tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001805)

Anticodon = CCG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.355264 (1 seq.)
>SRA1023580 SRR035084.128970 454 Sequencing (SRP001805) 78 152 + Arg CCG [SRA]
Identical group No.412167 (37 seq.)
>W131217051 ATWJ01000014 Actinomycetota Ornithinimicrobium pekingense DSM 21552 [ATWJ] 120114 120188 + Arg CCG [ENA]
>W131217869 ATXE01000002 Actinomycetota Aestuariimicrobium kwangyangense DSM 21549 [ATXE] 505222 505296 + Arg CCG [ENA]
>W131230901 AUIA01000003 Actinomycetota Propionicicella superfundia DSM 22317 [AUIA] 367734 367808 + Arg CCG [ENA]
>WENV180212480 OBAN01061681 [OBAN] marine metagenome; ENVO 00002150 165 237 + Arg CCG [ENA]
>WENV180284851 OBID01136830 [OBID] metagenome; sludge 233 308 + Arg CCG [ENA]
>WENV180291022 OBIV01000421 [OBIV] soil metagenome; Clay 204 276 + Arg CCG [ENA]
>WENV180363940 OBNZ01027755 [OBNZ] marine metagenome; ENVO:00002010 211 283 + Arg CCG [ENA]
>WENV180393003 OBPP01049655 [OBPP] marine metagenome; ENVO:00002042 237 165 - Arg CCG [ENA]
>WENV180594798 OCPA01010839 [OCPA] marine metagenome; ENVO:00002010 220 292 + Arg CCG [ENA]
>WENV180650243 OCSY01000434 [OCSY] marine metagenome; 30 L Plastic container 642 570 - Arg CCG [ENA]
>WENV180690259 OCZS010001443 [OCZS] soil metagenome; soil 984 910 - Arg CCG [ENA]
>WENV180695778 OCZS013949241 [OCZS] soil metagenome; soil 4 78 + Arg CCG [ENA]
>WENV181189835 OEOF01251703 [OEOF] activated sludge metagenome; Activated Sludge 63 135 + Arg CCG [ENA]
>WENV181193090 OEPS011439629 [OEPS] soil metagenome; soil 46 118 + Arg CCG [ENA]
>WENV181292023 OFHD01021452 [OFHD] soil metagenome; Clay 191 264 + Arg CCG [ENA]
>WENV181311615 OFJB01005676 [OFJB] sludge metagenome; sludge 2045 2119 + Arg CCG [ENA]
>WENV181376665 OFQZ01086888 [OFQZ] wastewater metagenome; Exp Tend NO 0WW 539 465 - Arg CCG [ENA]
>WENV181389659 OFRO01001499 [OFRO] wastewater metagenome; Exp Tend NO 10WW 6387 6313 - Arg CCG [ENA]
>WENV183619493 OOFQ01010100 [OOFQ] marine metagenome; seawater 267 339 + Arg CCG [ENA]
>WENV183704218 PDWI01000095 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 17058 16984 - Arg CCG [ENA]
>WENV183708614 PDWI01018006 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 7889 7817 - Arg CCG [ENA]
>WENV183710192 PDWI01041444 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1886 1813 - Arg CCG [ENA]
>WENV183719623 PDWJ01017268 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 3935 4009 + Arg CCG [ENA]
>WENV183719901 PDWJ01022601 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 3897 3971 + Arg CCG [ENA]
>C181197152 CP031229 Actinomycetota Ornithinimicrobium avium AMA3305 [CP031229] 1842623 1842695 + Arg CCG -
>W1910377730 FUKQ01000032 Actinomycetota Luteococcus japonicus LSP_Lj1 [FUKQ] 185440 185514 + Arg CCG [ENA]
>W1911615585 PPCV01000001 Actinomycetota Propioniciclava flava VG341 [PPCV] 123496 123422 - Arg CCG [ENA]
>W1810861665 QTUA01000001 Actinomycetota Calidifontibacter indicus DSM 22967 [QTUA] 3048667 3048595 - Arg CCG [ENA]
>SRA1024257 SRR035084.284041 454 Sequencing (SRP001805) 237 309 + Arg CCG [SRA]
>C151077126 CP011112 Actinomycetota Luteipulveratus mongoliensis MN07-A0370 [CP011112] 4130491 4130565 + Arg CCG -
>SRA1045682 SRR035093.148167 454 Sequencing (SRP001814) 499 425 - Arg CCG [SRA]
>SRA1047538 SRR035093.571164 454 Sequencing (SRP001814) 259 184 - Arg CCG [SRA]
>W1510061657 CCYM01000003 Actinomycetota Nigerium massiliense SIT7 [CCYM] 116196 116122 - Arg CCG [ENA]
>C11114884 AP012204 Actinomycetota Microlunatus phosphovorus NM-1 [AP012204] 3263790 3263862 + Arg CCG [Ensembl]
>W1610625724 LIBA01000071 Actinomycetota Microbacteriaceae bacterium BACL28 MAG-120531-bin53 [LIBA] 3170 3096 - Arg CCG [ENA]
>W1710550134 FOFA01000003 Actinomycetota Microlunatus flavus flava [FOFA] 84388 84314 - Arg CCG [ENA]
>W1710756851 LIBA01000071 Actinomycetota Microbacteriaceae bacterium BACL28 MAG-120531-bin53 [LIBA] 3170 3096 - Arg CCG [ENA]
Identical group No.424403 (29 seq.)
