [WQAM]
267154
267081
-
Gly
TCC
[ENA]
¡û
>W2012414996
WQAN01000001
Alphaproteobacteria
Ruegeria conchae HKCCD7171 [WQAN]
803011
802938
-
Gly
TCC
[ENA]
¡û
>W2012415121
WQAP01000007
Alphaproteobacteria
Ruegeria conchae HKCCD6421 [WQAP]
174411
174338
-
Gly
TCC
[ENA]
¡û
>W2012415171
WQAR01000001
Alphaproteobacteria
Ruegeria conchae HKCCD6291 [WQAR]
591675
591748
+
Gly
TCC
[ENA]
¡û
>W2012415235
WQAS01000003
Alphaproteobacteria
Ruegeria conchae HKCCD6251 [WQAS]
267140
267067
-
Gly
TCC
[ENA]
¡û
>W2012415284
WQAT01000003
Alphaproteobacteria
Ruegeria conchae HKCCD6234 [WQAT]
267129
267056
-
Gly
TCC
[ENA]
¡û
>W2012415348
WQAW01000001
Alphaproteobacteria
Ruegeria conchae HKCCD6116 [WQAW]
223143
223216
+
Gly
TCC
[ENA]
¡û
>W2012415417
WQAX01000003
Alphaproteobacteria
Ruegeria conchae HKCCD6115 [WQAX]
267129
267056
-
Gly
TCC
[ENA]
¡û
>W2012415477
WQAY01000008
Alphaproteobacteria
Ruegeria conchae HKCCD4871 [WQAY]
197650
197577
-
Gly
TCC
[ENA]
¡û
>W2012415523
WQAZ01000008
Alphaproteobacteria
Ruegeria conchae HKCCD4811 [WQAZ]
197650
197577
-
Gly
TCC
[ENA]
¡û
>W2012415557
WQBA01000008
Alphaproteobacteria
Ruegeria conchae HKCCD4065 [WQBA]
1187
1260
+
Gly
TCC
[ENA]
¡û
>W2012415592
WQBB01000008
Alphaproteobacteria
Ruegeria conchae HKCCD4061 [WQBB]
1187
1260
+
Gly
TCC
[ENA]
¡û
>W2012415637
WQBC01000008
Alphaproteobacteria
Ruegeria conchae HKCCD4060 [WQBC]
185944
185871
-
Gly
TCC
[ENA]
¡û
>W2012415747
WQBF01000001
Alphaproteobacteria
Ruegeria atlantica HKCCD9122 [WQBF]
22801
22874
+
Gly
TCC
[ENA]
¡û
>W2012415870
WQBH01000009
Alphaproteobacteria
Ruegeria conchae HKCCD9110 [WQBH]
4351
4424
+
Gly
TCC
[ENA]
¡û
>W2012415890
WQBI01000001
Alphaproteobacteria
Ruegeria conchae HKCCD9105 [WQBI]
310070
309997
-
Gly
TCC
[ENA]
¡û
>W2012415976
WQBK01000001
Alphaproteobacteria
Ruegeria conchae HKCCD9079 [WQBK]
296248
296175
-
Gly
TCC
[ENA]
¡û
>W2012416082
WQBM01000002
Alphaproteobacteria
Ruegeria conchae HKCCD8715 [WQBM]
230970
231043
+
Gly
TCC
[ENA]
¡û
>W2012416152
WQBO01000001
Alphaproteobacteria
Ruegeria atlantica HKCCD8344 [WQBO]
22801
22874
+
Gly
TCC
[ENA]
¡û
>W2012416289
WQBR01000001
Alphaproteobacteria
Ruegeria conchae HKCCD7314 [WQBR]
202261
202334
+
Gly
TCC
[ENA]
¡û
>W2012416691
WQBY01000004
Alphaproteobacteria
Ruegeria conchae HKCCD6461 [WQBY]
174897
174970
+
Gly
TCC
[ENA]
¡û
>W2012416829
WQCC01000006
Alphaproteobacteria
Ruegeria conchae HKCCD6401 [WQCC]
3939
4012
+
Gly
TCC
[ENA]
¡û
>W2012417439
WQCS01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD6598-2 [WQCS]
866634
866561
-
Gly
TCC
[ENA]
¡û
>W2012417475
