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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.95688 (54 seq.)
>W1710944400
LOQS01000024
Actinomycetota
Corynebacterium glutamicum [LOQS]
63982
64066
+
Leu
TAG
[ENA]
¡û
>W1710944468
LOQT01000033
Actinomycetota
Corynebacterium glutamicum [LOQT]
43495
43579
+
Leu
TAG
[ENA]
¡û
>W1710944493
LOQV01000014
Actinomycetota
Corynebacterium glutamicum [LOQV]
43468
43552
+
Leu
TAG
[ENA]
¡û
>W1710944573
LOQW01000017
Actinomycetota
Corynebacterium glutamicum [LOQW]
43495
43579
+
Leu
TAG
[ENA]
¡û
>W1710944599
LOQX01000005
Actinomycetota
Corynebacterium glutamicum [LOQX]
46890
46974
+
Leu
TAG
[ENA]
¡û
>W1710944692
LOQY01000107
Actinomycetota
Corynebacterium glutamicum [LOQY]
44401
44485
+
Leu
TAG
[ENA]
¡û
>C171074424
CP018175
Actinomycetota
Corynebacterium glutamicum XV [CP018175]
2597257
2597173
-
Leu
TAG
-
¡û
>C171111075
CP020658
Actinomycetota
Corynebacterium glutamicum TQ2223 [CP020658]
113742
113826
+
Leu
TAG
-
¡û
>W131156389
AQPS01000017
Actinomycetota
Corynebacterium glutamicum MT [AQPS]
43372
43456
+
Leu
TAG
[ENA]
¡û
>W131215722
ATVF01000014
Actinomycetota
Corynebacterium callunae DSM 20147 [ATVF]
41318
41402
+
Leu
TAG
[ENA]
¡û
>C005557
BA000035
Actinomycetota
Corynebacterium efficiens YS-314 [BA000035]
2555039
2554958
-
Leu
TAG
[Ensembl]
¡û
>C005697
BA000036
Actinomycetota
Corynebacterium glutamicum ATCC 13032 [BA000036]
2650329
2650245
-
Leu
TAG
[Ensembl]
¡û
>C005757
BX927147
Actinomycetota
Corynebacterium glutamicum [BX927147]
2622002
2621918
-
Leu
TAG
[Ensembl]
¡û
>C005817
AP009044
Actinomycetota
Corynebacterium glutamicum R [AP009044]
2654603
2654519
-
Leu
TAG
[Ensembl]
¡û
>W141026614
AKXP01000029
Actinomycetota
Corynebacterium glutamicum Z188 [AKXP]
655
571
-
Leu
TAG
[ENA]
¡û
>WENV180504573
OCAN01008459
[OCAN] human gut metagenome; faeces
496
578
+
Leu
TAG
[ENA]
¢þ
>C181001624
AP017369
Actinomycetota
Corynebacterium suranareeae N24 [AP017369]
2816024
2815942
-
Leu
TAG
-
¡û
>C181002238
AP017557
Actinomycetota
Corynebacterium glutamicum AJ1511 [AP017557]
2578211
2578129
-
Leu
TAG
-
¡û
>C181029646
CP017995
Actinomycetota
Corynebacterium glutamicum C1 [CP017995]
2200410
2200328
-
Leu
TAG
-
¡û
>C181064190
CP022394
Actinomycetota
Corynebacterium glutamicum WM001 [CP022394]
2130227
2130145
-
Leu
TAG
-
¡û
>C181069985
CP022614
Actinomycetota
Corynebacterium glutamicum ATCC 14067 [CP022614]
2603494
2603412
-
Leu
TAG
-
¡û
>C181118447
CP025533
Actinomycetota
Corynebacterium glutamicum ATCC 13032 [CP025533]
2657551
2657469
-
Leu
TAG
-
¡û
>C181118521
CP025534
Actinomycetota
Corynebacterium glutamicum HA [CP025534]
122087
122005
-
Leu
TAG
-
¡û
>C191209519
LR134377
Actinomycetota
Corynebacterium kutscheri NCTC949 [LR134377]
1273138
1273222
+
Leu
TAG
-
¡û
>C191209706
LR134381
Actinomycetota
Corynebacterium kutscheri NCTC11138 [LR134381]
65161
65245
+
Leu
TAG
-
¡û
>C191210894
LR134407
Actinomycetota
Corynebacterium kutscheri NCTC3655 [LR134407]
2320407
2320491
+
Leu
TAG
-
¡û
>W09127917
ACLI01000101
Actinomycetota
Corynebacterium efficiens YS-314 [ACLI]
9402
9320
-
Leu
TAG
[ENA]
¡û
>W141800897
JPDH01000013
Actinomycetota
Corynebacterium glutamicum crenatum [JPDH]
