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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.91808 (14 seq.)
>W1910704587
MFCO01000002
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_38_8b [MFCO]
669
586
-
Leu
TAG
[ENA]
¡û
>W1910704872
MFCY01000014
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_41 [MFCY]
4443
4360
-
Leu
TAG
[ENA]
¡û
>W1910705112
MFDG01000038
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_38_25 [MFDG]
4848
4765
-
Leu
TAG
[ENA]
¡û
>W1910705230
MFDL01000018
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_38_10 [MFDL]
6228
6145
-
Leu
TAG
[ENA]
¡û
>W1910705515
MFDW01000042
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_38_18 [MFDW]
17790
17873
+
Leu
TAG
[ENA]
¡û
>W1910705662
MFEB01000026
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_12_FULL_38_10 [MFEB]
740
657
-
Leu
TAG
[ENA]
¡û
>W2010838013
MFCO01000002
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_38_8b [MFCO]
669
586
-
Leu
TAG
[ENA]
¡û
>W2010838298
MFCY01000014
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_41 [MFCY]
4443
4360
-
Leu
TAG
[ENA]
¡û
>W2010838538
MFDG01000038
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_38_25 [MFDG]
4848
4765
-
Leu
TAG
[ENA]
¡û
>W2010838656
MFDL01000018
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_38_10 [MFDL]
6228
6145
-
Leu
TAG
[ENA]
¡û
>W2010838941
MFDW01000042
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_38_18 [MFDW]
17790
17873
+
Leu
TAG
[ENA]
¡û
>W2010839088
MFEB01000026
Unclassified
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_12_FULL_38_10 [MFEB]
740
657
-
Leu
TAG
[ENA]
¡û
>W1511601043
LBUJ01000014
Unclassified
Candidatus Daviesbacteria bacterium GW2011_GWA2_38_17 bacterium GW2011_GWA2_38_17 [LBUJ]
3616
3699
+
Leu
TAG
[ENA]
¡û
>W1511601604
LBVC01000071
Unclassified
Candidatus Daviesbacteria bacterium GW2011_GWF2_38_6 bacterium GW2011_GWF2_38_6 [LBVC]
4169
4252
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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