tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001808)

Anticodon = GCG

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.158754 (6 seq.)
>WENV170620841 FUWD013041031 [FUWD] metagenome; unknown 947 1024 + Arg GCG [ENA]
>WENV170628996 FUWD013258121 [FUWD] metagenome; unknown 2903 2826 - Arg GCG [ENA]
>SRA1018830 SRR035082.354343 454 Sequencing (SRP001803) 217 140 - Arg GCG [SRA]
>SRA1030645 SRR035087.308797 454 Sequencing (SRP001808) 70 147 + Arg GCG [SRA]
>SRA1040071 SRR035091.30673 454 Sequencing (SRP001812) 181 258 + Arg GCG [SRA]
>SRA1044379 SRR035092.270893 454 Sequencing (SRP001813) 85 8 - Arg GCG [SRA]
Identical group No.158759 (1 seq.)
>SRA1030752 SRR035087.325662 454 Sequencing (SRP001808) 242 167 - Arg GCG [SRA]
Identical group No.158763 (1 seq.)
>SRA1030797 SRR035087.332905 454 Sequencing (SRP001808) 317 394 + Arg GCG [SRA]
Identical group No.177894 (7 seq.)
>WENV170602330 FUWD010226790 [FUWD] metagenome; unknown 257 181 - Arg GCG [ENA]
>WENV170622793 FUWD013121141 [FUWD] metagenome; unknown 961 1037 + Arg GCG [ENA]
>WENV170631006 FUWD013334893 [FUWD] metagenome; unknown 961 1037 + Arg GCG [ENA]
>SRA1017166 SRR035082.92167 454 Sequencing (SRP001803) 284 208 - Arg GCG [SRA]
>SRA1019452 SRR035082.459112 454 Sequencing (SRP001803) 334 258 - Arg GCG [SRA]
>SRA1029778 SRR035087.180138 454 Sequencing (SRP001808) 397 321 - Arg GCG [SRA]
>SRA1036604 SRR035089.560196 454 Sequencing (SRP001810) 332 256 - Arg GCG [SRA]
Identical group No.177927 (3 seq.)
>WENV170612005 FUWD012480552 [FUWD] metagenome; unknown 22 96 + Arg GCG [ENA]
>SRA1029860 SRR035087.193351 454 Sequencing (SRP001808) 103 177 + Arg GCG [SRA]
>SRA1036174 SRR035089.462378 454 Sequencing (SRP001810) 29 103 + Arg GCG [SRA]
Identical group No.196083 (19 seq.)
>WENV180066733 MPLY02150971 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 133 57 - Arg GCG [ENA]
>WENV180068951 MPLZ02076231 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 260 336 + Arg GCG [ENA]
>WENV180070479 MPLZ02170068 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 298 222 - Arg GCG [ENA]
>WENV180073871 MPMA02105694 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 247 323 + Arg GCG [ENA]
>WENV180078406 MPMB02103264 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 239 315 + Arg GCG [ENA]
>WENV183795772 PVBE010198814 [PVBE] marine metagenome; water 46 122 + Arg GCG [ENA]
>WENV170016849 BARS01018764 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 752 828 + Arg GCG [ENA]
>WENV170016906 BARS01025374 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 370 294 - Arg GCG [ENA]
>WENV170571858 FLOH01000345 [FLOH] marine metagenome; water 2543 2467 - Arg GCG [ENA]
>WENV170673994 LAZR01038347 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 210 285 + Arg GCG [ENA]
>W1910574735 JQAN02000010 Chloroflexota Dehalogenimonas etheniformans GP [JQAN] 241333 241257 - Arg GCG [ENA]
>W1810569099 QEFQ01000004 Chloroflexota Dehalogenimonas alkenigignens BRE15M [QEFQ] 51908 51832 - Arg GCG [ENA]
>C151081949 CP011392 Chloroflexota Dehalogenimonas sp. WBC-2 [CP011392] 1672110 1672186 + Arg GCG -
>SRA1028776 SRR035087.1048 454 Sequencing (SRP001808) 207 131 - Arg GCG [SRA]
>SRA1029292 SRR035087.104059 454 Sequencing (SRP001808) 213 137 - Arg GCG [SRA]
>W10116191 ADNP01000018 Chloroflexota Dehalogenimonas lykanthroporepellens BL-DC-9 [ADNP] 4697 4773 + Arg GCG [ENA]
>C10105317 CP002084 Chloroflexota Dehalogenimonas lykanthroporepellens BL-DC-9 [CP002084] 1441963 1442039 + Arg GCG [Ensembl]
>W11120860 ADNP01000018 Chloroflexota Dehalogenimonas lykanthroporepellens BL-DC-9 [ADNP] 4697 4773 + Arg GCG [ENA]
>W1710718303 LFDV01000001 Chloroflexota Dehalogenimonas alkenigignens [LFDV] 91550 91474 - Arg GCG [ENA]
Identical group No.196281 (1 seq.)
