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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.96864 (4 seq.)
>W1711406438
MGFN01000019
Unclassified
Candidatus Woesebacteria bacterium GWC1_42_13 [MGFN]
2954
2871
-
Leu
TAG
[ENA]
¡û
>W1910722637
MGGX01000007
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_42_9 [MGGX]
62790
62873
+
Leu
TAG
[ENA]
¡û
>W2010856064
MGGX01000007
Unclassified
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_42_9 [MGGX]
62790
62873
+
Leu
TAG
[ENA]
¡û
>W1511602286
LBWA01000016
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWA1_39_12 bacterium GW2011_GWA1_39_12 [LBWA]
10451
10368
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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