WQCT01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCD6598 [WQCT]
344485
344558
+
Gly
TCC
[ENA]
¡û
>W2012417547
WQCU01000003
Alphaproteobacteria
Ruegeria conchae HKCCD7109 [WQCU]
267154
267081
-
Gly
TCC
[ENA]
¡û
>W2012417707
WQCZ01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0519 [WQCZ]
280342
280269
-
Gly
TCC
[ENA]
¡û
>W2012417746
WQDA01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0515 [WQDA]
992634
992707
+
Gly
TCC
[ENA]
¡û
>W2012417788
WQDB01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0510 [WQDB]
344706
344779
+
Gly
TCC
[ENA]
¡û
>W2012417832
WQDC01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0240 [WQDC]
344570
344643
+
Gly
TCC
[ENA]
¡û
>W2012417898
WQDD01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0154 [WQDD]
344475
344548
+
Gly
TCC
[ENA]
¡û
>W2012417924
WQDE01000001
Alphaproteobacteria
Ruegeria conchae HKCCA0806 [WQDE]
270832
270759
-
Gly
TCC
[ENA]
¡û
>W2012418162
WQDJ01000002
Alphaproteobacteria
Ruegeria conchae HKCCA0209 [WQDJ]
7112
7185
+
Gly
TCC
[ENA]
¡û
>W2012418284
WQDM01000001
Alphaproteobacteria
Ruegeria sp. HKCCA4008 [WQDM]
38852
38925
+
Gly
TCC
[ENA]
¡û
>W2012418349
WQDN01000003
Alphaproteobacteria
Ruegeria conchae HKCCA0503 [WQDN]
217485
217412
-
Gly
TCC
[ENA]
¡û
>W2012418382
WQDO01000004
Alphaproteobacteria
Ruegeria conchae HKCCA0310 [WQDO]
19434
19507
+
Gly
TCC
[ENA]
¡û
>W2012418479
WQDQ01000003
Alphaproteobacteria
Ruegeria sp. HKCCA0235A [WQDQ]
39287
39360
+
Gly
TCC
[ENA]
¡û
>W2012418585
WQDS01000013
Alphaproteobacteria
Ruegeria conchae HKCCA0208 [WQDS]
140641
140714
+
Gly
TCC
[ENA]
¡û
>W2012418619
WQDT01000004
Alphaproteobacteria
Ruegeria conchae HKCCA0065 [WQDT]
195149
195222
+
Gly
TCC
[ENA]
¡û
>W2012419019
WQEC01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA6437 [WQEC]
344564
344637
+
Gly
TCC
[ENA]
¡û
>W2012419041
WQED01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0501 [WQED]
344508
344581
+
Gly
TCC
[ENA]
¡û
>W2012419114
WQEE01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA0037 [WQEE]
304473
304400
-
Gly
TCC
[ENA]
¡û
>W2012419253
WQEH01000005
Alphaproteobacteria
Ruegeria conchae HKCCA6604 [WQEH]
204622
204549
-
Gly
TCC
[ENA]
¡û
>W2012419300
WQEI01000005
Alphaproteobacteria
Ruegeria conchae HKCCA6601 [WQEI]
204622
204549
-
Gly
TCC
[ENA]
¡û
>W2012419312
WQEJ01000002
Alphaproteobacteria
Ruegeria conchae HKCCA6533 [WQEJ]
52796
52869
+
Gly
TCC
[ENA]
¡û
>W2012419567
WQEO01000016
Alphaproteobacteria
Ruegeria conchae HKCCA6158 [WQEO]
6834
6907
+
Gly
TCC
[ENA]
¡û
>W2012419573
WQEP01000001
Alphaproteobacteria
Ruegeria sp. HKCCA0370 [WQEP]
32400
32473