>SRA1030430 SRR035087.278759 454 Sequencing (SRP001808) 223 299 + Arg GCG [SRA]
Identical group No.196336 (1 seq.)
>SRA1030856 SRR035087.340195 454 Sequencing (SRP001808) 121 195 + Arg GCG [SRA]
Identical group No.196394 (1 seq.)
>SRA1031223 SRR035087.395026 454 Sequencing (SRP001808) 325 401 + Arg GCG [SRA]
Identical group No.285116 (34 seq.)
>W1711396627 MEVP01000050 Unclassified candidate division WWE3 bacterium RIFOXYA1_FULL_41_11 [MEVP] 2388 2313 - Arg GCG [ENA]
>W1711396658 MEVQ01000041 Unclassified candidate division WWE3 bacterium RIFOXYA1_FULL_42_9 [MEVQ] 35413 35338 - Arg GCG [ENA]
>W1711396674 MEVR01000012 Unclassified candidate division WWE3 bacterium RIFOXYA12_FULL_43_11 [MEVR] 8891 8966 + Arg GCG [ENA]
>W1711396718 MEVS01000020 Unclassified candidate division WWE3 bacterium RIFOXYA2_FULL_43_12 [MEVS] 34468 34393 - Arg GCG [ENA]
>W1711396844 MEVV01000016 Unclassified candidate division WWE3 bacterium RIFOXYB1_FULL_42_27 [MEVV] 2366 2291 - Arg GCG [ENA]
>W1711396914 MEVX01000015 Unclassified candidate division WWE3 bacterium RIFOXYB1_FULL_43_24 [MEVX] 30001 30076 + Arg GCG [ENA]
>W1711396979 MEVZ01000009 Unclassified candidate division WWE3 bacterium RIFOXYB2_FULL_43_9 [MEVZ] 10891 10816 - Arg GCG [ENA]
>W1711397111 MEWC01000015 Unclassified candidate division WWE3 bacterium RIFOXYC1_FULL_42_13 [MEWC] 31172 31247 + Arg GCG [ENA]
>W1711397133 MEWD01000001 Unclassified candidate division WWE3 bacterium RIFOXYC1_FULL_42_17 [MEWD] 8360 8285 - Arg GCG [ENA]
>W1711397360 MEWI01000007 Unclassified candidate division WWE3 bacterium RIFOXYD1_FULL_42_24 [MEWI] 73421 73346 - Arg GCG [ENA]
>W1711397395 MEWJ01000035 Unclassified candidate division WWE3 bacterium RIFOXYD1_FULL_43_17 [MEWJ] 13930 13855 - Arg GCG [ENA]
>WENV170971527 MTKX01006895 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 106 31 - Arg GCG [ENA]
>WENV170979506 MTKZ01094240 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1478 1403 - Arg GCG [ENA]
>C151014558 CP006914 Unclassified candidate division WWE3 bacterium RAAC2_WWE3_1 [CP006914] 715669 715744 + Arg GCG -
>SRA1030307 SRR035087.259994 454 Sequencing (SRP001808) 353 278 - Arg GCG [SRA]
>W1511606116 LCBB01000007 Unclassified candidate division WWE3 bacterium GW2011_GWC2_41_23 [LCBB] 29578 29503 - Arg GCG [ENA]
