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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.90409 (8 seq.)
>W131219808
ATYW01000001
Actinomycetota
Glycomyces tenuis DSM 44171 [ATYW]
307165
307248
+
Leu
CAG
[ENA]
¡û
>W141169669
AXWO01000020
Actinomycetota
Glycomyces arizonensis DSM 44726 [AXWO]
52932
53015
+
Leu
CAG
[ENA]
¡û
>W141216148
AZUQ01000001
Actinomycetota
Haloglycomyces albus DSM 45210 [AZUQ]
1027936
1027853
-
Leu
CAG
[ENA]
¡û
>W141758608
JNYS01000394
Actinomycetota
Glycomyces tenuis [JNYS]
3373
3290
-
Leu
CAG
[ENA]
¡û
>W141770745
JOGR01000014
Actinomycetota
Glycomyces sp. NRRL B-16210 [JOGR]
149450
149533
+
Leu
CAG
[ENA]
¡û
>W1810091090
PGGV01000016
Actinomycetota
Glycomyces xiaoerkulensis TRM 41368 [PGGV]
255926
255842
-
Leu
CAG
[ENA]
¡û
>W2110427421
JAELXW010000017
Actinomycetota
Glycomyces salinus YIM 93776 [JAELXW]
49632
49549
-
Leu
CAG
[ENA]
¡û
>W2110553527
JAGIOB010000001
Actinomycetota
Microlunatus capsulatus DSM 12936 [JAGIOB]
2522219
2522302
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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