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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.87433 (4 seq.)
>W2011366005
RAYU01000024
Unclassified
bacterium 1XD42-8 [RAYU]
5922
5835
-
Ser
CGA
[ENA]
¡û
>W2011366880
RAZJ01000020
Unclassified
bacterium 1XD42-1 [RAZJ]
5944
5857
-
Ser
CGA
[ENA]
¡û
>W2110125571
CAJTDM010000015
Bacillota
Oscillospiraceae bacterium [CAJTDM]
48682
48769
+
Ser
CGA
[ENA]
¡û
>W2110126252
CAJTEJ010000017
Bacillota
Oscillospiraceae bacterium [CAJTEJ]
54085
54172
+
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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