+
Gly
TCC
[ENA]
¡û
>W2012419907
WQEW01000003
Alphaproteobacteria
Ruegeria conchae HKCCC1047 [WQEW]
187390
187463
+
Gly
TCC
[ENA]
¡û
>W2012420084
WQFA01000004
Alphaproteobacteria
Ruegeria conchae HKCCA5917 [WQFA]
61356
61429
+
Gly
TCC
[ENA]
¡û
>W2012420127
WQFB01000002
Alphaproteobacteria
Ruegeria conchae HKCCA5916 [WQFB]
282936
282863
-
Gly
TCC
[ENA]
¡û
>W2012420177
WQFC01000007
Alphaproteobacteria
Ruegeria conchae HKCCA5816 [WQFC]
155851
155924
+
Gly
TCC
[ENA]
¡û
>W2012420356
WQFG01000007
Alphaproteobacteria
Ruegeria conchae HKCCA5689 [WQFG]
17815
17888
+
Gly
TCC
[ENA]
¡û
>W2012420405
WQFH01000007
Alphaproteobacteria
Ruegeria conchae HKCCA5681 [WQFH]
17815
17888
+
Gly
TCC
[ENA]
¡û
>W2012420556
WQFL01000001
Alphaproteobacteria
Ruegeria sp. HKCCA5463 [WQFL]
22765
22838
+
Gly
TCC
[ENA]
¡û
>W2012420780
WQFQ01000001
Alphaproteobacteria
Ruegeria sp. HKCCA4812 [WQFQ]
22796
22869
+
Gly
TCC
[ENA]
¡û
>W2012420845
WQFR01000002
Alphaproteobacteria
Ruegeria conchae HKCCA4785 [WQFR]
216663
216590
-
Gly
TCC
[ENA]
¡û
>W2012420891
WQFS01000006
Alphaproteobacteria
Ruegeria conchae HKCCA4749 [WQFS]
70348
70275
-
Gly
TCC
[ENA]
¡û
>W2012420934
WQFT01000002
Alphaproteobacteria
Ruegeria conchae HKCCA4748 [WQFT]
174861
174934
+
Gly
TCC
[ENA]
¡û
>W2012420979
WQFU01000003
Alphaproteobacteria
Ruegeria conchae HKCCA4742 [WQFU]
61356
61429
+
Gly
TCC
[ENA]
¡û
>W2012421027
WQFV01000003
Alphaproteobacteria
Ruegeria conchae HKCCA4717 [WQFV]
234816
234743
-
Gly
TCC
[ENA]
¡û
>W2012421124
WQFX01000008
Alphaproteobacteria
Ruegeria conchae HKCCA4710 [WQFX]
56584
56511
-
Gly
TCC
[ENA]
¡û
>W2012421173
WQFY01000008
Alphaproteobacteria
Ruegeria conchae HKCCA4709 [WQFY]
56584
56511
-
Gly
TCC
[ENA]
¡û
>W2012421258
WQGA01000004
Alphaproteobacteria
Ruegeria sp. HKCCC2117 [WQGA]
273934
273861
-
Gly
TCC
[ENA]
¡û
>W2012421313
WQGB01000004
Alphaproteobacteria
Ruegeria sp. HKCCC2112 [WQGB]
275459
275386
-
Gly
TCC
[ENA]
¡û
>W2012421356
WQGC01000005
Alphaproteobacteria
Ruegeria sp. HKCCC2111 [WQGC]
319226
319153
-
Gly
TCC
[ENA]
¡û
>W2012421391
WQGD01000006
Alphaproteobacteria
Ruegeria sp. HKCCA6837 [WQGD]
17753
17826
+
Gly
TCC
[ENA]
¡û
>W2012421438
WQGE01000004
Alphaproteobacteria
Ruegeria sp. HKCCA5929 [WQGE]
336021
335948
-
Gly
TCC
[ENA]
¡û
>W2012421455
WQGF01000001
Alphaproteobacteria
Ruegeria sp. HKCCA5763 [WQGF]
115811
115884
+
Gly
TCC
[ENA]
¡û
>W2012421647
WQGJ01000001
Alphaproteobacteria
Ruegeria sp. HKCCA4633 [WQGJ]
991465
991392
-
Gly
TCC
[ENA]
¡û
>W2012422528
WQHD01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA6764 [WQHD]
1488777
1488704
-
Gly