>W1511606397 LCBK01000004 Unclassified candidate division WWE3 bacterium GW2011_GWF2_41_45 [LCBK] 39745 39670 - Arg GCG [ENA]
>W1511606867 LCBZ01000010 Unclassified candidate division WWE3 bacterium GW2011_GWE1_41_72 [LCBZ] 23963 24038 + Arg GCG [ENA]
>W1511607174 LCCK01000006 Unclassified candidate division WWE3 bacterium GW2011_GWD2_42_11 [LCCK] 24021 24096 + Arg GCG [ENA]
>W1511607223 LCCL01000008 Unclassified candidate division WWE3 bacterium GW2011_GWB1_42_117 [LCCL] 63008 62933 - Arg GCG [ENA]
>W1511607257 LCCM01000007 Unclassified candidate division WWE3 bacterium GW2011_GWA1_42_12 [LCCM] 67884 67809 - Arg GCG [ENA]
>W1511607506 LCCU01000007 Unclassified candidate division WWE3 bacterium GW2011_GWF1_42_14 [LCCU] 8703 8628 - Arg GCG [ENA]
>W1511607610 LCCX01000006 Unclassified candidate division WWE3 bacterium GW2011_GWE1_42_16 [LCCX] 2829 2754 - Arg GCG [ENA]
>W1511608026 LCDK01000007 Unclassified candidate division WWE3 bacterium GW2011_GWE2_42_25 [LCDK] 73154 73079 - Arg GCG [ENA]
>W1511608404 LCDV01000027 Unclassified candidate division WWE3 bacterium GW2011_GWA1_42_46 [LCDV] 7365 7440 + Arg GCG [ENA]
>W1511608441 LCDW01000041 Unclassified Candidatus Collierbacteria bacterium GW2011_GWE2_42_48 bacterium GW2011_GWE2_42_48 [LCDW] 3993 3918 - Arg GCG [ENA]
>W1511608496 LCDZ01000006 Unclassified candidate division WWE3 bacterium GW2011_GWF1_42_51 [LCDZ] 2416 2341 - Arg GCG [ENA]
>W1511608856 LCEM01000015 Unclassified candidate division WWE3 bacterium GW2011_GWD1_42_70 [LCEM] 204 129 - Arg GCG [ENA]
>W1511610131 LCGA01000012 Unclassified candidate division WWE3 bacterium GW2011_GWF2_43_18 [LCGA] 15261 15186 - Arg GCG [ENA]
>W1511610309 LCGG01000005 Unclassified candidate division WWE3 bacterium GW2011_GWA2_43_24 [LCGG] 63117 63042 - Arg GCG [ENA]
>W1511611015 LCHD01000008 Unclassified candidate division WWE3 bacterium GW2011_GWA1_43_94 [LCHD] 63092 63017 - Arg GCG [ENA]
>W1511612467 LCIX01000006 Unclassified candidate division WWE3 bacterium GW2011_GWC1_44_308 [LCIX] 49941 49866 - Arg GCG [ENA]
>W1511612660 LCJF01000011 Unclassified candidate division WWE3 bacterium GW2011_GWE1_44_51 [LCJF] 4055 3980 - Arg GCG [ENA]
>W1511612931 LCJP01000015 Unclassified candidate division WWE3 bacterium GW2011_GWC2_44_85 [LCJP] 4055 3980 - Arg GCG [ENA]
Identical group No.290291 (5 seq.)
