tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001805)

Anticodon = CGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.326837 (22 seq.)
>WENV180360620 OBNU01004874 [OBNU] marine metagenome; ENVO:00000021 'freshwater lake 883 810 - Ala CGC [ENA]
>WENV180361961 OBNW01014311 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 226 153 - Ala CGC [ENA]
>WENV180394464 OBPS01007268 [OBPS] marine metagenome; ENVO:00002010 seawater 950 1023 + Ala CGC [ENA]
>WENV180395263 OBPT01005577 [OBPT] marine metagenome; ENVO:00002010 seawater 443 516 + Ala CGC [ENA]
>WENV181325993 OFLJ01063506 [OFLJ] seawater metagenome; seawater 360 287 - Ala CGC [ENA]
>WENV170569853 FLMP01327579 [FLMP] seawater metagenome; seawater 360 285 - Ala CGC [ENA]
>WENV170571390 FLOH01000146 [FLOH] marine metagenome; water 30546 30471 - Ala CGC [ENA]
>WENV170600497 FUWD010129740 [FUWD] metagenome; unknown 134 209 + Ala CGC [ENA]
>WENV170606107 FUWD010610037 [FUWD] metagenome; unknown 153 228 + Ala CGC [ENA]
>WENV170625726 FUWD013204239 [FUWD] metagenome; unknown 1715 1790 + Ala CGC [ENA]
>WENV170626727 FUWD013229117 [FUWD] metagenome; unknown 13457 13382 - Ala CGC [ENA]
>WENV170629410 FUWD013269716 [FUWD] metagenome; unknown 16497 16422 - Ala CGC [ENA]
>WENV170633722 FUWD013401083 [FUWD] metagenome; unknown 26181 26106 - Ala CGC [ENA]
>SRA1024028 SRR035084.233560 454 Sequencing (SRP001805) 480 405 - Ala CGC [SRA]
>SRA1024055 SRR035084.238269 454 Sequencing (SRP001805) 202 277 + Ala CGC [SRA]
>SRA1052014 SRR035098.123907 454 Sequencing (SRP001819) 135 60 - Ala CGC [SRA]
>SRA1052049 SRR035098.130812 454 Sequencing (SRP001819) 362 287 - Ala CGC [SRA]
>SRA1052396 SRR035098.195153 454 Sequencing (SRP001819) 122 197 + Ala CGC [SRA]
>SRA1052802 SRR035098.278327 454 Sequencing (SRP001819) 362 287 - Ala CGC [SRA]
>SRA1053298 SRR035098.377159 454 Sequencing (SRP001819) 232 157 - Ala CGC [SRA]
>W1610625665 LIAY01000008 Actinomycetota Microbacteriaceae bacterium BACL25 MAG-120322-bin65 [LIAY] 17815 17890 + Ala CGC [ENA]
>W1710756792 LIAY01000008 Actinomycetota Microbacteriaceae bacterium BACL25 MAG-120322-bin65 [LIAY] 17815 17890 + Ala CGC [ENA]
Identical group No.343246 (28 seq.)
>W1710874089 LMNH01000006 Actinomycetota Nocardioides sp. Leaf285 [LMNH] 24559 24634 + Ala CGC [ENA]
>W1710874874 LMNY01000002 Actinomycetota Nocardioides sp. Leaf307 [LMNY] 1190464 1190389 - Ala CGC [ENA]
>W131155919 AQOZ01000019 Actinomycetota Nocardioides sp. Iso805N [AQOZ] 130903 130978 + Ala CGC [ENA]
>WENV180098586 MTBK01255882 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 206 281 + Ala CGC [ENA]
>WENV181309633 OFIW01017677 [OFIW] marine metagenome; seawater 286 359 + Ala CGC [ENA]
>W141243081 CAJC01000209 Actinomycetota Tetrasphaera jenkinsii Ben 74 [CAJC] 1657 1730 + Ala CGC [ENA]
>W141277553 JAER01000024 Actinomycetota Nocardioides sp. J54 [JAER] 25003 25080 + Ala CGC [ENA]
>WENV170950521 MEHZ011501554 [MEHZ] marine metagenome; marine surface water 150 223 + Ala CGC [ENA]
>C191186692 CP041091 Actinomycetota Nocardioides sambongensis KUDC 5002 [CP041091] 4133674 4133749 + Ala CGC -
>W141815865 JQJL01000015 Actinomycetota Nocardioides sp. UNC345MFTsu5.1 [JQJL] 321806 321881 + Ala CGC [ENA]
>W1910181516 BJMC01000003 Actinomycetota Pimelobacter simplex NBRC 12069 [BJMC] 39598 39525 - Ala CGC [ENA]
>W1911495838 OBQK01000002 Actinomycetota Ornithinimicrobium cerasi USBA17B2 [OBQK] 353017 352942 - Ala CGC [ENA]
>W1911533118 OKQN01000007 Actinomycetota Janibacter massiliensis Marseille-P4121 [OKQN] 282832 282906 + Ala CGC [ENA]
>W1810364573 PVTI01000027 Actinomycetota Knoellia remsis ATCC BAA-1496 [PVTI] 46856 46930 + Ala CGC [ENA]
>W1810504004 QBKO01000012 Actinomycetota Nocardioides sp. CF167 [QBKO] 28271 28196 - Ala CGC [ENA]
>C151061326 CP009896 Actinomycetota Pimelobacter simplex VKM Ac-2033D [CP009896] 1028743 1028818 + Ala CGC [Ensembl]
>SRA1023718 SRR035084.160050 454 Sequencing (SRP001805) 110 37 - Ala CGC [SRA]
>SRA1024268 SRR035084.288110 454 Sequencing (SRP001805) 84 159 + Ala CGC [SRA]
>SRA1024280 SRR035084.291525 454 Sequencing (SRP001805) 306 233 - Ala CGC [SRA]
>W11155969 AFAQ01001944 Actinomycetota Rhodococcus sp. R04 [AFAQ] 378 453 + Ala CGC [ENA]
>W1610027179 AVPK01000010 Actinomycetota Knoellia subterranea KCTC 19937 [AVPK] 82548 82473 - Ala CGC [ENA]
>W1610049457 BBEZ01000010 Actinomycetota Nocardioides sp. AN3 [BBEZ] 17946 17871 - Ala CGC [ENA]
>W1610736435 LMNH01000006 Actinomycetota Nocardioides sp. Leaf285 [LMNH] 24559 24634 + Ala CGC [ENA]
>W1610737220 LMNY01000002 Actinomycetota Nocardioides sp. Leaf307 [LMNY] 1190464 1190389 - Ala CGC [ENA]
>W1710023344 AVPK01000010 Actinomycetota Knoellia subterranea KCTC 19937 [AVPK] 82548 82473 - Ala CGC [ENA]
>W1710045856 BBEZ01000010 Actinomycetota Nocardioides sp. AN3 [BBEZ] 17946 17871 - Ala CGC [ENA]
>W1710515948 FNCF01000001 Actinomycetota Klenkia brasiliensis [FNCF] 223466 223391 - Ala CGC [ENA]
>W1710524364 FNIR01000005 Actinomycetota Klenkia soli [FNIR] 171030 170955 - Ala CGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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