TCC
[ENA]
¡û
>W2012422604
WQHF01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5932 [WQHF]
344485
344558
+
Gly
TCC
[ENA]
¡û
>W2012422648
WQHG01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5930 [WQHG]
474588
474661
+
Gly
TCC
[ENA]
¡û
>W2012422711
WQHH01000003
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5923 [WQHH]
344736
344809
+
Gly
TCC
[ENA]
¡û
>W2012422761
WQHI01000003
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5915 [WQHI]
344485
344558
+
Gly
TCC
[ENA]
¡û
>W2012422801
WQHJ01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5725 [WQHJ]
344447
344520
+
Gly
TCC
[ENA]
¡û
>W2012422843
WQHK01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5708 [WQHK]
2169689
2169616
-
Gly
TCC
[ENA]
¡û
>W2012422890
WQHL01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5546 [WQHL]
344752
344825
+
Gly
TCC
[ENA]
¡û
>W2012422912
WQHM01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5403 [WQHM]
345624
345697
+
Gly
TCC
[ENA]
¡û
>W2012422982
WQHN01000002
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5369 [WQHN]
268601
268528
-
Gly
TCC
[ENA]
¡û
>W2012423008
WQHO01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5275 [WQHO]
633229
633156
-
Gly
TCC
[ENA]
¡û
>W2012423112
WQHQ01000003
Alphaproteobacteria
Ruegeria arenilitoris HKCCA4775 [WQHQ]
354159
354232
+
Gly
TCC
[ENA]
¡û
>W2012423136
WQHR01000001
Alphaproteobacteria
Ruegeria arenilitoris HKCCA4685 [WQHR]
466338
466411
+
Gly
TCC
[ENA]
¡û
>W2012423293
WQHU01000009
Alphaproteobacteria
Ruegeria arenilitoris HKCCC1288 [WQHU]
160353
160426
+
Gly
TCC
[ENA]
¡û
>W2012423431
WQHX01000004
Alphaproteobacteria
Ruegeria arenilitoris HKCCC1153 [WQHX]
168353
168426
+
Gly
TCC
[ENA]
¡û
>W2012423618
WQIB01000006
Alphaproteobacteria
Ruegeria conchae HKCCA6196 [WQIB]
30673
30746
+
Gly
TCC
[ENA]
¡û
>W2012423869
WQIH01000009
Alphaproteobacteria
Ruegeria arenilitoris HKCCA5739 [WQIH]
106856
106783
-
Gly
TCC
[ENA]
¡û
>W2012423999
WQIK01000003
Alphaproteobacteria
Ruegeria conchae HKCCA5680 [WQIK]
267135
267062
-
Gly
TCC
[ENA]
¡û
>W2012424500
WQIV01000005
Alphaproteobacteria
Ruegeria conchae HKCCA4776 [WQIV]
289238
289165
-
Gly
TCC
[ENA]
¡û
>W2012424724
WQJA01000004
Alphaproteobacteria
Ruegeria conchae HKCCA1383-2 [WQJA]
267153
267080
-
Gly
TCC
[ENA]
¡û
>W2012467269
WVQU01000001
Alphaproteobacteria
Ruegeria sp. HKCCD7559 [WVQU]
284380
284453
+
Gly
TCC
[ENA]
¡û
>W2012467311
WVQV01000001
Alphaproteobacteria
Ruegeria sp. HKCCD6119 [WVQV]
46672
46745
+
Gly
TCC
[ENA]
¡û
>W2012467374
WVQW01000001
Alphaproteobacteria
Ruegeria sp. HKCCD6604 [WVQW]
1222396
1222323