>WENV170955075 MJUJ01009113 [MJUJ] soil metagenome; viral particles from soil sample CN 312 239 - Arg GCG [ENA]
>SRA1032373 SRR035087.616016 454 Sequencing (SRP001808) 113 188 + Arg GCG [SRA]
>W1511598660 LBRH01000066 Unclassified Candidatus Moranbacteria bacterium GW2011_GWD2_36_12 bacterium GW2011_GWD2_36_12 [LBRH] 4888 4963 + Arg GCG [ENA]
>W1511599093 LBRX01000055 Unclassified Candidatus Moranbacteria bacterium GW2011_GWE2_36_40 bacterium GW2011_GWE2_36_40 [LBRX] 4869 4944 + Arg GCG [ENA]
>W1511599337 LBSG01000083 Unclassified Candidatus Moranbacteria bacterium GW2011_GWE1_36_7 bacterium GW2011_GWE1_36_7 [LBSG] 4879 4954 + Arg GCG [ENA]
Identical group No.302885 (1 seq.)
>SRA1030657 SRR035087.310414 454 Sequencing (SRP001808) 103 28 - Arg GCG [SRA]
Identical group No.302936 (1 seq.)
>SRA1031021 SRR035087.361045 454 Sequencing (SRP001808) 117 190 + Arg GCG [SRA]
Identical group No.303052 (1 seq.)
>SRA1032016 SRR035087.533261 454 Sequencing (SRP001808) 207 279 + Arg GCG [SRA]
Identical group No.412699 (1 seq.)
>SRA1029063 SRR035087.68268 454 Sequencing (SRP001808) 240 314 + Arg GCG [SRA]
Identical group No.412800 (1 seq.)
>SRA1030005 SRR035087.215196 454 Sequencing (SRP001808) 321 247 - Arg GCG [SRA]
Identical group No.412821 (4 seq.)
>WENV170626927 FUWD013230125 [FUWD] metagenome; unknown 5000 4926 - Arg GCG [ENA]
>WENV170630193 FUWD013298004 [FUWD] metagenome; unknown 7229 7303 + Arg GCG [ENA]
>SRA1030164 SRR035087.236054 454 Sequencing (SRP001808) 170 96 - Arg GCG [SRA]
>SRA1031965 SRR035087.521813 454 Sequencing (SRP001808) 273 347 + Arg GCG [SRA]
Identical group No.412941 (2 seq.)
>SRA1018570 SRR035082.312606 454 Sequencing (SRP001803) 415 343 - Arg GCG [SRA]
>SRA1031279 SRR035087.405965 454 Sequencing (SRP001808) 227 153 - Arg GCG [SRA]
Identical group No.412991 (5 seq.)
>WENV170612662 FUWD012653549 [FUWD] metagenome; unknown 264 337 + Arg GCG [ENA]
>SRA1017949 SRR035082.218806 454 Sequencing (SRP001803) 26 99 + Arg GCG [SRA]
>SRA1018105 SRR035082.241239 454 Sequencing (SRP001803) 130 203 + Arg GCG [SRA]
>SRA1031835 SRR035087.496807 454 Sequencing (SRP001808) 217 144 - Arg GCG [SRA]
>SRA1044517 SRR035092.292750 454 Sequencing (SRP001813) 264 337 + Arg GCG [SRA]
Identical group No.412993 (6 seq.)
>WENV170612645 FUWD012650165 [FUWD] metagenome; unknown 163 235 + Arg GCG [ENA]
>SRA1018226 SRR035082.258337 454 Sequencing (SRP001803) 137 209 + Arg GCG [SRA]
>SRA1031901 SRR035087.508952 454 Sequencing (SRP001808) 318 244 - Arg GCG [SRA]
>SRA1041596 SRR035091.267892 454 Sequencing (SRP001812) 305 379 + Arg GCG [SRA]
>SRA1044131 SRR035092.228757 454 Sequencing (SRP001813) 169 241 + Arg GCG [SRA]
>SRA1047906 SRR035094.65164 454 Sequencing (SRP001815) 27 101 + Arg GCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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