12567
12651
+
Leu
TAG
[ENA]
¡û
>W1910001254
APJJ01000024
Actinomycetota
Corynebacterium glutamicum ZL-2 [APJJ]
2418
2336
-
Leu
TAG
[ENA]
¡û
>W1910374198
FUIB01000028
Actinomycetota
Corynebacterium glutamicum B Co 03.31 [FUIB]
20351
20269
-
Leu
TAG
[ENA]
¡û
>C141004162
CP005959
Actinomycetota
Corynebacterium glutamicum MB001 [CP005959]
2418542
2418458
-
Leu
TAG
[Ensembl]
¡û
>W1910573021
JOLA01000018
Actinomycetota
Corynebacterium glutamicum 1006 [JOLA]
18465
18383
-
Leu
TAG
[ENA]
¡û
>C151033017
CP007722
Actinomycetota
Corynebacterium glutamicum ATCC 21831 [CP007722]
2529356
2529272
-
Leu
TAG
[Ensembl]
¡û
>C151033077
CP007724
Actinomycetota
Corynebacterium glutamicum AR1 [CP007724]
2498944
2498860
-
Leu
TAG
[Ensembl]
¡û
>C151045695
CP009220
Actinomycetota
Corynebacterium deserti GIMN1.010 [CP009220]
2348812
2348728
-
Leu
TAG
-
¡û
>C151069913
CP010451
Actinomycetota
Corynebacterium glutamicum B253 [CP010451]
2525517
2525433
-
Leu
TAG
[Ensembl]
¡û
>C151079620
CP011309
Actinomycetota
[Brevibacterium] flavum ATCC 15168 [CP011309]
2612278
2612194
-
Leu
TAG
[Ensembl]
¡û
>C151079758
CP011312
Actinomycetota
Corynebacterium kutscheri DSM 20755 [CP011312]
655073
655157
+
Leu
TAG
[Ensembl]
¡û
>W1511500710
JXBH01000029
Actinomycetota
Corynebacterium glutamicum SYPS-062 [JXBH]
17107
17023
-
Leu
TAG
[ENA]
¡û
>W1511524484
JYEG01000024
Actinomycetota
Corynebacterium glutamicum SYPS-062-33a [JYEG]
17117
17033
-
Leu
TAG
[ENA]
¡û
>W11176908
AFYA01000022
Actinomycetota
Corynebacterium glutamicum S9114 [AFYA]
43343
43427
+
Leu
TAG
[ENA]
¡û
>C161003060
CP004046
Actinomycetota
[Brevibacterium] flavum ZL-1 [CP004046]
2615862
2615778
-
Leu
TAG
-
¡û
>C161003119
CP004062
Actinomycetota
Corynebacterium glutamicum ZL-6 [CP004062]
2607364
2607280
-
Leu
TAG
-
¡û
>C161040463
CP012194
Actinomycetota
Corynebacterium glutamicum CP [CP012194]
2622491
2622407
-
Leu
TAG
-
¡û
>C161063672
CP013991
Actinomycetota
Corynebacterium glutamicum USDA-ARS-USMARC-56828 [CP013991]
2601120
2601036
-
Leu
TAG
[Ensembl]
¡û
>C161081148
CP014984
Actinomycetota
Corynebacterium glutamicum YI [CP014984]
2606429
2606345
-
Leu
TAG
-
¡û
>C161089893
CP015622
Actinomycetota
Corynebacterium crudilactis JZ16 [CP015622]
2417375
2417291
-
Leu
TAG
[Ensembl]
¡û
>C161096091
CP016335
Actinomycetota
Corynebacterium glutamicum ATCC 13869 [CP016335]
2578214
2578130
-
Leu
TAG
-
¡û
>W121016253
AGQQ01000015
Actinomycetota
Corynebacterium glutamicum ATCC 14067 [AGQQ]
46876
46960
+
Leu
TAG
[ENA]
¡û
>C131012045
CP004047
Actinomycetota
Corynebacterium glutamicum SCgG1 [CP004047]
2674303
2674219
-
Leu
TAG
[Ensembl]
¡û
>C131012105
CP004048
Actinomycetota
Corynebacterium glutamicum SCgG2 [CP004048]
2674302
2674218
-
Leu
TAG
[Ensembl]
¡û
>C131019770
HE802067
Actinomycetota
Corynebacterium glutamicum K051 ATCC 13032 [HE802067]
2650328
2650244
-
Leu
TAG
[Ensembl]
¡û
>C131013494
CP004354
Actinomycetota
Corynebacterium callunae DSM 20147 [CP004354]
2269803
2269719
-
Leu
TAG
[Ensembl]
¡û
>W1710039884
BAYH01000032
Actinomycetota
Corynebacterium glutamicum [BAYH]
17272
17188
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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