-
Gly
TCC
[ENA]
¡û
>W2012467433
WVQX01000004
Alphaproteobacteria
Ruegeria sp. HKCCD6428 [WVQX]
366376
366303
-
Gly
TCC
[ENA]
¡û
>W2012467448
WVQY01000001
Alphaproteobacteria
Ruegeria atlantica HKCCD6238 [WVQY]
27596
27669
+
Gly
TCC
[ENA]
¡û
>W2012467518
WVQZ01000007
Alphaproteobacteria
Ruegeria sp. HKCCD6228 [WVQZ]
23290
23363
+
Gly
TCC
[ENA]
¡û
>W2012467559
WVRA01000002
Alphaproteobacteria
Ruegeria atlantica HKCCD6181 [WVRA]
402242
402315
+
Gly
TCC
[ENA]
¡û
>W2012467586
WVRB01000001
Alphaproteobacteria
Ruegeria sp. HKCCD6157 [WVRB]
652843
652916
+
Gly
TCC
[ENA]
¡û
>W2012467650
WVRC01000005
Alphaproteobacteria
Ruegeria sp. HKCCD7319 [WVRC]
257406
257333
-
Gly
TCC
[ENA]
¡û
>W2012467703
WVRD01000006
Alphaproteobacteria
Ruegeria sp. HKCCD7318 [WVRD]
256873
256800
-
Gly
TCC
[ENA]
¡û
>W2012467741
WVRE01000004
Alphaproteobacteria
Ruegeria sp. HKCCD7303 [WVRE]
81752
81825
+
Gly
TCC
[ENA]
¡û
>W2012467783
WVRF01000005
Alphaproteobacteria
Ruegeria sp. HKCCD7296 [WVRF]
24029
24102
+
Gly
TCC
[ENA]
¡û
>W2012467815
WVRG01000001
Alphaproteobacteria
Ruegeria sp. HKCCD6109 [WVRG]
336072
335999
-
Gly
TCC
[ENA]
¡û
>W2012467880
WVRH01000004
Alphaproteobacteria
Ruegeria sp. HKCCD5851 [WVRH]
42324
42397
+
Gly
TCC
[ENA]
¡û
>W2012467928
WVRI01000005
Alphaproteobacteria
Ruegeria sp. HKCCD5849 [WVRI]
47168
47241
+
Gly
TCC
[ENA]
¡û
>W2012467964
WVRJ01000003
Alphaproteobacteria
Ruegeria sp. HKCCD4884 [WVRJ]
282255
282182
-
Gly
TCC
[ENA]
¡û
>W2012467989
WVRK01000001
Alphaproteobacteria
Ruegeria sp. HKCCD4332 [WVRK]
68388
68461
+
Gly
TCC
[ENA]
¡û
>W2012468036
WVRL01000001
Alphaproteobacteria
Ruegeria sp. HKCCD4318-2 [WVRL]
68386
68459
+
Gly
TCC
[ENA]
¡û
>W2012468113
WVRM01000003
Alphaproteobacteria
Ruegeria sp. HKCCD4318 [WVRM]
160476
160403
-
Gly
TCC
[ENA]
¡û
>W2012468160
WVRN01000001
Alphaproteobacteria
Ruegeria sp. HKCCD4315 [WVRN]
2450590
2450517
-
Gly
TCC
[ENA]
¡û
>ENV09001808
ACQI01009243
Hydrothermal vent metagenome LCHCB.C1
420
493
+
Gly
TCC
[ENA]
¡û
>W2110406433
JAEDOR010000003
Alphaproteobacteria
Ruegeria sp. HKCCE4150 [JAEDOR]
298517
298444
-
Gly
TCC
[ENA]
¡û
>W2110406475
JAEDOS010000004
Alphaproteobacteria
Ruegeria sp. HKCCE4148 [JAEDOS]
23108
23181
+
Gly
TCC
[ENA]
¡û
>W2110406507
JAEDOT010000001
Alphaproteobacteria
Ruegeria sp. HKCCSP346 [JAEDOT]
1454697
1454624
-
Gly
TCC
[ENA]
¡û
>W2110406536
JAEDOU010000001
Alphaproteobacteria
Ruegeria sp. HKCCE3926 [JAEDOU]
247598
247671
+
Gly
TCC
[ENA]
¡û
>W2110406604
JAEDOV010000003
Alphaproteobacteria
Ruegeria sp. HKCCSP351 [JAEDOV]
285574
285501
-
Gly
TCC
[ENA]
¡û
>W2110406637
