tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001808)

Anticodon = TCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.475 (16 seq.)
>W1711423139 MICJ01000060 Thermodesulfobacteriota Syntrophobacterales bacterium GWC2_56_13 [MICJ] 11012 10915 - SeC(p) TCA [ENA]
>WENV180098233 MTBK01235062 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 22656 22753 + SeC TCA [ENA]
>WENV181231037 OFEK01008395 [OFEK] activated sludge metagenome; Anaerobic digester 140 237 + SeC TCA [ENA]
>WENV181413069 OGCK01025084 [OGCK] hot springs metagenome; hot spring sediment 824 921 + SeC TCA [ENA]
>WENV183514110 OMKS01012035 [OMKS] sediment metagenome; hot spring sediment 2803 2900 + SeC TCA [ENA]
>WENV170598384 FUWD010033747 [FUWD] metagenome; unknown 539 442 - SeC(p) TCA [ENA]
>WENV170624228 FUWD013178104 [FUWD] metagenome; unknown 2327 2424 + SeC(p) TCA [ENA]
>WENV170632510 FUWD013383714 [FUWD] metagenome; unknown 2327 2424 + SeC(p) TCA [ENA]
>SRA1025764 SRR035085.79407 454 Sequencing (SRP001806) 128 225 + SeC TCA [SRA]
>SRA1029380 SRR035087.119274 454 Sequencing (SRP001808) 46 143 + SeC TCA [SRA]
>SRA1031222 SRR035087.394880 454 Sequencing (SRP001808) 123 26 - SeC TCA [SRA]
>SRA1034291 SRR035089.50464 454 Sequencing (SRP001810) 202 299 + SeC TCA [SRA]
>SRA1035179 SRR035089.253968 454 Sequencing (SRP001810) 143 46 - SeC TCA [SRA]
>SRA1035659 SRR035089.350986 454 Sequencing (SRP001810) 229 132 - SeC TCA [SRA]
>SRA1036283 SRR035089.487651 454 Sequencing (SRP001810) 84 181 + SeC TCA [SRA]
>SRA1036415 SRR035089.515898 454 Sequencing (SRP001810) 149 52 - SeC TCA [SRA]
Identical group No.568 (3 seq.)
>W1711315138 MAVP01000154 Thermodesulfobacteriota Desulfobacterales bacterium S7086C20 [MAVP] 5142 5045 - SeC(p) TCA [ENA]
>WENV183514995 OMKS01041038 [OMKS] sediment metagenome; hot spring sediment 880 977 + SeC TCA [ENA]
>SRA1029378 SRR035087.118934 454 Sequencing (SRP001808) 151 248 + SeC TCA [SRA]
Identical group No.569 (17 seq.)
>WENV180072713 MPMA02035929 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 536 439 - SeC TCA [ENA]
>WENV180079639 MPMB02173328 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 707 610 - SeC TCA [ENA]
>WENV180099274 NKAJ01001227 [NKAJ] marine sediment metagenome; Jiulong cold seep at northern South China Sea 10193 10290 + SeC TCA [ENA]
>WENV180099340 NKAJ01001924 [NKAJ] marine sediment metagenome; Jiulong cold seep at northern South China Sea 11824 11921 + SeC TCA [ENA]
>WENV180346386 OBLN01081927 [OBLN] sediment metagenome; sediment 353 450 + SeC TCA [ENA]
>W08005969 ABII01000030 Thermodesulfobacteriota Desulfatibacillum alkenivorans AK-01 [ABII] 71479 71576 + SeC TCA [ENA]
>WENV183806342 PVBE011107902 [PVBE] marine metagenome; water 17371 17274 - SeC TCA [ENA]
>WENV170203984 CEPS01098510 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 268 171 - SeC(p) TCA [ENA]
>WENV170209896 CEPV01091899 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 268 171 - SeC(p) TCA [ENA]
>WENV170225801 CEQE01148920 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 268 171 - SeC(p) TCA [ENA]
>WENV170384540 CETX01314827 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2222 2319 + SeC(p) TCA [ENA]
>WENV170692637 LGOV01018230 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 996 899 - SeC(p) TCA [ENA]
>WENV170696297 LGVF01010133 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 250 153 - SeC(p) TCA [ENA]
>C09103662 CP001322 Thermodesulfobacteriota Desulfatibacillum aliphaticivorans AK-01 [CP001322] 3391163 3391260 + SeC TCA [Ensembl]
>W1810084686 PESK01000025 Thermodesulfobacteriota Desulfofaba hansenii P1 [PESK] 24658 24755 + Sec TCA [ENA]
>SRA1030024 SRR035087.218062 454 Sequencing (SRP001808) 324 421 + SeC TCA [SRA]
>SRA1050105 SRR035095.192758 454 Sequencing (SRP001816) 368 271 - SeC TCA [SRA]
Identical group No.196235 (2 seq.)
>WENV183706435 PDWI01004207 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 9527 9600 + Sup TCA [ENA]
>SRA1030142 SRR035087.233007 454 Sequencing (SRP001808) 19 92 + SeC TCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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