>W1711386872 MEFY01000001 Actinomycetota Leifsonia sp. SCN 70-46 [MEFY] 222331 222405 + Arg CCG [ENA]
>W1711505530 MKVP01000001 Actinomycetota Micrococcales bacterium 70-64 [MKVP] 222055 222129 + Arg CCG [ENA]
>WENV180102849 OAOZ01032395 [OAOZ] marine metagenome; ENVO:00002010 155 227 + Arg CCG [ENA]
>WENV180399116 OBQG01000210 [OBQG] marine metagenome; ENV:00002010 1360 1432 + Arg CCG [ENA]
>WENV180399486 OBQO01000004 [OBQO] marine metagenome; ENVO:00002010 40206 40134 - Arg CCG [ENA]
>WENV181323542 OFKY01005212 [OFKY] marine metagenome; sea ice 783 711 - Arg CCG [ENA]
>WENV181324516 OFLF01000289 [OFLF] marine metagenome; melt pond 676 748 + Arg CCG [ENA]
>WENV181324891 OFLH01031680 [OFLH] marine metagenome; sea ice 279 351 + Arg CCG [ENA]
>WENV181325041 OFLI01002713 [OFLI] seawater metagenome; seawater 490 562 + Arg CCG [ENA]
>WENV181325634 OFLJ01010057 [OFLJ] seawater metagenome; seawater 267 339 + Arg CCG [ENA]
>WENV181368542 OFQL01019752 [OFQL] freshwater metagenome; Freshwater Lake 155 83 - Arg CCG [ENA]
>WENV181370384 OFQS01007279 [OFQS] freshwater metagenome; Freshwater Lake 883 811 - Arg CCG [ENA]
>WENV181392886 OFRX01013578 [OFRX] seawater metagenome; seawater 719 791 + Arg CCG [ENA]
>WENV183620385 OOFR01046541 [OOFR] marine metagenome; seawater 409 481 + Arg CCG [ENA]
>WENV183620878 OOFT01000002 [OOFT] marine metagenome; sea ice 86729 86801 + Arg CCG [ENA]
>WENV183629248 OOGP01013608 [OOGP] marine metagenome; seawater 303 231 - Arg CCG [ENA]
>WENV170568592 FLMP01053497 [FLMP] seawater metagenome; seawater 738 664 - Arg CCG [ENA]
>WENV170614942 FUWD012844853 [FUWD] metagenome; unknown 16885 16959 + Arg CCG [ENA]
>WENV170949446 MEHZ011419342 [MEHZ] marine metagenome; marine surface water 830 756 - Arg CCG [ENA]
>SRA1023163 SRR035084.24540 454 Sequencing (SRP001805) 242 168 - Arg CCG [SRA]
>SRA1023387 SRR035084.84859 454 Sequencing (SRP001805) 240 166 - Arg CCG [SRA]
>SRA1023814 SRR035084.182308 454 Sequencing (SRP001805) 42 116 + Arg CCG [SRA]
>SRA1024200 SRR035084.271140 454 Sequencing (SRP001805) 236 310 + Arg CCG [SRA]
>SRA1024975 SRR035084.451654 454 Sequencing (SRP001805) 127 201 + Arg CCG [SRA]
>SRA1024984 SRR035084.453237 454 Sequencing (SRP001805) 316 242 - Arg CCG [SRA]
>SRA1053564 SRR035098.438933 454 Sequencing (SRP001819) 172 98 - Arg CCG [SRA]
>SRA1053613 SRR035098.452358 454 Sequencing (SRP001819) 173 99 - Arg CCG [SRA]
>WENV043741 AACY022354666 Marine microbial communities from Global Ocean Sampling (GOS) 537 463 - Arg CCG [ENA]
>W121063465 AJKR01000002 Actinomycetota Candidatus Aquiluna sp. IMCC13023 [AJKR] 469602 469528 - Arg CCG [ENA]
Identical group No.447996 (1 seq.)
>SRA1024514 SRR035084.341643 454 Sequencing (SRP001805) 224 297 + Arg CCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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