JAEDOW010000001
Alphaproteobacteria
Ruegeria sp. HKCCSP335 [JAEDOW]
1375415
1375342
-
Gly
TCC
[ENA]
¡û
>W2110406682
JAEDOX010000001
Alphaproteobacteria
Ruegeria sp. HKCCSA071 [JAEDOX]
1375626
1375553
-
Gly
TCC
[ENA]
¡û
>W2110547779
JAGHRB010000003
Alphaproteobacteria
Ruegeria sp. R13_0 [JAGHRB]
14847
14774
-
Gly
TCC
[ENA]
¡û
>W2110654494
JAHVJT010000002
Alphaproteobacteria
Ruegeria arenilitoris DP3N14-3 [JAHVJT]
348173
348246
+
Gly
TCC
[ENA]
¡û
>W2110700884
JAIUZJ010000001
Alphaproteobacteria
Ruegeria marisrubri DP4N0-4 [JAIUZJ]
626386
626313
-
Gly
TCC
[ENA]
¡û
>C211204893
CP065359
Alphaproteobacteria
Ruegeria sp. SCSIO 43209 [CP065359]
2134648
2134575
-
Gly
TCC
-
¡û
>C231169413
CP081106
Alphaproteobacteria
Ruegeria sp. B32 [CP081106]
736541
736614
+
Gly
TCC
-
¡û
>W2110753529
NRRP01000016
Alphaproteobacteria
Rhodovulum adriaticum DSM 2781 [NRRP]
20063
19990
-
Gly
TCC
[ENA]
¡û
>C231386189
CP097540
Alphaproteobacteria
Dinoroseobacter shibae DSM 112351 [CP097540]
862900
862973
+
Gly
TCC
-
¡û
>C231386233
CP097547
Alphaproteobacteria
Dinoroseobacter shibae DFL-36 [CP097547]
862900
862973
+
Gly
TCC
-
¡û
>C231452996
CP102409
Alphaproteobacteria
Ruegeria sp. YS9 [CP102409, CP102410, CP102412]
2245417
2245344
-
Gly
TCC
-
¡û
>C241095771
CP045384
Alphaproteobacteria
Ruegeria sp. THAF33 [CP045384]
2393182
2393109
-
Gly
TCC
-
¡û
>W2130002381
BNAP01000008
Alphaproteobacteria
Pseudodonghicola xiamenensis CGMCC 1.7081 [BNAP]
83109
83036
-
Gly
TCC
[ENA]
¡û
>W1511482913
JWLJ01000001
Alphaproteobacteria
Ruegeria sp. ANG-R [JWLJ]
1735795
1735722
-
Gly
TCC
[ENA]
¡û
>W1511482946
JWLK01000001
Alphaproteobacteria
Ruegeria sp. ANG-S4 [JWLK]
811032
811105
+
Gly
TCC
[ENA]
¡û
>W1610661096
LJSU01000011
Alphaproteobacteria
Rhodobacteraceae bacterium HLUCCO07 [LJSU]
66855
66782
-
Gly
TCC
[ENA]
¡û
>W1610779743
LOAS01000011
Alphaproteobacteria
Aliiruegeria sabulilitoris [LOAS]
64298
64225
-
Gly
TCC
[ENA]
¡û
>W1710518971
FNEJ01000014
Alphaproteobacteria
Salipiger marinus marina [FNEJ]
54513
54586
+
Gly
TCC
[ENA]
¡û
>W1710524218
FNIO01000001
Alphaproteobacteria
Lutimaribacter pacificus [FNIO]
1090606
1090533
-
Gly
TCC
[ENA]
¡û
>W1710557745
FOLG01000019
Alphaproteobacteria
Tropicimonas isoalkanivorans [FOLG]
41955
42028
+
Gly
TCC
[ENA]
¡û
>W1710574562
FOYI01000006
Alphaproteobacteria
Poseidonocella sedimentorum [FOYI]
80334
80407
+
Gly
TCC
[ENA]
¡û
>W1710589226
FQZZ01000001
Alphaproteobacteria
Lutimaribacter pacificus [FQZZ]
147563
147636
+
Gly
TCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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